Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35049 Brassica carinata HOM05D014762 ORTHO05D006770 7.1e-133 477.2 237 100.0
BcaB03g16175 Brassica carinata HOM05D014762 ORTHO05D006770 2.8e-73 279.3 152 90.8
BcaB01g01277 Brassica carinata HOM05D014762 ORTHO05D006770 4.3e-29 132.5 89 70.8
C07p13210 Brassica napus HOM05D014762 ORTHO05D023916 5.1e-22 109.0 57 86.0
BolC7t41813H Brassica oleracea HOM05D014762 ORTHO05D023916 5.1e-22 109.0 57 86.0
C04p62270 Brassica napus HOM05D014762 ORTHO05D023916 9.6e-21 104.8 57 82.5
BcaC02g07895 Brassica carinata HOM05D014762 ORTHO05D023916 1.1e-19 101.3 59 78.0
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 1.1e-16 91.3 48 89.6
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 1.1e-16 91.3 52 84.6
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 1.1e-16 91.3 52 84.6
C01p42370 Brassica napus HOM05D005864 ORTHO05D006770 1.4e-16 90.9 52 84.6
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 4.2e-16 89.4 52 82.7
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 1.2e-15 87.8 52 80.8
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 8.1e-12 75.1 52 69.2
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 1.1e-11 74.7 52 71.2
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 1.8e-11 73.9 52 69.2
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 1.8e-11 73.9 52 67.3
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 6.9e-11 72.0 52 67.3
Carub.0003s2189 Capsella rubella HOM05D005864 ORTHO05D006770 5.8e-10 68.9 48 66.7
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 7.6e-10 68.6 52 69.2
BcaC01g02118 Brassica carinata HOM05D014762 ORTHO05D023916 1.4e-08 64.3 50 62.0
C02p45340 Brassica napus HOM05D003162 ORTHO05D024140 1.9e-08 63.9 51 66.7
BcaC06g35859 Brassica carinata HOM05D027199 ORTHO05D024140 7.1e-08 62.0 35 85.7
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 1.3e-06 57.8 132 34.1
BolC2t10566H Brassica oleracea HOM05D003162 ORTHO05D024140 8.7e-06 55.1 52 61.5


User provided reference genes

Program Settings