Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35293 Brassica carinata HOM05D003554 ORTHO05D005130 1.3e-188 662.9 334 100.0
BcaB02g11541 Brassica carinata HOM05D003554 ORTHO05D005130 2.4e-150 535.8 319 86.5
BcaB03g16128 Brassica carinata HOM05D003554 ORTHO05D005130 3.8e-148 528.5 309 88.7
BcaB01g01280 Brassica carinata HOM05D003554 ORTHO05D005130 1.2e-141 506.9 310 86.1
BcaB04g17410 Brassica carinata HOM05D003554 ORTHO05D005130 1.7e-140 503.1 322 83.2
BcaC03g16254 Brassica carinata HOM05D003554 ORTHO05D005130 5.7e-136 488.0 317 83.0
BcaB05g23503 Brassica carinata HOM05D003554 ORTHO05D008395 9.8e-72 274.6 149 90.6
Carub.0007s3074 Capsella rubella HOM05D003554 ORTHO05D005130 3.4e-64 249.6 307 45.0
BcaB02g11090 Brassica carinata HOM05D003554 ORTHO05D008395 7.3e-51 205.3 140 80.7
Carub.0002s1014 Capsella rubella HOM05D003554 ORTHO05D005130 1.6e-50 204.1 288 40.6
Carub.0001s3566 Capsella rubella HOM05D003554 ORTHO05D005130 8.9e-49 198.4 307 40.7
Carub.0006s2609 Capsella rubella HOM05D003554 ORTHO05D005130 3.4e-48 196.4 292 41.8
Carub.0007s0014 Capsella rubella HOM05D003554 ORTHO05D005130 2.9e-47 193.4 292 41.8
Aa31sc111G40 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.2e-46 189.9 295 36.9
Carub.0002s1016 Capsella rubella HOM05D003554 ORTHO05D005130 3.2e-46 189.9 219 46.1
Carub.0004s0685 Capsella rubella HOM05D003554 ORTHO05D005130 3.2e-46 189.9 321 37.7
Carub.0278s0001 Capsella rubella HOM05D003554 ORTHO05D005130 1.3e-44 184.5 306 38.6
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 3.9e-44 183.0 265 39.6
Aa31LG10G9040 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.5e-43 181.0 287 39.0
Carub.0002s0995 Capsella rubella HOM05D003554 ORTHO05D005130 1.3e-42 177.9 290 39.7
C02p33250 Brassica napus HOM05D003554 ORTHO05D005130 2.8e-42 176.8 208 46.6
Carub.0002s0983 Capsella rubella HOM05D003554 ORTHO05D005130 8.1e-42 175.3 207 44.9
Carub.0002s0984 Capsella rubella HOM05D003554 ORTHO05D005130 6.9e-41 172.2 293 38.6
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 5.8e-40 169.1 294 38.4
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 1.2e-37 161.4 220 40.0
Aa31sc129G60 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.7e-37 160.2 276 35.9
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 3.5e-37 159.8 294 36.1
Carub.0003s3367 Capsella rubella HOM05D003554 ORTHO05D005130 4.6e-37 159.5 296 36.1
C05p37400 Brassica napus HOM05D003554 ORTHO05D005130 6.0e-37 159.1 216 40.3
Carub.0003s2756 Capsella rubella HOM05D003554 ORTHO05D005130 7.9e-37 158.7 291 38.1
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 1.1e-35 154.8 309 35.3
AL1G56530 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 9.6e-35 151.8 223 38.1
AL1G56540 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 9.6e-35 151.8 223 38.1
BcaB08g35337 Brassica carinata HOM05D003554 ORTHO05D005130 8.1e-34 148.7 337 34.1
BcaC08g42899 Brassica carinata HOM05D003554 ORTHO05D005130 9.0e-33 145.2 292 33.6
BolC9t56577H Brassica oleracea HOM05D004128 ORTHO05D008395 2.6e-32 143.7 178 46.1
Aa31sc347G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.4e-32 143.3 212 39.2
Aa31LG6G10050 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.3e-31 141.4 296 32.4
BcaB02g11366 Brassica carinata HOM05D007984 ORTHO05D013027 3.2e-30 136.7 291 35.4
BcaB08g35391 Brassica carinata HOM05D003554 ORTHO05D005130 2.7e-29 133.7 297 32.7
BcaB02g10637 Brassica carinata HOM05D003554 ORTHO05D005130 1.0e-28 131.7 182 38.5
BolC3t19531H Brassica oleracea HOM05D003554 ORTHO05D005130 2.3e-28 130.6 155 45.8
BcaB07g31822 Brassica carinata HOM05D003554 ORTHO05D032345 5.1e-28 129.4 308 32.5
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 2.5e-27 127.1 168 38.7
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 2.5e-27 127.1 184 38.0
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 2.5e-27 127.1 238 36.1
AL2G17330 Arabidopsis lyrata HOM05D003554 ORTHO05D008395 3.3e-27 126.7 281 31.3
Aa31LG6G9970 Aethionema arabicum HOM05D003554 ORTHO05D005130 4.3e-27 126.3 287 32.8
BcaB01g02862 Brassica carinata HOM05D003554 ORTHO05D005130 4.3e-27 126.3 165 43.0
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 4.3e-27 126.3 151 45.7
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 4.3e-27 126.3 151 45.7
Aa31LG11G8070 Aethionema arabicum HOM05D003554 ORTHO05D005130 9.6e-27 125.2 198 35.9
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 1.6e-26 124.4 282 30.5
BcaB07g33411 Brassica carinata HOM05D003554 ORTHO05D008395 2.8e-26 123.6 104 73.1
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 4.0e-25 119.8 180 40.0
BcaB04g17902 Brassica carinata HOM05D003554 ORTHO05D005130 1.2e-24 118.2 183 39.3
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 2.6e-24 117.1 184 37.0
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 2.6e-24 117.1 251 31.5
Aa31LG1G6440 Aethionema arabicum HOM05D003554 ORTHO05D005130 5.8e-24 115.9 221 33.0
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 1.0e-23 115.2 184 36.4
Aa31LG6G9990 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.2e-23 114.0 138 42.0
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 2.2e-23 114.0 225 36.0
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 3.8e-23 113.2 184 35.3
BcaC05g27750 Brassica carinata HOM05D008825 ORTHO05D013031 1.4e-22 111.3 219 34.7
BcaB07g32749 Brassica carinata HOM05D008316 ORTHO05D013031 9.3e-22 108.6 224 34.8
Aa31sc454G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.1e-21 107.5 157 42.0
AT5G24275 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 3.5e-21 106.7 176 37.5
Aa31LG10G9030 Aethionema arabicum HOM05D003554 ORTHO05D008395 6.0e-21 105.9 219 33.8
BolC3t13324H Brassica oleracea HOM05D003554 ORTHO05D008395 7.9e-21 105.5 198 31.8
THA.LOC104803192 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.0e-20 105.1 206 31.1
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-20 104.8 155 36.8
THA.LOC109116563 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.8e-20 104.4 276 27.5
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 6.7e-20 102.4 127 45.7
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 6.7e-20 102.4 155 36.1
BcaB06g26193 Brassica carinata HOM05D003554 ORTHO05D014926 1.1e-19 101.7 193 38.9
Aa31sc538G10 Aethionema arabicum HOM05D003554 ORTHO05D008395 2.5e-19 100.5 146 41.1
BcaB01g01146 Brassica carinata HOM05D003554 ORTHO05D005130 4.3e-19 99.8 295 28.8
THA.LOC109117170 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 7.4e-19 99.0 206 31.6
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 1.6e-18 97.8 215 33.0
THA.LOC104807874 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.8e-18 97.1 190 31.6
THA.LOC104811336 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.7e-18 96.7 191 31.4
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 4.8e-18 96.3 201 33.3
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 6.3e-18 95.9 234 31.2
BcaC01g01745 Brassica carinata HOM05D003554 ORTHO05D014926 1.1e-17 95.1 192 35.9
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 1.8e-17 94.4 196 33.2
CARHR049310 Cardamine hirsuta HOM05D003554 ORTHO05D005130 1.5e-16 91.3 90 51.1
C05p06190 Brassica napus HOM05D003554 ORTHO05D005130 2.0e-16 90.9 97 49.5
BcaC01g02197 Brassica carinata HOM05D003554 ORTHO05D014926 2.6e-16 90.5 206 35.9
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 3.4e-16 90.1 253 28.5
Thhalv10000512m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 3.4e-16 90.1 82 50.0
BcaB03g16118 Brassica carinata HOM05D003554 ORTHO05D005130 1.0e-15 88.6 181 34.3
Aa31sc182G60 Aethionema arabicum HOM05D003554 ORTHO05D008395 1.3e-15 88.2 188 33.5
BNapus_Darmor_BZH_scaffold_167p00060 Brassica napus HOM05D003554 ORTHO05D005130 1.7e-15 87.8 99 47.5
BcaB05g24479 Brassica carinata HOM05D008316 ORTHO05D017243 3.8e-15 86.7 288 28.8
C03p67190 Brassica napus HOM05D003554 ORTHO05D005130 3.8e-15 86.7 104 43.3
C06p00220 Brassica napus HOM05D003554 ORTHO05D005130 3.8e-15 86.7 104 43.3
BolC5t32273H Brassica oleracea HOM05D003554 ORTHO05D005130 3.8e-15 86.7 104 43.3
THA.LOC104799670 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.5e-14 84.0 171 30.4
BcaC01g04710 Brassica carinata HOM05D008825 ORTHO05D013031 4.2e-14 83.2 198 31.8
BcaC04g20884 Brassica carinata HOM05D009532 ORTHO05D013511 4.2e-14 83.2 180 31.7
BraA07t28446Z Brassica rapa HOM05D003554 ORTHO05D005130 4.2e-14 83.2 104 41.3
AT2G06420 Arabidopsis thaliana HOM05D003554 ORTHO05D005130 5.5e-14 82.8 107 43.0
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 5.5e-14 82.8 175 34.3
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 1.6e-13 81.3 160 36.2
THA.LOC109116427 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.6e-13 81.3 239 30.5
BcaB02g11054 Brassica carinata HOM05D009532 ORTHO05D005130 2.1e-13 80.9 150 34.7
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 2.1e-13 80.9 173 35.8
A07p06510 Brassica napus HOM05D003554 ORTHO05D005130 2.7e-13 80.5 104 40.4
Sp7g02635 Schrenkiella parvula HOM05D003554 ORTHO05D005130 2.7e-13 80.5 63 55.6
BcaC08g43125 Brassica carinata HOM05D009532 ORTHO05D013511 6.1e-13 79.3 180 31.1
C04p39160 Brassica napus HOM05D004128 ORTHO05D008395 7.9e-13 79.0 119 37.0
BcaC08g45828 Brassica carinata HOM05D003554 ORTHO05D014926 1.3e-12 78.2 121 38.8
C02p14940 Brassica napus HOM05D008316 ORTHO05D021631 2.3e-12 77.4 135 31.9
C02p57980 Brassica napus HOM05D017905 ORTHO05D017243 2.3e-12 77.4 124 39.5
BcaB03g16082 Brassica carinata HOM05D026233 ORTHO05D005130 3.9e-12 76.6 83 48.2
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 3.9e-12 76.6 164 32.9
Aa31LG5G24000 Aethionema arabicum HOM05D003554 ORTHO05D005130 6.7e-12 75.9 69 46.4
BcaC01g00316 Brassica carinata HOM05D003554 ORTHO05D014926 8.7e-12 75.5 197 33.0
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 8.7e-12 75.5 175 33.1
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 8.7e-12 75.5 175 32.6
Carub.0005s0863 Capsella rubella HOM05D003554 ORTHO05D005130 1.5e-11 74.7 89 43.8
Aa31sc318G10 Aethionema arabicum HOM05D028239 ORTHO05D005130 1.9e-11 74.3 103 36.9
THA.LOC104807864 Tarenaya hassleriana HOM05D003554 ORTHO05D015748 1.9e-11 74.3 231 26.0
THA.LOC104809668 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.5e-11 73.9 221 30.3
BcaC08g45909 Brassica carinata HOM05D003554 ORTHO05D014926 3.3e-11 73.6 186 32.8
A02p27360 Brassica napus HOM05D011584 ORTHO05D016702 4.3e-11 73.2 48 83.3
BraA02t07764Z Brassica rapa HOM05D011584 ORTHO05D016702 4.3e-11 73.2 48 83.3
BcaC03g13667 Brassica carinata HOM05D007984 ORTHO05D039917 5.7e-11 72.8 192 33.3
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 9.7e-11 72.0 94 46.8
Aa31sc471G30 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.3e-10 71.6 125 34.4
Aa31sc151G30 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.6e-10 71.2 78 39.7
BcaB02g11423 Brassica carinata HOM05D003554 ORTHO05D014926 1.6e-10 71.2 199 27.1
BcaB02g10972 Brassica carinata HOM05D003554 ORTHO05D014926 2.2e-10 70.9 157 33.1
C08p06800 Brassica napus HOM05D003554 ORTHO05D005130 2.2e-10 70.9 96 42.7
THA.LOC104820187 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.8e-10 70.5 179 29.1
Aa31LG7G10730 Aethionema arabicum HOM05D003554 ORTHO05D008395 4.8e-10 69.7 143 38.5
Aa31LG9G11090 Aethionema arabicum HOM05D011111 ORTHO05D001112 4.8e-10 69.7 70 45.7
Aa31sc45G30 Aethionema arabicum HOM05D003554 ORTHO05D005130 6.3e-10 69.3 68 44.1
BolC3t17148H Brassica oleracea HOM05D014471 ORTHO05D017646 6.3e-10 69.3 103 43.7
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 6.3e-10 69.3 95 37.9
THA.LOC104798881 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 6.3e-10 69.3 118 31.4
THA.LOC104807807 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.2e-10 68.9 123 30.1
THA.LOC109116460 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.2e-10 68.9 132 32.6
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 1.1e-09 68.6 96 38.5
THA.LOC104800374 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.1e-09 68.6 169 29.6
BcaB08g34926 Brassica carinata HOM05D007984 ORTHO05D013027 1.8e-09 67.8 121 39.7
C02p40540 Brassica napus HOM05D007984 ORTHO05D014515 5.3e-09 66.2 105 44.8
BcaB07g33249 Brassica carinata HOM05D026233 ORTHO05D005130 6.9e-09 65.9 152 34.9
BcaB08g35153 Brassica carinata HOM05D007984 ORTHO05D013027 6.9e-09 65.9 220 30.9
BolC2t10066H Brassica oleracea HOM05D011584 ORTHO05D016702 1.2e-08 65.1 46 78.3
THA.LOC104821166 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.0e-08 64.3 175 26.9
Oeu031011.1 Olea europaea HOM05D000700 ORTHO05D000397 3.4e-08 63.5 127 30.7
Aa31sc137G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.0e-07 62.0 87 36.8
Oeu062254.1 Olea europaea HOM05D000700 ORTHO05D000397 1.0e-07 62.0 173 28.9
THA.LOC109116278 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.0e-07 62.0 221 27.1
BcaB05g25144 Brassica carinata HOM05D008316 ORTHO05D005130 1.3e-07 61.6 125 32.0
BcaC09g49342 Brassica carinata HOM05D008316 ORTHO05D005130 1.3e-07 61.6 125 32.0
C08p07220 Brassica napus HOM05D008316 ORTHO05D017243 1.3e-07 61.6 87 39.1
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-07 61.2 167 31.7
BolC4t23182H Brassica oleracea HOM05D003554 ORTHO05D005130 5.0e-07 59.7 58 55.2
THA.LOC104798704 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.0e-07 59.7 96 31.2
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 8.5e-07 58.9 169 29.0
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 8.5e-07 58.9 197 26.4
BcaB06g28000 Brassica carinata HOM05D009532 ORTHO05D005130 1.1e-06 58.5 74 43.2
BraA09t38864Z Brassica rapa HOM05D003554 ORTHO05D017243 1.4e-06 58.2 70 42.9
BcaB05g23871 Brassica carinata HOM05D007984 ORTHO05D013027 1.9e-06 57.8 121 34.7
BcaC01g00119 Brassica carinata HOM05D003554 ORTHO05D014926 1.9e-06 57.8 158 31.6
MELO3C028279.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.9e-06 57.8 109 33.0
BcaC03g17046 Brassica carinata HOM05D003554 ORTHO05D039837 2.5e-06 57.4 143 29.4
BraA05t21895Z Brassica rapa HOM05D004128 ORTHO05D008395 2.5e-06 57.4 52 48.1
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 3.2e-06 57.0 156 32.1
Sp7g04330 Schrenkiella parvula HOM05D003554 ORTHO05D032345 4.2e-06 56.6 84 34.5
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 5.5e-06 56.2 155 31.0
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 7.2e-06 55.8 156 32.1
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 7.2e-06 55.8 156 32.1
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 7.2e-06 55.8 142 32.4


User provided reference genes

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