Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35170 Brassica carinata HOM05D008216 ORTHO05D027409 1.6e-89 332.8 177 100.0
BcaB02g10995 Brassica carinata HOM05D008216 ORTHO05D011188 9.6e-18 94.4 131 47.3
BraA05t20799Z Brassica rapa HOM05D008216 ORTHO05D011188 3.1e-16 89.4 119 48.7
A05p19020 Brassica napus HOM05D008216 ORTHO05D011188 1.5e-15 87.0 119 47.9
BcaC08g43993 Brassica carinata HOM05D008216 ORTHO05D011188 1.7e-14 83.6 119 46.2
C06p13990 Brassica napus HOM05D008216 ORTHO05D011188 1.7e-14 83.6 119 46.2
BolC6t36576H Brassica oleracea HOM05D008216 ORTHO05D011188 1.7e-14 83.6 119 46.2
C03p68520 Brassica napus HOM05D008216 ORTHO05D027409 8.4e-14 81.3 56 80.4
Thhalv10011252m.g Eutrema salsugineum HOM05D008216 ORTHO05D011188 7.2e-13 78.2 120 47.5
CARHR042550 Cardamine hirsuta HOM05D008216 ORTHO05D011188 1.8e-11 73.6 67 67.2
C02p30120 Brassica napus HOM05D008216 ORTHO05D027409 3.1e-08 62.8 41 87.8
BolC3t19111H Brassica oleracea HOM05D008216 ORTHO05D027409 5.3e-08 62.0 49 75.5
Sp1g39030 Schrenkiella parvula HOM05D008216 ORTHO05D011188 2.0e-07 60.1 67 55.2
AT1G52410 Arabidopsis thaliana HOM05D008216 ORTHO05D011188 3.4e-07 59.3 116 37.9
AL1G60670 Arabidopsis lyrata HOM05D008216 ORTHO05D011188 5.9e-07 58.5 117 35.9
Carub.0003s1569 Capsella rubella HOM05D008216 ORTHO05D012788 1.3e-06 57.4 62 56.5
Aa31LG10G2520 Aethionema arabicum HOM05D008216 ORTHO05D058766 1.7e-06 57.0 61 55.7
BcaC08g43426 Brassica carinata HOM05D008216 ORTHO05D011188 1.7e-06 57.0 67 53.7
C06p07930 Brassica napus HOM05D008216 ORTHO05D011188 1.7e-06 57.0 67 53.7
BolC6t35876H Brassica oleracea HOM05D008216 ORTHO05D011188 1.7e-06 57.0 67 53.7
Carub.0001s4140 Capsella rubella HOM05D008216 ORTHO05D011188 1.7e-06 57.0 67 53.7
A06p01810 Brassica napus HOM05D008216 ORTHO05D011188 2.9e-06 56.2 67 53.7
BraA05t22171Z Brassica rapa HOM05D008216 ORTHO05D012788 2.9e-06 56.2 59 57.6
BraA06t23398Z Brassica rapa HOM05D008216 ORTHO05D011188 2.9e-06 56.2 67 53.7
AT3G15950 Arabidopsis thaliana HOM05D008216 ORTHO05D012788 6.5e-06 55.1 118 34.7
BcaC05g28920 Brassica carinata HOM05D008216 ORTHO05D012788 8.5e-06 54.7 59 57.6
A05p33490 Brassica napus HOM05D008216 ORTHO05D012788 8.5e-06 54.7 59 55.9
C05p50470 Brassica napus HOM05D008216 ORTHO05D012788 8.5e-06 54.7 59 57.6
Thhalv10020122m.g Eutrema salsugineum HOM05D008216 ORTHO05D012788 8.5e-06 54.7 118 39.0


User provided reference genes

Program Settings