Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35015 Brassica carinata HOM05D002776 ORTHO05D011320 1.5e-225 785.8 394 100.0
C02p53520 Brassica napus HOM05D002776 ORTHO05D003044 1.2e-129 467.2 528 54.5
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 2.5e-127 459.5 440 61.4
A03p65940 Brassica napus HOM05D002776 ORTHO05D003044 5.3e-125 451.8 419 62.1
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 4.5e-124 448.7 528 53.6
C01p30580 Brassica napus HOM05D002776 ORTHO05D003044 2.5e-122 443.0 529 52.6
C03p66380 Brassica napus HOM05D002776 ORTHO05D003044 2.0e-116 423.3 518 51.0
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 2.5e-114 416.4 407 61.7
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 1.6e-113 413.7 532 50.6
C03p65980 Brassica napus HOM05D002776 ORTHO05D003044 5.1e-112 408.7 419 58.2
A05p28380 Brassica napus HOM05D002776 ORTHO05D003044 2.6e-111 406.4 493 52.9
BcaC04g22429 Brassica carinata HOM05D002776 ORTHO05D011320 4.8e-110 402.1 439 56.7
A10p06580 Brassica napus HOM05D002776 ORTHO05D000395 3.1e-109 399.4 477 53.0
C04p36700 Brassica napus HOM05D002776 ORTHO05D011320 2.2e-107 393.3 542 48.3
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 5.0e-107 392.1 439 56.0
BraA09t40150Z Brassica rapa HOM05D002776 ORTHO05D011320 2.1e-105 386.7 531 47.8
BcaB06g27856 Brassica carinata HOM05D002776 ORTHO05D003044 4.7e-105 385.6 417 56.6
BcaC08g44371 Brassica carinata HOM05D002776 ORTHO05D003044 1.0e-104 384.4 439 54.9
BcaB05g23247 Brassica carinata HOM05D002776 ORTHO05D011320 9.7e-103 377.9 336 64.6
C04p56090 Brassica napus HOM05D002776 ORTHO05D003044 2.8e-102 376.3 411 55.7
A01p26310 Brassica napus HOM05D002776 ORTHO05D011320 1.4e-101 374.0 392 57.1
BolC6t36736H Brassica oleracea HOM05D002776 ORTHO05D011320 8.2e-94 348.2 509 46.6
BcaB05g23078 Brassica carinata HOM05D002776 ORTHO05D011320 7.0e-93 345.1 315 63.2
C07p38490 Brassica napus HOM05D002776 ORTHO05D011320 3.8e-91 339.3 383 55.4
BcaB05g22944 Brassica carinata HOM05D002776 ORTHO05D000395 1.0e-88 331.3 328 60.4
C05p34920 Brassica napus HOM05D002776 ORTHO05D011320 8.8e-88 328.2 372 55.1
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 3.4e-87 326.2 475 48.2
BcaB04g18312 Brassica carinata HOM05D002776 ORTHO05D003044 7.7e-84 315.1 172 91.9
BolC3t18911H Brassica oleracea HOM05D002776 ORTHO05D003044 1.0e-80 304.7 477 45.9
C09p19460 Brassica napus HOM05D002776 ORTHO05D003044 1.4e-80 304.3 473 45.5
A08p08130 Brassica napus HOM05D002776 ORTHO05D003044 3.0e-80 303.1 179 87.2
BcaC02g09778 Brassica carinata HOM05D002776 ORTHO05D011320 1.3e-78 297.7 314 58.0
A09p33400 Brassica napus HOM05D002776 ORTHO05D003044 8.3e-78 295.0 179 84.4
BcaB04g17677 Brassica carinata HOM05D002776 ORTHO05D003044 2.4e-77 293.5 178 84.3
BcaC06g36448 Brassica carinata HOM05D002776 ORTHO05D003044 3.5e-76 289.7 422 46.9
BcaB07g33087 Brassica carinata HOM05D002776 ORTHO05D011320 1.0e-75 288.1 209 74.6
A08p09940 Brassica napus HOM05D002776 ORTHO05D003044 3.6e-73 279.6 179 82.1
C01p48980 Brassica napus HOM05D002776 ORTHO05D003542 5.2e-72 275.8 421 45.6
C03p75860 Brassica napus HOM05D002776 ORTHO05D003044 9.8e-71 271.6 179 79.3
C09p27490 Brassica napus HOM05D002776 ORTHO05D003044 1.4e-69 267.7 459 43.6
BcaB07g33753 Brassica carinata HOM05D002776 ORTHO05D011320 3.2e-69 266.5 204 71.1
BraA08t32835Z Brassica rapa HOM05D002776 ORTHO05D011320 5.4e-69 265.8 288 54.9
A01p28530 Brassica napus HOM05D002776 ORTHO05D003044 9.2e-69 265.0 179 77.7
BraA03t15647Z Brassica rapa HOM05D002776 ORTHO05D003044 5.0e-67 259.2 180 77.2
C09p16540 Brassica napus HOM05D002776 ORTHO05D011320 5.6e-66 255.8 446 43.5
A08p07560 Brassica napus HOM05D002776 ORTHO05D003044 1.2e-65 254.6 151 87.4
BcaB06g26760 Brassica carinata HOM05D002776 ORTHO05D008559 1.6e-65 254.2 173 79.2
BolC8t49070H Brassica oleracea HOM05D002776 ORTHO05D011320 2.3e-64 250.4 442 42.8
C02p52040 Brassica napus HOM05D002776 ORTHO05D000395 2.0e-63 247.3 288 52.8
A03p54420 Brassica napus HOM05D002776 ORTHO05D003044 2.6e-63 246.9 328 51.2
C03p56210 Brassica napus HOM05D002776 ORTHO05D003044 5.8e-63 245.7 488 41.8
BcaB01g01630 Brassica carinata HOM05D002776 ORTHO05D011320 1.4e-61 241.1 278 54.0
A08p07570 Brassica napus HOM05D002776 ORTHO05D011320 1.7e-59 234.2 204 65.7
BcaC01g02374 Brassica carinata HOM05D002776 ORTHO05D003044 1.9e-58 230.7 194 65.5
BolC3t18858H Brassica oleracea HOM05D002776 ORTHO05D000395 3.3e-58 229.9 242 56.6
BcaB03g15955 Brassica carinata HOM05D002776 ORTHO05D011320 5.6e-58 229.2 158 75.9
BcaB03g16296 Brassica carinata HOM05D002776 ORTHO05D000395 1.2e-57 228.0 135 83.7
C04p41830 Brassica napus HOM05D002776 ORTHO05D000395 6.2e-57 225.7 242 55.8
C06p18050 Brassica napus HOM05D002776 ORTHO05D000395 3.1e-56 223.4 158 75.3
A01p20500 Brassica napus HOM05D002776 ORTHO05D003044 1.5e-55 221.1 139 82.0
A01p20490 Brassica napus HOM05D002776 ORTHO05D000395 1.3e-54 218.0 158 74.1
A09p29650 Brassica napus HOM05D002776 ORTHO05D000395 1.3e-54 218.0 221 57.9
BraA09t38530Z Brassica rapa HOM05D002776 ORTHO05D000395 1.3e-54 218.0 221 57.9
BraA01t01978Z Brassica rapa HOM05D002776 ORTHO05D003044 1.7e-54 217.6 196 62.8
BcaB06g26484 Brassica carinata HOM05D002776 ORTHO05D000395 2.9e-54 216.9 116 91.4
C03p44570 Brassica napus HOM05D002776 ORTHO05D011320 4.9e-54 216.1 158 72.8
BraA09t38883Z Brassica rapa HOM05D002776 ORTHO05D003044 1.6e-52 211.1 200 61.0
BcaB02g11313 Brassica carinata HOM05D002776 ORTHO05D000395 6.0e-52 209.1 158 71.5
BcaB01g01631 Brassica carinata HOM05D002776 ORTHO05D003044 3.9e-51 206.5 111 94.6
BolC5t32217H Brassica oleracea HOM05D002776 ORTHO05D011320 1.5e-50 204.5 411 41.1
BcaC08g44059 Brassica carinata HOM05D002776 ORTHO05D011320 6.2e-49 199.1 136 76.5
C08p06670 Brassica napus HOM05D002776 ORTHO05D003044 6.2e-49 199.1 139 76.3
BolC2t11289H Brassica oleracea HOM05D002776 ORTHO05D003044 8.1e-49 198.7 197 59.9
BcaB05g23549 Brassica carinata HOM05D002776 ORTHO05D091522 1.1e-48 198.4 277 45.1
BolC3t17909H Brassica oleracea HOM05D002776 ORTHO05D003044 1.1e-48 198.4 197 59.9
BcaC05g26787 Brassica carinata HOM05D002776 ORTHO05D011320 6.8e-48 195.7 199 58.3
BcaB06g27028 Brassica carinata HOM05D002776 ORTHO05D003044 8.9e-48 195.3 104 91.3
BcaB06g26729 Brassica carinata HOM05D002776 ORTHO05D000395 2.6e-47 193.7 355 42.3
BcaB04g18118 Brassica carinata HOM05D002776 ORTHO05D000395 1.3e-46 191.4 204 57.8
BcaB07g33314 Brassica carinata HOM05D002776 ORTHO05D003044 1.7e-46 191.0 99 92.9
BcaB01g03188 Brassica carinata HOM05D002776 ORTHO05D003044 7.1e-45 185.7 103 90.3
BcaB04g17428 Brassica carinata HOM05D002776 ORTHO05D091936 2.1e-44 184.1 401 36.4
C03p80440 Brassica napus HOM05D002776 ORTHO05D011320 3.6e-41 173.3 322 40.1
BcaC03g14316 Brassica carinata HOM05D002776 ORTHO05D011320 8.4e-38 162.2 98 82.7
BcaC06g36687 Brassica carinata HOM05D002776 ORTHO05D011320 1.1e-37 161.8 97 83.5
A07p02050 Brassica napus HOM05D002776 ORTHO05D003044 2.4e-37 160.6 202 51.5
BcaB07g33086 Brassica carinata HOM05D002776 ORTHO05D003044 1.0e-35 155.2 81 90.1
BcaB03g15954 Brassica carinata HOM05D002776 ORTHO05D095932 1.3e-35 154.8 86 90.7
BcaC07g39108 Brassica carinata HOM05D002776 ORTHO05D000395 1.7e-35 154.5 108 75.9
C05p44730 Brassica napus HOM05D002776 ORTHO05D000395 6.6e-35 152.5 102 75.5
BcaC02g10286 Brassica carinata HOM05D002776 ORTHO05D011320 1.1e-34 151.8 127 63.8
BcaC05g25874 Brassica carinata HOM05D002776 ORTHO05D003044 1.9e-34 151.0 94 80.9
BcaB03g16195 Brassica carinata HOM05D002776 ORTHO05D003044 5.6e-34 149.4 76 93.4
BcaB02g11226 Brassica carinata HOM05D002776 ORTHO05D003044 6.2e-33 146.0 96 76.0
C01p34330 Brassica napus HOM05D001224 ORTHO05D023838 8.1e-33 145.6 296 35.5
BolC1t03403H Brassica oleracea HOM05D001224 ORTHO05D023838 8.1e-33 145.6 296 35.5
BcaC09g49626 Brassica carinata HOM05D002776 ORTHO05D023838 2.4e-32 144.1 311 34.7
BcaC05g27518 Brassica carinata HOM05D002776 ORTHO05D000395 3.1e-32 143.7 179 50.8
BcaC06g33588 Brassica carinata HOM05D002776 ORTHO05D011320 2.2e-30 137.5 110 66.4
BraA07t28346Z Brassica rapa HOM05D002776 ORTHO05D000395 6.4e-30 136.0 369 35.8
BcaB01g01817 Brassica carinata HOM05D002776 ORTHO05D003044 4.2e-29 133.3 66 93.9
BcaB02g06428 Brassica carinata HOM05D002776 ORTHO05D011320 4.2e-29 133.3 70 90.0
BcaC02g09112 Brassica carinata HOM05D002776 ORTHO05D011320 7.1e-29 132.5 127 59.1
BraA09t38884Z Brassica rapa HOM05D002776 ORTHO05D000395 9.3e-29 132.1 235 44.7
BcaB06g27029 Brassica carinata HOM05D002776 ORTHO05D011320 1.2e-28 131.7 88 77.3
BcaB03g16160 Brassica carinata HOM05D002776 ORTHO05D003044 1.3e-27 128.3 171 45.0
BcaB07g32915 Brassica carinata HOM05D002776 ORTHO05D003044 4.3e-26 123.2 340 31.8
BraA01t03051Z Brassica rapa HOM05D002776 ORTHO05D003044 3.7e-25 120.2 76 80.3
BcaC08g43735 Brassica carinata HOM05D002776 ORTHO05D003044 1.1e-24 118.6 73 82.2
BcaB07g32988 Brassica carinata HOM05D002776 ORTHO05D003044 9.9e-23 112.1 102 57.8
BcaB04g17778 Brassica carinata HOM05D002776 ORTHO05D003044 7.1e-21 105.9 91 64.8
C01p44940 Brassica napus HOM05D002776 ORTHO05D003044 9.3e-21 105.5 63 82.5
C05p44740 Brassica napus HOM05D002776 ORTHO05D003044 9.3e-21 105.5 63 82.5
BcaB07g33215 Brassica carinata HOM05D002776 ORTHO05D003044 2.3e-19 100.9 106 54.7
BcaC05g25875 Brassica carinata HOM05D002776 ORTHO05D011320 6.7e-19 99.4 51 88.2
BcaC08g47023 Brassica carinata HOM05D002776 ORTHO05D095602 8.7e-19 99.0 78 66.7
BcaC09g50108 Brassica carinata HOM05D002776 ORTHO05D011320 1.9e-18 97.8 70 75.7
BcaB03g16297 Brassica carinata HOM05D002776 ORTHO05D003044 3.3e-18 97.1 51 94.1
C03p44580 Brassica napus HOM05D002776 ORTHO05D003044 1.4e-16 91.7 54 81.5
BraA01t03052Z Brassica rapa HOM05D002776 ORTHO05D000395 1.4e-16 91.7 179 40.8
BolC6t36241H Brassica oleracea HOM05D002776 ORTHO05D003044 2.2e-14 84.3 92 53.3
A04p11170 Brassica napus HOM05D001224 ORTHO05D023838 2.9e-14 84.0 144 38.9
BcaB01g04536 Brassica carinata HOM05D002776 ORTHO05D011320 4.9e-14 83.2 97 54.6
BraA08t32607Z Brassica rapa HOM05D002776 ORTHO05D000395 1.1e-13 82.0 66 66.7
A08p06070 Brassica napus HOM05D002776 ORTHO05D011320 1.9e-13 81.3 91 52.7
C09p28510 Brassica napus HOM05D002776 ORTHO05D000395 3.0e-11 73.9 170 38.2
BraA04t16781Z Brassica rapa HOM05D001224 ORTHO05D023838 5.1e-11 73.2 149 37.6
BcaB02g11276 Brassica carinata HOM05D002776 ORTHO05D092224 1.9e-10 71.2 172 33.7
BolC9t55017H Brassica oleracea HOM05D002776 ORTHO05D003044 4.3e-10 70.1 42 81.0
BcaC02g08297 Brassica carinata HOM05D002776 ORTHO05D003044 2.2e-09 67.8 36 80.6
BcaB05g23122 Brassica carinata HOM05D002776 ORTHO05D094231 2.8e-09 67.4 275 27.3
BcaC06g35068 Brassica carinata HOM05D002776 ORTHO05D012331 6.9e-08 62.8 85 45.9
BcaC06g36171 Brassica carinata HOM05D001224 ORTHO05D014478 9.0e-08 62.4 55 56.4
C07p06950 Brassica napus HOM05D001224 ORTHO05D003044 9.0e-08 62.4 55 56.4
BolC4t26388H Brassica oleracea HOM05D001224 ORTHO05D000395 9.0e-08 62.4 55 56.4
BcaC08g43834 Brassica carinata HOM05D001224 ORTHO05D014478 1.5e-07 61.6 55 56.4
BcaC08g44195 Brassica carinata HOM05D001224 ORTHO05D014478 1.5e-07 61.6 55 56.4
C07p01210 Brassica napus HOM05D001224 ORTHO05D003044 1.5e-07 61.6 55 56.4
BolC6t36797H Brassica oleracea HOM05D001224 ORTHO05D003044 1.5e-07 61.6 55 56.4
C06p26600 Brassica napus HOM05D001224 ORTHO05D014478 2.0e-07 61.2 55 58.2
C07p01170 Brassica napus HOM05D001224 ORTHO05D003044 2.0e-07 61.2 55 56.4
BcaB04g17485 Brassica carinata HOM05D001224 ORTHO05D019989 2.6e-07 60.8 55 54.5
C01p45390 Brassica napus HOM05D001224 ORTHO05D003044 4.5e-07 60.1 55 54.5
C04p55400 Brassica napus HOM05D001224 ORTHO05D003542 4.5e-07 60.1 55 54.5
C05p44360 Brassica napus HOM05D001224 ORTHO05D014478 4.5e-07 60.1 55 54.5
BolC1t04761H Brassica oleracea HOM05D001224 ORTHO05D003542 4.5e-07 60.1 55 54.5
C09p42330 Brassica napus HOM05D001224 ORTHO05D012331 5.9e-07 59.7 415 24.6
A06p28400 Brassica napus HOM05D001224 ORTHO05D012331 7.7e-07 59.3 72 47.2
BraA06t25784Z Brassica rapa HOM05D001224 ORTHO05D012331 7.7e-07 59.3 72 47.2
BolC8t49590H Brassica oleracea HOM05D001224 ORTHO05D003044 1.0e-06 58.9 50 56.0
BcaC02g12294 Brassica carinata HOM05D001224 ORTHO05D014478 1.3e-06 58.5 55 52.7
BcaC05g28451 Brassica carinata HOM05D001224 ORTHO05D014478 1.3e-06 58.5 55 54.5
C03p58290 Brassica napus HOM05D001224 ORTHO05D003542 1.3e-06 58.5 55 54.5
C04p05510 Brassica napus HOM05D001224 ORTHO05D003542 1.3e-06 58.5 55 52.7
C07p12000 Brassica napus HOM05D001224 ORTHO05D003542 1.3e-06 58.5 55 52.7
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 1.3e-06 58.5 55 52.7
BolC9t57112H Brassica oleracea HOM05D001224 ORTHO05D012331 1.7e-06 58.2 55 54.5
BcaB08g35070 Brassica carinata HOM05D001224 ORTHO05D010571 2.2e-06 57.8 133 35.3
BcaC04g19844 Brassica carinata HOM05D001224 ORTHO05D012331 2.2e-06 57.8 72 45.8
BcaC05g28169 Brassica carinata HOM05D001224 ORTHO05D003044 2.9e-06 57.4 55 52.7
C05p42050 Brassica napus HOM05D001224 ORTHO05D003044 2.9e-06 57.4 55 52.7
C07p00680 Brassica napus HOM05D001224 ORTHO05D003542 3.8e-06 57.0 55 52.7
BolC5t32336H Brassica oleracea HOM05D001224 ORTHO05D018692 3.8e-06 57.0 50 54.0
BraA01t02476Z Brassica rapa HOM05D001224 ORTHO05D003542 3.8e-06 57.0 49 55.1
BcaB06g26317 Brassica carinata HOM05D001224 ORTHO05D010571 5.0e-06 56.6 113 37.2
BcaC02g09037 Brassica carinata HOM05D001224 ORTHO05D014478 8.5e-06 55.8 55 50.9


User provided reference genes

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