Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35204 Brassica carinata HOM05D000279 ORTHO05D013796 2.5e-64 249.6 245 100.0
BcaNung03236 Brassica carinata HOM05D000279 ORTHO05D013796 4.0e-30 136.0 87 79.3
BcaNung03238 Brassica carinata HOM05D000279 ORTHO05D013796 4.0e-30 136.0 87 79.3
BolC4t22000H Brassica oleracea HOM05D000279 ORTHO05D013796 2.9e-28 129.8 86 79.1
A05p03020 Brassica napus HOM05D000279 ORTHO05D013796 8.3e-28 128.3 89 76.4
BraA05t19291Z Brassica rapa HOM05D000279 ORTHO05D013796 7.1e-27 125.2 79 78.5
BcaC02g12432 Brassica carinata HOM05D000279 ORTHO05D013796 1.2e-26 124.4 80 76.2
BcaC04g19855 Brassica carinata HOM05D000279 ORTHO05D013796 2.1e-26 123.6 102 70.6
BolC9t57961H Brassica oleracea HOM05D000279 ORTHO05D013796 2.1e-26 123.6 102 70.6
BraA10t43691Z Brassica rapa HOM05D000279 ORTHO05D013796 2.1e-26 123.6 88 78.4
C04p03630 Brassica napus HOM05D000279 ORTHO05D013796 3.5e-26 122.9 79 75.9
Sp4g24610 Schrenkiella parvula HOM05D000279 ORTHO05D000498 2.4e-22 110.2 85 69.4
BcaNung03235 Brassica carinata HOM05D000279 ORTHO05D013796 4.1e-19 99.4 71 71.8
Thhalv10017566m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 2.5e-16 90.1 68 70.6
C03p28200 Brassica napus HOM05D000279 ORTHO05D000498 4.6e-10 69.3 74 50.0
BolC3t15191H Brassica oleracea HOM05D000279 ORTHO05D000498 4.6e-10 69.3 74 50.0
A05p02990 Brassica napus HOM05D000279 ORTHO05D000498 6.0e-10 68.9 69 56.5
A03p23650 Brassica napus HOM05D000279 ORTHO05D000498 1.3e-09 67.8 74 50.0
BraA03t11581Z Brassica rapa HOM05D000279 ORTHO05D000498 1.3e-09 67.8 74 50.0
A04p32240 Brassica napus HOM05D000279 ORTHO05D000498 2.3e-09 67.0 74 55.4
AL4G40940 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 3.0e-09 66.6 71 53.5
CARHR260850 Cardamine hirsuta HOM05D000279 ORTHO05D017442 3.9e-09 66.2 62 58.1
AL2G15770 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 5.1e-09 65.9 82 43.9
AL4G40950 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 5.1e-09 65.9 78 50.0
CARHR137510 Cardamine hirsuta HOM05D000279 ORTHO05D000498 1.1e-08 64.7 74 48.6
AT2G42465 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 1.5e-08 64.3 78 48.7
Thhalv10008254m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 1.9e-08 63.9 74 48.6
AL4G41010 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 3.3e-08 63.2 63 58.7
Carub.0004s2486 Capsella rubella HOM05D000279 ORTHO05D000498 3.3e-08 63.2 74 48.6
A05p03000 Brassica napus HOM05D000279 ORTHO05D000498 5.6e-08 62.4 56 60.7
BcaB06g29249 Brassica carinata HOM05D000279 ORTHO05D000498 9.6e-08 61.6 64 57.8
C04p03610 Brassica napus HOM05D000279 ORTHO05D000498 9.6e-08 61.6 56 60.7
BolC4t21996H Brassica oleracea HOM05D000279 ORTHO05D000498 9.6e-08 61.6 56 60.7
BolC4t21997H Brassica oleracea HOM05D000279 ORTHO05D000498 9.6e-08 61.6 56 58.9
AL4G40930 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 2.1e-07 60.5 97 41.2
AL4G40910 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 2.8e-07 60.1 92 43.5
A05p03010 Brassica napus HOM05D000279 ORTHO05D000498 2.8e-07 60.1 63 54.0
AT2G42455 Arabidopsis thaliana HOM05D000279 ORTHO05D017442 3.6e-07 59.7 63 54.0
Sp2g04180 Schrenkiella parvula HOM05D000279 ORTHO05D017442 6.2e-07 58.9 63 46.0
CARHR127280 Cardamine hirsuta HOM05D000279 ORTHO05D000498 1.1e-06 58.2 78 43.6
AL1G20340 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 4.0e-06 56.2 74 45.9
Carub.0004s2488 Capsella rubella HOM05D000279 ORTHO05D000498 4.0e-06 56.2 57 56.1
BcaC09g49415 Brassica carinata HOM05D000279 ORTHO05D000498 9.0e-06 55.1 63 47.6
BolC1t03654H Brassica oleracea HOM05D000279 ORTHO05D000498 9.0e-06 55.1 63 47.6


User provided reference genes

Program Settings