Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35340 Brassica carinata HOM05D000013 ORTHO05D094147 6.5e-57 223.8 110 100.0
A05p33440 Brassica napus HOM05D000013 ORTHO05D000011 7.1e-27 124.0 70 87.1
BcaB06g25699 Brassica carinata HOM05D000013 ORTHO05D000011 7.3e-24 114.0 92 65.2
BraA05t22168Z Brassica rapa HOM05D000013 ORTHO05D000011 2.1e-23 112.5 63 87.3
BcaC05g28918 Brassica carinata HOM05D000013 ORTHO05D000011 6.4e-20 100.9 63 84.1
C05p50440 Brassica napus HOM05D000013 ORTHO05D000011 6.4e-20 100.9 63 84.1
BolC5t33790H Brassica oleracea HOM05D000013 ORTHO05D000011 6.4e-20 100.9 63 84.1
Sp3g14380 Schrenkiella parvula HOM05D000013 ORTHO05D000011 1.2e-18 96.7 63 79.4
BraA01t03865Z Brassica rapa HOM05D000013 ORTHO05D000011 6.0e-18 94.4 63 74.6
C01p48290 Brassica napus HOM05D000013 ORTHO05D000011 1.0e-17 93.6 63 73.0
BraA03t13457Z Brassica rapa HOM05D000013 ORTHO05D000011 1.7e-17 92.8 56 82.1
BcaB04g20879 Brassica carinata HOM05D000013 ORTHO05D000011 5.1e-17 91.3 63 73.0
A03p43160 Brassica napus HOM05D000013 ORTHO05D000011 6.6e-17 90.9 56 80.4
C03p53010 Brassica napus HOM05D000013 ORTHO05D000011 1.5e-16 89.7 58 75.9
BcaB04g17458 Brassica carinata HOM05D004376 ORTHO05D005304 3.3e-16 88.6 45 95.6
BcaC01g03391 Brassica carinata HOM05D000013 ORTHO05D000011 5.6e-16 87.8 58 75.9
BolC3t17565H Brassica oleracea HOM05D000013 ORTHO05D000011 5.6e-16 87.8 58 75.9
Carub.0002s1386 Capsella rubella HOM05D000013 ORTHO05D000011 3.1e-14 82.0 57 75.4
CARHR179370 Cardamine hirsuta HOM05D000013 ORTHO05D000011 3.4e-13 78.6 45 82.2
AL2G26120 Arabidopsis lyrata HOM05D000013 ORTHO05D000011 2.1e-10 69.3 41 80.5
CARHR179310 Cardamine hirsuta HOM05D000013 ORTHO05D000011 3.9e-09 65.1 63 60.3
BcaB03g14632 Brassica carinata HOM05D000013 ORTHO05D000011 3.3e-08 62.0 33 87.9
THA.LOC104817990 Tarenaya hassleriana HOM05D000013 ORTHO05D000011 5.6e-08 61.2 57 59.6
Ciclev10024887m.g Citrus clementina HOM05D000013 ORTHO05D000011 1.4e-06 56.6 48 56.2
ECA247G1293 Erigeron canadensis HOM05D000013 ORTHO05D000011 5.3e-06 54.7 59 50.8


User provided reference genes

Program Settings