Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35285 Brassica carinata HOM05D004342 ORTHO05D011040 1.4e-158 562.8 264 100.0
BcaB01g02102 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-155 553.1 264 98.1
BcaB06g27914 Brassica carinata HOM05D004342 ORTHO05D011040 9.9e-152 540.0 265 96.2
BcaB05g23453 Brassica carinata HOM05D004342 ORTHO05D011040 2.2e-151 538.9 264 95.8
BcaB06g27477 Brassica carinata HOM05D004342 ORTHO05D011040 5.1e-140 501.1 264 91.3
BcaB08g35544 Brassica carinata HOM05D004342 ORTHO05D011040 3.3e-139 498.4 264 90.5
BcaB03g16622 Brassica carinata HOM05D004342 ORTHO05D011040 4.0e-137 491.5 264 89.4
BcaB02g10664 Brassica carinata HOM05D004342 ORTHO05D011040 3.4e-136 488.4 264 89.0
BcaB07g33971 Brassica carinata HOM05D004342 ORTHO05D011040 3.0e-132 475.3 254 89.8
BcaB02g06560 Brassica carinata HOM05D004342 ORTHO05D011040 3.9e-132 474.9 270 84.8
BcaB04g18145 Brassica carinata HOM05D004342 ORTHO05D011040 3.4e-128 461.8 264 85.6
BcaC08g47011 Brassica carinata HOM05D004342 ORTHO05D011040 2.7e-125 452.2 264 84.1
C04p46690 Brassica napus HOM05D004342 ORTHO05D011040 1.8e-113 412.9 264 73.5
BcaC03g15908 Brassica carinata HOM05D004342 ORTHO05D011040 2.5e-110 402.5 264 72.3
C04p26830 Brassica napus HOM05D004342 ORTHO05D011040 1.2e-109 400.2 264 71.6
BcaB05g23589 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-107 393.7 273 70.3
BolC4t26257H Brassica oleracea HOM05D004342 ORTHO05D011040 2.6e-107 392.5 275 69.1
BcaB01g01402 Brassica carinata HOM05D004342 ORTHO05D011040 6.3e-106 387.9 266 69.2
BraA02t07939Z Brassica rapa HOM05D004342 ORTHO05D107931 1.1e-105 387.1 275 67.6
BcaB08g35473 Brassica carinata HOM05D004342 ORTHO05D011040 1.4e-105 386.7 266 68.8
BolC4t24121H Brassica oleracea HOM05D004342 ORTHO05D011040 1.4e-105 386.7 275 68.7
BcaB03g16647 Brassica carinata HOM05D004342 ORTHO05D011040 3.1e-105 385.6 266 68.8
BcaB06g27861 Brassica carinata HOM05D004342 ORTHO05D011040 1.2e-104 383.6 194 92.8
C09p56360 Brassica napus HOM05D004342 ORTHO05D011040 1.7e-103 379.8 264 70.1
BcaB05g23725 Brassica carinata HOM05D004342 ORTHO05D011040 1.5e-102 376.7 264 70.1
BcaC04g19377 Brassica carinata HOM05D004342 ORTHO05D011040 9.4e-102 374.0 265 69.8
BcaB07g32852 Brassica carinata HOM05D004342 ORTHO05D011040 8.0e-101 370.9 264 69.7
BcaB05g23199 Brassica carinata HOM05D004342 ORTHO05D011040 2.3e-100 369.4 209 86.1
C02p48390 Brassica napus HOM05D004342 ORTHO05D011040 5.2e-100 368.2 266 68.4
BolC2t10870H Brassica oleracea HOM05D004342 ORTHO05D011040 5.2e-100 368.2 266 68.4
BcaC05g27753 Brassica carinata HOM05D004342 ORTHO05D032754 6.7e-100 367.9 249 70.3
BolC9t58505H Brassica oleracea HOM05D004342 ORTHO05D011040 2.0e-99 366.3 266 68.4
BcaB08g35403 Brassica carinata HOM05D004342 ORTHO05D011040 3.7e-98 362.1 266 65.0
C03p70160 Brassica napus HOM05D004342 ORTHO05D011040 1.6e-96 356.7 237 70.5
BraA04t16111Z Brassica rapa HOM05D004342 ORTHO05D011040 1.3e-95 353.6 266 65.8
BraA01t02418Z Brassica rapa HOM05D004342 ORTHO05D011040 1.7e-95 353.2 267 67.0
BolC6t36906H Brassica oleracea HOM05D004342 ORTHO05D011040 2.7e-93 345.9 273 63.0
A10p05900 Brassica napus HOM05D004342 ORTHO05D013036 1.9e-86 323.2 172 86.0
BcaC03g16189 Brassica carinata HOM05D004342 ORTHO05D011040 3.6e-85 318.9 267 61.4
BolC7t40696H Brassica oleracea HOM05D004342 ORTHO05D042740 8.0e-85 317.8 265 60.8
A06p24190 Brassica napus HOM05D004342 ORTHO05D013036 2.3e-84 316.2 168 86.9
A06p23950 Brassica napus HOM05D004342 ORTHO05D013036 4.0e-84 315.5 171 85.4
A05p21050 Brassica napus HOM05D004342 ORTHO05D013036 5.2e-84 315.1 179 82.1
A05p24900 Brassica napus HOM05D004342 ORTHO05D013036 5.2e-84 315.1 168 86.9
C05p37450 Brassica napus HOM05D004342 ORTHO05D032754 5.2e-84 315.1 258 61.6
BraA04t16568Z Brassica rapa HOM05D004342 ORTHO05D013036 8.8e-84 314.3 169 87.0
C07p02600 Brassica napus HOM05D004342 ORTHO05D040391 1.2e-83 313.9 265 57.7
C07p03020 Brassica napus HOM05D004342 ORTHO05D042740 1.5e-83 313.5 265 60.0
BolC7t40658H Brassica oleracea HOM05D004342 ORTHO05D040391 2.6e-83 312.8 265 57.4
BolC3t19271H Brassica oleracea HOM05D004342 ORTHO05D032754 3.7e-82 308.9 258 58.9
A02p33870 Brassica napus HOM05D004342 ORTHO05D013036 1.4e-81 307.0 168 85.1
BcaB06g27355 Brassica carinata HOM05D004342 ORTHO05D011040 1.6e-80 303.5 264 60.6
A06p14130 Brassica napus HOM05D004342 ORTHO05D013036 1.0e-79 300.8 168 83.3
BolC2t09673H Brassica oleracea HOM05D004342 ORTHO05D042860 1.3e-79 300.4 275 57.1
BolC5t33355H Brassica oleracea HOM05D004342 ORTHO05D016748 1.0e-76 290.8 209 66.5
C06p17080 Brassica napus HOM05D004342 ORTHO05D016748 2.6e-75 286.2 218 65.1
BolC8t47840H Brassica oleracea HOM05D004342 ORTHO05D016748 4.9e-74 282.0 204 67.6
C05p46270 Brassica napus HOM05D004342 ORTHO05D016748 2.4e-73 279.6 209 65.6
A02p29080 Brassica napus HOM05D004342 ORTHO05D042860 2.0e-72 276.6 264 54.2
BolC5t32015H Brassica oleracea HOM05D004342 ORTHO05D041540 2.3e-71 273.1 265 52.8
C05p32840 Brassica napus HOM05D004342 ORTHO05D041540 3.0e-71 272.7 265 52.8
BraA10t42852Z Brassica rapa HOM05D004342 ORTHO05D013036 1.9e-70 270.0 154 82.5
BolC3t21133H Brassica oleracea HOM05D004342 ORTHO05D016748 1.5e-67 260.4 215 60.5
BraA10t43034Z Brassica rapa HOM05D004342 ORTHO05D013036 2.0e-67 260.0 154 80.5
BraA06t25485Z Brassica rapa HOM05D004342 ORTHO05D013036 5.8e-67 258.5 157 78.3
BraA01t02499Z Brassica rapa HOM05D004342 ORTHO05D013036 4.1e-65 252.3 157 77.1
BraA02t08405Z Brassica rapa HOM05D004342 ORTHO05D013036 1.2e-64 250.8 157 77.1
BraA06t24546Z Brassica rapa HOM05D004342 ORTHO05D013036 3.5e-64 249.2 157 75.8
A01p25070 Brassica napus HOM05D004342 ORTHO05D011040 1.3e-63 247.3 266 53.4
C03p68080 Brassica napus HOM05D004342 ORTHO05D042288 2.8e-61 239.6 261 49.4
BolC3t19031H Brassica oleracea HOM05D004342 ORTHO05D042288 2.8e-61 239.6 261 49.4
C03p64680 Brassica napus HOM05D004342 ORTHO05D040895 6.4e-58 228.4 209 55.5
BcaB02g11238 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-57 227.6 144 72.9
C04p30590 Brassica napus HOM05D004342 ORTHO05D097110 1.2e-56 224.2 221 54.8
BolC8t49973H Brassica oleracea HOM05D004342 ORTHO05D042841 3.5e-56 222.6 211 56.4
BolC5t32487H Brassica oleracea HOM05D004342 ORTHO05D016748 1.0e-55 221.1 161 67.1
C08p23450 Brassica napus HOM05D004342 ORTHO05D042841 8.6e-55 218.0 258 48.1
BolC2t09619H Brassica oleracea HOM05D004342 ORTHO05D033291 1.2e-53 214.2 265 46.0
A07p06290 Brassica napus HOM05D004342 ORTHO05D099060 2.8e-53 213.0 118 83.9
BcaB04g17938 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-52 211.1 102 96.1
A03p64730 Brassica napus HOM05D004342 ORTHO05D013036 5.2e-52 208.8 118 84.7
BcaB08g34712 Brassica carinata HOM05D004342 ORTHO05D011040 6.8e-52 208.4 264 47.0
C02p36040 Brassica napus HOM05D004342 ORTHO05D033291 1.2e-51 207.6 265 44.2
BcaC01g01958 Brassica carinata HOM05D004342 ORTHO05D090434 1.5e-51 207.2 139 68.3
BraA09t39012Z Brassica rapa HOM05D004342 ORTHO05D041860 2.0e-51 206.8 207 54.6
BolC3t18726H Brassica oleracea HOM05D004342 ORTHO05D040895 4.4e-51 205.7 209 51.2
BraSC35t45984Z Brassica rapa HOM05D004342 ORTHO05D014936 1.3e-50 204.1 151 66.9
BcaB07g33403 Brassica carinata HOM05D004342 ORTHO05D093493 2.9e-50 203.0 145 67.6
A10p08140 Brassica napus HOM05D004342 ORTHO05D014936 2.9e-50 203.0 151 67.5
A09p34820 Brassica napus HOM05D004342 ORTHO05D041860 1.4e-49 200.7 207 53.1
BolC2t09984H Brassica oleracea HOM05D004342 ORTHO05D107287 1.4e-49 200.7 291 41.9
BcaC08g44285 Brassica carinata HOM05D004342 ORTHO05D016748 1.9e-49 200.3 153 64.7
C02p36010 Brassica napus HOM05D004342 ORTHO05D033291 7.1e-49 198.4 253 44.3
C02p39690 Brassica napus HOM05D004342 ORTHO05D014936 2.1e-48 196.8 123 75.6
BolC7t41910H Brassica oleracea HOM05D004342 ORTHO05D014936 6.0e-48 195.3 123 74.8
C07p14140 Brassica napus HOM05D004342 ORTHO05D014936 8.6e-47 191.4 123 74.0
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 4.3e-46 189.1 211 51.2
C08p05970 Brassica napus HOM05D004342 ORTHO05D098872 9.6e-46 188.0 184 52.7
BcaB02g07288 Brassica carinata HOM05D004342 ORTHO05D016748 6.2e-45 185.3 160 60.0
A04p03900 Brassica napus HOM05D004342 ORTHO05D018601 1.4e-44 184.1 130 70.8
BcaC01g01112 Brassica carinata HOM05D004342 ORTHO05D016748 5.2e-44 182.2 160 58.8
BcaB01g02523 Brassica carinata HOM05D004342 ORTHO05D016748 1.7e-42 177.2 160 58.1
A06p35820 Brassica napus HOM05D004342 ORTHO05D013036 4.9e-42 175.6 93 87.1
BolC2t08690H Brassica oleracea HOM05D004342 ORTHO05D040487 7.1e-41 171.8 264 39.4
C02p26240 Brassica napus HOM05D004342 ORTHO05D040487 1.6e-40 170.6 264 38.6
C07p09210 Brassica napus HOM05D004342 ORTHO05D014936 2.1e-40 170.2 123 65.0
BolC7t41332H Brassica oleracea HOM05D004342 ORTHO05D014936 2.1e-40 170.2 123 65.0
BolC8t47411H Brassica oleracea HOM05D004342 ORTHO05D106550 3.5e-40 169.5 253 40.3
BcaB04g18376 Brassica carinata HOM05D004342 ORTHO05D018601 1.1e-38 164.5 139 59.7
C03p88250 Brassica napus HOM05D004342 ORTHO05D018601 2.1e-37 160.2 136 61.8
A03p66330 Brassica napus HOM05D000062 ORTHO05D000043 2.8e-37 159.8 137 62.0
C03p67290 Brassica napus HOM05D004342 ORTHO05D033138 4.8e-37 159.1 206 43.2
BolSC21t60296H Brassica oleracea HOM05D004342 ORTHO05D033138 4.8e-37 159.1 206 43.2
C05p42390 Brassica napus HOM05D004342 ORTHO05D041824 6.2e-37 158.7 142 58.5
BolC5t32968H Brassica oleracea HOM05D004342 ORTHO05D041824 6.2e-37 158.7 142 58.5
BcaB01g01175 Brassica carinata HOM05D004342 ORTHO05D018601 8.1e-37 158.3 151 54.3
BraA06t25909Z Brassica rapa HOM05D004342 ORTHO05D013036 1.4e-36 157.5 102 73.5
BraA05t21009Z Brassica rapa HOM05D004342 ORTHO05D013036 9.0e-36 154.8 97 74.2
A07p06040 Brassica napus HOM05D004342 ORTHO05D101341 2.6e-35 153.3 167 47.9
C02p40210 Brassica napus HOM05D004342 ORTHO05D018674 2.4e-33 146.7 106 66.0
C02p40200 Brassica napus HOM05D004342 ORTHO05D014936 9.3e-33 144.8 123 56.9
BcaB08g35573 Brassica carinata HOM05D004342 ORTHO05D018674 1.6e-32 144.1 73 93.2
C01p35180 Brassica napus HOM05D004342 ORTHO05D028050 2.1e-32 143.7 169 47.3
BolC1t03477H Brassica oleracea HOM05D004342 ORTHO05D028050 2.1e-32 143.7 169 47.3
BraA07t27945Z Brassica rapa HOM05D004342 ORTHO05D014936 2.1e-32 143.7 105 63.8
A01p27340 Brassica napus HOM05D004342 ORTHO05D028050 4.6e-32 142.5 169 46.7
BraA01t02874Z Brassica rapa HOM05D004342 ORTHO05D028050 4.6e-32 142.5 169 46.7
A01p28260 Brassica napus HOM05D004342 ORTHO05D014936 6.0e-32 142.1 106 66.0
BraSC35t45983Z Brassica rapa HOM05D004342 ORTHO05D018674 5.3e-28 129.0 86 65.1
A06p19230 Brassica napus HOM05D004342 ORTHO05D018601 3.8e-26 122.9 95 64.2
BolC6t36414H Brassica oleracea HOM05D004342 ORTHO05D042454 1.4e-25 120.9 264 33.0
BraA03t15693Z Brassica rapa HOM05D004342 ORTHO05D027051 3.2e-25 119.8 101 56.4
BraA06t26508Z Brassica rapa HOM05D004342 ORTHO05D013036 7.1e-25 118.6 86 68.6
C02p39700 Brassica napus HOM05D004342 ORTHO05D099964 1.2e-24 117.9 122 54.1
BcaC07g39329 Brassica carinata HOM05D004342 ORTHO05D018601 2.1e-24 117.1 94 61.7
BcaB07g33226 Brassica carinata HOM05D004342 ORTHO05D014936 1.0e-23 114.8 105 58.1
BcaC06g36550 Brassica carinata HOM05D004342 ORTHO05D018601 3.9e-23 112.8 92 59.8
BolC7t41081H Brassica oleracea HOM05D004342 ORTHO05D042200 8.7e-23 111.7 145 43.4
BolC2t10046H Brassica oleracea HOM05D004342 ORTHO05D018674 1.9e-22 110.5 73 69.9
C07p06590 Brassica napus HOM05D004342 ORTHO05D042200 3.3e-22 109.8 145 43.4
C01p33380 Brassica napus HOM05D004342 ORTHO05D101940 4.3e-22 109.4 90 62.2
A03p66340 Brassica napus HOM05D004342 ORTHO05D018674 3.7e-21 106.3 71 67.6
BraA03t15692Z Brassica rapa HOM05D004342 ORTHO05D018674 3.7e-21 106.3 71 67.6
A10p08150 Brassica napus HOM05D004342 ORTHO05D018674 6.2e-21 105.5 67 67.2
BolC6t39191H Brassica oleracea HOM05D004342 ORTHO05D041978 2.0e-19 100.5 101 49.5
C06p12600 Brassica napus HOM05D004342 ORTHO05D042454 3.8e-18 96.3 264 29.5
C07p09200 Brassica napus HOM05D004342 ORTHO05D096449 3.8e-18 96.3 82 61.0
BcaB02g10428 Brassica carinata HOM05D004342 ORTHO05D018674 8.4e-18 95.1 53 75.5
BraA07t28391Z Brassica rapa HOM05D004342 ORTHO05D014936 2.5e-17 93.6 89 52.8
BraA03t15562Z Brassica rapa HOM05D004342 ORTHO05D014936 7.1e-17 92.0 67 67.2
BcaC03g16937 Brassica carinata HOM05D004342 ORTHO05D027051 2.1e-16 90.5 73 63.0
BcaB06g27423 Brassica carinata HOM05D004342 ORTHO05D027051 7.9e-16 88.6 89 55.1
BraA07t27946Z Brassica rapa HOM05D004342 ORTHO05D108557 4.3e-14 82.8 50 72.0
BraA06t25007Z Brassica rapa HOM05D004342 ORTHO05D018601 9.6e-14 81.6 95 45.3
C06p42390 Brassica napus HOM05D004342 ORTHO05D041978 2.8e-13 80.1 72 52.8
BcaC06g35994 Brassica carinata HOM05D004342 ORTHO05D027051 3.1e-12 76.6 73 54.8
BraA06t25627Z Brassica rapa HOM05D004342 ORTHO05D107595 5.3e-12 75.9 73 53.4
AT1G52950 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 8.5e-10 68.6 265 24.5
BraA06t25628Z Brassica rapa HOM05D004342 ORTHO05D033138 4.6e-08 62.8 116 32.8
BcaB07g33404 Brassica carinata HOM05D004342 ORTHO05D095904 3.0e-07 60.1 39 61.5
BolC3t21022H Brassica oleracea HOM05D004342 ORTHO05D041047 1.9e-06 57.4 64 48.4


User provided reference genes

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