Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35261 Brassica carinata HOM05D000353 ORTHO05D000174 6.4e-76 287.3 147 100.0
C01p17330 Brassica napus HOM05D000353 ORTHO05D000174 2.0e-29 132.9 85 81.2
BcaC07g37519 Brassica carinata HOM05D000353 ORTHO05D000174 4.5e-29 131.7 73 91.8
BraA02t07844Z Brassica rapa HOM05D000353 ORTHO05D000174 5.7e-24 114.8 73 82.2
BolC2t10481H Brassica oleracea HOM05D000353 ORTHO05D000174 2.8e-23 112.5 73 82.2
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 4.2e-19 98.6 74 62.2
BcaB08g34620 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-18 97.1 69 68.1
BcaB06g28316 Brassica carinata HOM05D000353 ORTHO05D000174 1.6e-18 96.7 84 57.1
C02p49240 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-18 96.3 84 59.5
BcaC09g51435 Brassica carinata HOM05D000353 ORTHO05D000174 2.8e-18 95.9 73 63.0
A03p30400 Brassica napus HOM05D000353 ORTHO05D000174 2.8e-18 95.9 73 63.0
A03p30410 Brassica napus HOM05D000353 ORTHO05D000174 2.8e-18 95.9 73 63.0
A04p34430 Brassica napus HOM05D000353 ORTHO05D000174 2.8e-18 95.9 73 63.0
A07p20350 Brassica napus HOM05D000353 ORTHO05D000174 2.8e-18 95.9 73 63.0
BolC1t01288H Brassica oleracea HOM05D000353 ORTHO05D000174 2.8e-18 95.9 73 63.0
BcaC01g00750 Brassica carinata HOM05D000353 ORTHO05D000174 3.6e-18 95.5 85 58.8
C04p26530 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-17 93.6 71 62.0
BraA03t14652Z Brassica rapa HOM05D000353 ORTHO05D000174 1.4e-17 93.6 67 65.7
BraA09t38461Z Brassica rapa HOM05D000353 ORTHO05D000174 2.3e-17 92.8 71 62.0
BcaC06g36423 Brassica carinata HOM05D000353 ORTHO05D000174 4.0e-17 92.0 73 65.8
BcaC08g44543 Brassica carinata HOM05D000353 ORTHO05D000174 4.0e-17 92.0 71 67.6
A02p32050 Brassica napus HOM05D000353 ORTHO05D000174 4.0e-17 92.0 72 62.5
A03p66100 Brassica napus HOM05D000353 ORTHO05D000174 4.0e-17 92.0 84 57.1
A05p24550 Brassica napus HOM05D000353 ORTHO05D000174 4.0e-17 92.0 84 57.1
BraA02t08216Z Brassica rapa HOM05D000353 ORTHO05D000174 4.0e-17 92.0 72 62.5
BraA09t40707Z Brassica rapa HOM05D000353 ORTHO05D000174 4.0e-17 92.0 84 57.1
A07p36560 Brassica napus HOM05D000353 ORTHO05D000174 5.2e-17 91.7 73 65.8
BcaB08g34954 Brassica carinata HOM05D000353 ORTHO05D000174 6.8e-17 91.3 69 65.2
BcaB05g22552 Brassica carinata HOM05D000353 ORTHO05D000174 8.9e-17 90.9 72 58.3
BcaC02g10672 Brassica carinata HOM05D000353 ORTHO05D000174 1.5e-16 90.1 69 60.9
C03p18660 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-16 90.1 72 62.5
C09p27100 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-16 90.1 72 62.5
BolC8t47058H Brassica oleracea HOM05D000353 ORTHO05D000174 1.5e-16 90.1 72 62.5
BcaC02g08804 Brassica carinata HOM05D000353 ORTHO05D000174 2.6e-16 89.4 85 52.9
C06p15640 Brassica napus HOM05D000353 ORTHO05D000174 2.6e-16 89.4 73 63.0
BolC2t10352H Brassica oleracea HOM05D000353 ORTHO05D000174 3.4e-16 89.0 70 64.3
BcaB01g03388 Brassica carinata HOM05D000353 ORTHO05D000174 1.3e-15 87.0 81 60.5
BcaB02g11010 Brassica carinata HOM05D000353 ORTHO05D000174 1.3e-15 87.0 73 57.5
BolC2t10476H Brassica oleracea HOM05D000353 ORTHO05D000174 4.9e-15 85.1 54 83.3
BcaC01g00912 Brassica carinata HOM05D000353 ORTHO05D000174 8.3e-15 84.3 74 62.2
C02p26060 Brassica napus HOM05D000353 ORTHO05D000174 8.3e-15 84.3 73 56.2
BolC4t26647H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-14 84.0 81 51.9
C02p44380 Brassica napus HOM05D000353 ORTHO05D000174 1.8e-14 83.2 48 79.2
BcaB06g27108 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-14 82.8 73 58.9
A10p04480 Brassica napus HOM05D000353 ORTHO05D102275 4.1e-14 82.0 94 46.8
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 9.2e-14 80.9 73 53.4
C05p49950 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-13 80.5 71 59.2
C03p86060 Brassica napus HOM05D000353 ORTHO05D000174 4.5e-13 78.6 113 47.8
BolC4t25352H Brassica oleracea HOM05D000353 ORTHO05D000174 2.3e-12 76.3 84 48.8
BolC5t33651H Brassica oleracea HOM05D000353 ORTHO05D000174 1.9e-11 73.2 73 47.9
Thhalv10009292m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.5e-11 72.8 69 55.1
BcaC03g16609 Brassica carinata HOM05D000353 ORTHO05D000174 3.3e-11 72.4 48 75.0
A02p28070 Brassica napus HOM05D000353 ORTHO05D028004 5.6e-11 71.6 72 55.6
C07p07970 Brassica napus HOM05D000353 ORTHO05D000174 5.6e-11 71.6 74 47.3
BolC7t41214H Brassica oleracea HOM05D000353 ORTHO05D000174 5.6e-11 71.6 74 47.3
C05p49080 Brassica napus HOM05D000353 ORTHO05D000174 7.3e-11 71.2 73 46.6
BraA05t22072Z Brassica rapa HOM05D000353 ORTHO05D000174 7.3e-11 71.2 73 47.9
A03p66210 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-10 70.5 73 46.6
BraA03t15674Z Brassica rapa HOM05D000353 ORTHO05D000174 1.2e-10 70.5 73 46.6
BcaC02g09046 Brassica carinata HOM05D000353 ORTHO05D000174 2.1e-10 69.7 92 43.5
BolC3t14258H Brassica oleracea HOM05D000353 ORTHO05D000174 4.7e-10 68.6 54 63.0
BcaC06g33059 Brassica carinata HOM05D000353 ORTHO05D000174 8.0e-10 67.8 73 46.6
A04p34420 Brassica napus HOM05D000353 ORTHO05D000174 8.0e-10 67.8 45 68.9
Carub.0007s3602 Capsella rubella HOM05D000353 ORTHO05D000174 1.0e-09 67.4 82 42.7
C01p36340 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-09 67.0 74 45.9
BolC1t03592H Brassica oleracea HOM05D000353 ORTHO05D000174 1.4e-09 67.0 74 45.9
A07p20360 Brassica napus HOM05D000353 ORTHO05D000174 3.1e-09 65.9 44 68.2
C01p13150 Brassica napus HOM05D000353 ORTHO05D000174 3.1e-09 65.9 44 68.2
BcaC08g45255 Brassica carinata HOM05D000353 ORTHO05D000174 8.9e-09 64.3 70 44.3
C07p17710 Brassica napus HOM05D000353 ORTHO05D000174 8.9e-09 64.3 59 55.9
BolC5t34161H Brassica oleracea HOM05D000353 ORTHO05D000174 2.0e-08 63.2 59 57.6
BraA03t14653Z Brassica rapa HOM05D000353 ORTHO05D000174 2.6e-08 62.8 73 43.8
BcaC06g36089 Brassica carinata HOM05D000353 ORTHO05D000174 5.8e-08 61.6 58 50.0
A09p28970 Brassica napus HOM05D000353 ORTHO05D000174 7.5e-08 61.2 52 59.6
BolC9t57402H Brassica oleracea HOM05D000353 ORTHO05D000174 7.5e-08 61.2 81 40.7
A09p12780 Brassica napus HOM05D000353 ORTHO05D000174 9.8e-08 60.8 44 68.2
C09p45320 Brassica napus HOM05D000353 ORTHO05D000174 2.2e-07 59.7 45 57.8
Thhalv10028256m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 8.3e-07 57.8 66 39.4
BolC7t44984H Brassica oleracea HOM05D000353 ORTHO05D000174 3.2e-06 55.8 50 56.0
BcaC02g07613 Brassica carinata HOM05D000353 ORTHO05D000174 4.1e-06 55.5 47 55.3
Thhalv10027364m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 9.2e-06 54.3 66 37.9


User provided reference genes

Program Settings