Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35145 Brassica carinata HOM05D000756 ORTHO05D000604 4.5e-43 177.6 91 100.0
C08p38890 Brassica napus HOM05D000756 ORTHO05D000604 1.9e-33 145.6 84 90.5
Sp4g04090 Schrenkiella parvula HOM05D000756 ORTHO05D000604 7.1e-33 143.7 83 88.0
BolC8t51461H Brassica oleracea HOM05D000756 ORTHO05D000604 1.6e-32 142.5 84 88.1
BcaC07g40891 Brassica carinata HOM05D000756 ORTHO05D000604 1.0e-31 139.8 84 88.1
A09p55920 Brassica napus HOM05D000756 ORTHO05D000604 8.7e-31 136.7 81 88.9
BraA09t40993Z Brassica rapa HOM05D000756 ORTHO05D000604 8.7e-31 136.7 81 88.9
Thhalv10000311m.g Eutrema salsugineum HOM05D000756 ORTHO05D000604 1.4e-28 129.4 83 79.5
Aa31LG7G12210 Aethionema arabicum HOM05D000756 ORTHO05D000604 2.6e-27 125.2 84 78.6
AL4G16210 Arabidopsis lyrata HOM05D000756 ORTHO05D000604 3.2e-25 118.2 81 77.8
Carub.0004s0466 Capsella rubella HOM05D000756 ORTHO05D000604 1.2e-24 116.3 81 72.8
AT2G25080 Arabidopsis thaliana HOM05D000756 ORTHO05D000604 7.9e-24 113.6 81 76.5
CARHR116630 Cardamine hirsuta HOM05D000756 ORTHO05D000604 1.0e-23 113.2 81 74.1
Thhalv10026852m.g Eutrema salsugineum HOM05D000756 ORTHO05D000604 1.9e-17 92.4 83 61.4
Sp7g29680 Schrenkiella parvula HOM05D000756 ORTHO05D000604 1.3e-13 79.7 84 56.0
THA.LOC104803619 Tarenaya hassleriana HOM05D000756 ORTHO05D000604 1.7e-13 79.3 83 54.2
Carub.0007s0868 Capsella rubella HOM05D000756 ORTHO05D000604 4.8e-13 77.8 81 54.3
AL7G20100 Arabidopsis lyrata HOM05D000756 ORTHO05D000604 8.2e-13 77.0 83 55.4
C07p58940 Brassica napus HOM05D000756 ORTHO05D000604 3.4e-11 71.6 84 53.6
BolC7t46341H Brassica oleracea HOM05D000756 ORTHO05D000604 3.4e-11 71.6 84 53.6
AT4G31870 Arabidopsis thaliana HOM05D000756 ORTHO05D000604 7.7e-11 70.5 78 52.6
A03p61050 Brassica napus HOM05D000756 ORTHO05D000604 1.7e-10 69.3 84 52.4
BraA03t15145Z Brassica rapa HOM05D000756 ORTHO05D000604 1.7e-10 69.3 84 52.4
Manes.16G130700 Manihot esculenta HOM05D000756 ORTHO05D000604 2.3e-07 58.9 57 54.4
Potri.006G265400 Populus trichocarpa HOM05D000756 ORTHO05D000604 3.9e-07 58.2 66 50.0
COL.COLO4_18961 Corchorus olitorius HOM05D000756 ORTHO05D000604 6.7e-07 57.4 86 44.2
Cfa013032 Carpinus fangiana HOM05D000756 ORTHO05D000604 1.5e-06 56.2 85 42.4
Sabra06G0208000 Salix brachista HOM05D000756 ORTHO05D000604 5.7e-06 54.3 83 43.4
Atru.chr7.2554 Acer truncatum HOM05D000756 ORTHO05D000604 9.7e-06 53.5 92 44.6


User provided reference genes

Program Settings