Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35303 Brassica carinata HOM05D000144 ORTHO05D007858 1.4e-53 212.6 102 100.0
A01p05130 Brassica napus HOM05D000144 ORTHO05D007858 1.5e-42 176.0 94 87.2
BraA01t00496Z Brassica rapa HOM05D000144 ORTHO05D007858 3.2e-42 174.9 94 86.2
BcaC09g52104 Brassica carinata HOM05D000144 ORTHO05D007858 5.5e-42 174.1 94 87.2
C01p05610 Brassica napus HOM05D000144 ORTHO05D007858 5.5e-42 174.1 94 87.2
BolC1t00541H Brassica oleracea HOM05D000144 ORTHO05D007858 3.6e-41 171.4 94 85.1
BcaB01g04144 Brassica carinata HOM05D000144 ORTHO05D007858 4.0e-40 167.9 91 87.9
Thhalv10025014m.g Eutrema salsugineum HOM05D000144 ORTHO05D007858 2.6e-39 165.2 94 83.0
Sp7g30820 Schrenkiella parvula HOM05D000144 ORTHO05D007858 5.7e-39 164.1 94 84.0
Carub.0007s0739 Capsella rubella HOM05D000144 ORTHO05D007858 7.5e-39 163.7 94 83.0
AL7G18520 Arabidopsis lyrata HOM05D000144 ORTHO05D007858 3.7e-38 161.4 94 81.9
AT4G33060 Arabidopsis thaliana HOM05D000144 ORTHO05D007858 4.8e-38 161.0 94 80.9
CARHR241070 Cardamine hirsuta HOM05D000144 ORTHO05D007858 1.2e-36 156.4 94 78.7
THA.LOC104811050 Tarenaya hassleriana HOM05D000144 ORTHO05D007858 3.0e-32 141.7 95 72.6
VMungo0647G2473 Vigna mungo HOM05D000144 ORTHO05D007858 7.0e-29 130.6 96 69.8
Migut.A00110 Erythranthe guttata HOM05D000144 ORTHO05D007858 1.2e-28 129.8 94 67.0
SGA_v2.0_scaffold20G09201 Striga asiatica HOM05D000144 ORTHO05D007858 1.2e-28 129.8 94 64.9
PSO210G0248 Papaver somniferum HOM05D000144 ORTHO05D007858 2.0e-28 129.0 95 64.2
Atru.chr7.1929 Acer truncatum HOM05D000144 ORTHO05D007858 2.7e-28 128.6 95 66.3
Gohir.A06G085500 Gossypium hirsutum HOM05D000144 ORTHO05D007858 2.7e-28 128.6 95 66.3
Gohir.D06G084800 Gossypium hirsutum HOM05D000144 ORTHO05D007858 2.7e-28 128.6 95 66.3
Gorai.010G098200 Gossypium raimondii HOM05D000144 ORTHO05D007858 2.7e-28 128.6 95 66.3
Lalb_Chr14g0375501 Lupinus albus HOM05D000144 ORTHO05D007858 2.7e-28 128.6 96 63.5
SalBow4G0930 Salvia bowleyana HOM05D000144 ORTHO05D007858 2.7e-28 128.6 94 63.8
RcHm_v2.0_Chr6g0311311 Rosa chinensis HOM05D000144 ORTHO05D007858 3.5e-28 128.3 84 66.7
Aa31sc290G20 Aethionema arabicum HOM05D000144 ORTHO05D007858 4.5e-28 127.9 93 71.0
AUR62039153 Chenopodium quinoa HOM05D000144 ORTHO05D007858 4.5e-28 127.9 93 67.7
Hma1.2p1_0196F.1_g084850 Hydrangea macrophylla HOM05D000144 ORTHO05D007858 4.5e-28 127.9 95 62.1
Hma1.2p1_0196F.1_g084860 Hydrangea macrophylla HOM05D000144 ORTHO05D007858 4.5e-28 127.9 95 62.1
PSO210G1977 Papaver somniferum HOM05D000144 ORTHO05D007858 4.5e-28 127.9 95 63.2
arahy.Tifrunner.gnm1.ann1.K67LMX Arachis hypogaea HOM05D000144 ORTHO05D007858 5.9e-28 127.5 94 67.0
arahy.Tifrunner.gnm1.ann1.ZKP4WK Arachis hypogaea HOM05D000144 ORTHO05D007858 5.9e-28 127.5 94 67.0
COL.COLO4_21097 Corchorus olitorius HOM05D000144 ORTHO05D007858 5.9e-28 127.5 96 65.6
Phvul.001G045200 Phaseolus vulgaris HOM05D000144 ORTHO05D007858 5.9e-28 127.5 96 68.8
Psat1g180840 Pisum sativum HOM05D000144 ORTHO05D007858 5.9e-28 127.5 96 64.6
TPR.G9944 Trifolium pratense HOM05D000144 ORTHO05D007858 5.9e-28 127.5 96 64.6
EL10Ac2g03820 Beta vulgaris HOM05D000144 ORTHO05D007858 1.0e-27 126.7 94 66.0
AUR62009111 Chenopodium quinoa HOM05D000144 ORTHO05D007858 1.0e-27 126.7 94 67.0
Cc08_g10950 Coffea canephora HOM05D000144 ORTHO05D007858 1.0e-27 126.7 78 71.8
Duzib168G0360 Durio zibethinus HOM05D000144 ORTHO05D007858 1.0e-27 126.7 95 64.2
FvH4_2g31480 Fragaria vesca HOM05D000144 ORTHO05D007858 1.0e-27 126.7 96 63.5
CANSAT25G1581 Cannabis sativa HOM05D000144 ORTHO05D007858 1.3e-27 126.3 96 61.5
Ca_00658_v3 Cicer arietinum L. HOM05D000144 ORTHO05D007858 1.3e-27 126.3 96 62.5
Ciclev10008108m.g Citrus clementina HOM05D000144 ORTHO05D007858 1.3e-27 126.3 95 66.3
Sc06g0001040 Simmondsia chinensis HOM05D000144 ORTHO05D007858 1.3e-27 126.3 94 64.9
MSTRG.25969 Avicennia marina HOM05D000144 ORTHO05D007858 2.3e-27 125.6 94 64.9
Actinidia25710 Actinidia chinensis HOM05D000144 ORTHO05D007858 2.9e-27 125.2 96 66.7
FAN15G0369 Fragaria x ananassa HOM05D000144 ORTHO05D007858 2.9e-27 125.2 96 62.5
FAN20G1720 Fragaria x ananassa HOM05D000144 ORTHO05D007858 2.9e-27 125.2 96 62.5
Prupe.1G408500 Prunus persica HOM05D000144 ORTHO05D007858 2.9e-27 125.2 96 62.5
FAN24G0598 Fragaria x ananassa HOM05D000144 ORTHO05D007858 3.8e-27 124.8 85 69.4
MD15G1055400 Malus domestica HOM05D000144 ORTHO05D007858 5.0e-27 124.4 78 71.8
Peaxi162Scf00070g00028 Petunia axillaris HOM05D000144 ORTHO05D007858 5.0e-27 124.4 95 63.2
unitig_748.g7531 Utricularia gibba HOM05D000144 ORTHO05D007858 5.0e-27 124.4 83 72.3
Cpa.g.sc7.149 Carica papaya HOM05D000144 ORTHO05D007858 1.1e-26 123.2 102 63.7
Thecc.09G058100 Theobroma cacao HOM05D000144 ORTHO05D007858 1.5e-26 122.9 95 64.2
Lj5g0003534 Lotus japonicus HOM05D000144 ORTHO05D007858 1.9e-26 122.5 96 63.5
Ah.11g044400 Amaranthus hybridus HOM05D000144 ORTHO05D007858 2.5e-26 122.1 85 69.4
Sabra06G0174200 Salix brachista HOM05D000144 ORTHO05D007858 2.5e-26 122.1 95 63.2
Solyc08g062700.3 Solanum lycopersicum HOM05D000144 ORTHO05D007858 2.5e-26 122.1 72 75.0
Sopen08g018230 Solanum pennellii HOM05D000144 ORTHO05D007858 2.5e-26 122.1 72 75.0
Aqoxy7G04003 Aquilegia oxysepala HOM05D000144 ORTHO05D007858 3.3e-26 121.7 96 66.7
Glyma.17G218800 Glycine max HOM05D000144 ORTHO05D007858 3.3e-26 121.7 96 65.6
Nitab4.5_0003730g0080 Nicotiana tabacum HOM05D000144 ORTHO05D007858 3.3e-26 121.7 91 64.8
Potri.018G061700 Populus trichocarpa HOM05D000144 ORTHO05D007858 3.3e-26 121.7 96 63.5
Eucgr.C00671 Eucalyptus grandis HOM05D000144 ORTHO05D007858 4.2e-26 121.3 95 62.1
Hund03313 Selenicereus undatus HOM05D000144 ORTHO05D007858 4.2e-26 121.3 95 65.3
CSS0040828 Camellia sinensis var. sinensis HOM05D000144 ORTHO05D007858 5.5e-26 120.9 97 62.9
QL02p000650 Quercus lobata HOM05D000144 ORTHO05D007858 5.5e-26 120.9 96 63.5
Nitab4.5_0003458g0020 Nicotiana tabacum HOM05D000144 ORTHO05D007858 7.2e-26 120.6 91 64.8
Rhsim08G0158500 Rhododendron simsii HOM05D000144 ORTHO05D007858 9.5e-26 120.2 96 61.5
Manes.03G050500 Manihot esculenta HOM05D000144 ORTHO05D007858 1.2e-25 119.8 95 64.2
TWI34G0926 Tripterygium wilfordii HOM05D000144 ORTHO05D007858 1.2e-25 119.8 95 64.2
vmacro17526 Vaccinium macrocarpon HOM05D000144 ORTHO05D007858 1.6e-25 119.4 96 62.5
Dinv12442 Davidia involucrata HOM05D000144 ORTHO05D007858 2.1e-25 119.0 96 61.5
ECA240G1772 Erigeron canadensis HOM05D000144 ORTHO05D007858 2.8e-25 118.6 97 57.7
Medtr2g023120 Medicago truncatula HOM05D000144 ORTHO05D007858 2.8e-25 118.6 98 61.2
HPP92_022916 Vanilla planifolia HOM05D000144 ORTHO05D007858 2.8e-25 118.6 96 61.5
SHI18713 Sapria himalayana HOM05D000144 ORTHO05D007858 8.0e-25 117.1 83 61.4
MBI11_g29744_MAGBIO Magnolia biondii HOM05D000144 ORTHO05D007858 1.0e-24 116.7 96 59.4
Migut.J00024 Erythranthe guttata HOM05D000144 ORTHO05D007858 1.4e-24 116.3 73 71.2
Lj7A257G27 Lonicera japonica HOM05D000144 ORTHO05D007858 1.4e-24 116.3 81 61.7
Lsat_1_v5_gn_7_61241 Lactuca sativa HOM05D000144 ORTHO05D007858 1.8e-24 115.9 77 64.9
CDE02G3934 Ceratophyllum demersum HOM05D000144 ORTHO05D007858 2.3e-24 115.5 97 58.8
CAN.G56.1 Capsicum annuum HOM05D000144 ORTHO05D007858 3.0e-24 115.2 72 69.4
CiPaw.15G036300 Carya illinoinensis HOM05D000144 ORTHO05D007858 4.0e-24 114.8 96 59.4
Nn6g35544 Nelumbo nucifera HOM05D000144 ORTHO05D007858 4.0e-24 114.8 96 60.4
TAR626G1661 Trochodendron aralioides HOM05D000144 ORTHO05D007858 6.8e-24 114.0 96 59.4
CBR_g18892 Chara braunii HOM05D000144 ORTHO05D007858 8.9e-24 113.6 61 80.3
GSVIVG01035415001 Vitis vinifera HOM05D000144 ORTHO05D007858 8.9e-24 113.6 97 56.7
ATR0051G064 Amborella trichopoda HOM05D000144 ORTHO05D007858 2.0e-23 112.5 92 56.5
HanXRQChr09g0248311 Helianthus annuus HOM05D000144 ORTHO05D007858 2.0e-23 112.5 97 53.6
Os01g0582400 Oryza sativa ssp. japonica HOM05D000144 ORTHO05D007858 2.0e-23 112.5 90 61.1
Zm00001eb160460 Zea mays HOM05D000144 ORTHO05D007858 2.0e-23 112.5 94 63.8
Mapoly0120s0015 Marchantia polymorpha HOM05D000144 ORTHO05D007858 5.7e-23 110.9 94 58.5
AagrBONN_evm.TU.Sc2ySwM_228.3582 Anthoceros agrestis HOM05D000144 ORTHO05D007858 1.7e-22 109.4 86 64.0
ClCG05G018040 Citrullus lanatus HOM05D000144 ORTHO05D007858 1.7e-22 109.4 95 61.1
DCAR_007737 Daucus carota HOM05D000144 ORTHO05D007858 1.7e-22 109.4 72 61.1
Sed0010774 Sechium edule HOM05D000144 ORTHO05D007858 2.2e-22 109.0 95 62.1
CsaV3_4G035820 Cucumis sativus L. HOM05D000144 ORTHO05D007858 2.8e-22 108.6 95 60.0
Haze_18149 Corylus avellana HOM05D000144 ORTHO05D007858 3.7e-22 108.2 94 57.4
MD08G1066000 Malus domestica HOM05D000144 ORTHO05D007858 4.9e-22 107.8 96 59.4
MELO3C016887.2 Cucumis melo HOM05D000144 ORTHO05D007858 8.3e-22 107.1 95 58.9
Cfa017981 Carpinus fangiana HOM05D000144 ORTHO05D007858 1.4e-21 106.3 94 56.4
Pp3c19_19340 Physcomitrium patens HOM05D000144 ORTHO05D007858 5.4e-21 104.4 79 60.8
SMO201G0180 Selaginella moellendorffii HOM05D000144 ORTHO05D007858 1.6e-20 102.8 95 53.7
Oeu018620.1 Olea europaea HOM05D000144 ORTHO05D007858 5.9e-20 100.9 62 75.8
MCO09G594 Micromonas commoda HOM05D000144 ORTHO05D007858 1.5e-18 96.3 85 49.4
SEGI_10238 Sequoiadendron giganteum HOM05D000144 ORTHO05D007858 1.0e-16 90.1 50 72.0
Cre04.g215950 Chlamydomonas reinhardtii HOM05D000144 ORTHO05D007858 9.8e-15 83.6 73 47.9
Ca_00702_v3 Cicer arietinum L. HOM05D000144 ORTHO05D007858 3.7e-14 81.6 65 63.1
CDE02G2029 Ceratophyllum demersum HOM05D000144 ORTHO05D007858 4.9e-14 81.3 52 67.3
TWI63G0465 Tripterygium wilfordii HOM05D000144 ORTHO05D413898 7.8e-12 73.9 69 59.4
Haze_26949 Corylus avellana HOM05D000144 ORTHO05D007858 5.2e-08 61.2 75 42.7
Cfa025549 Carpinus fangiana HOM05D003409 ORTHO05D004015 3.4e-07 58.5 96 38.5
Rhsim10G0180800 Rhododendron simsii HOM05D000144 ORTHO05D002661 9.8e-07 57.0 49 55.1


User provided reference genes

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