Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g35008 Brassica carinata HOM05D010790 ORTHO05D012976 2.8e-52 208.4 109 100.0
Thhalv10000578m.g Eutrema salsugineum HOM05D010790 ORTHO05D012976 2.2e-36 155.6 115 77.4
A09p57950 Brassica napus HOM05D010790 ORTHO05D012976 8.2e-36 153.7 107 79.4
C08p41160 Brassica napus HOM05D010790 ORTHO05D012976 2.4e-35 152.1 107 80.4
BcaB06g27787 Brassica carinata HOM05D010790 ORTHO05D012976 2.7e-34 148.7 111 76.6
BolC4t26680H Brassica oleracea HOM05D010790 ORTHO05D012976 3.5e-34 148.3 107 80.4
BcaC07g41115 Brassica carinata HOM05D010790 ORTHO05D012976 5.9e-34 147.5 106 79.2
BolC8t51683H Brassica oleracea HOM05D010790 ORTHO05D012976 5.9e-34 147.5 106 79.2
BcaC02g08766 Brassica carinata HOM05D010790 ORTHO05D012976 7.7e-34 147.1 107 78.5
C04p50890 Brassica napus HOM05D010790 ORTHO05D012976 7.7e-34 147.1 107 78.5
A04p16400 Brassica napus HOM05D010790 ORTHO05D012976 1.0e-33 146.7 107 78.5
BraA04t17278Z Brassica rapa HOM05D010790 ORTHO05D012976 1.0e-33 146.7 107 78.5
BraA09t41185Z Brassica rapa HOM05D010790 ORTHO05D012976 1.3e-33 146.4 107 77.6
CARHR112830 Cardamine hirsuta HOM05D010790 ORTHO05D012976 5.0e-33 144.4 110 73.6
AT2G21780 Arabidopsis thaliana HOM05D010790 ORTHO05D012976 1.2e-26 123.2 111 66.7
Sp4g00920 Schrenkiella parvula HOM05D010790 ORTHO05D012976 3.8e-25 118.2 107 64.5
AL4G11050 Arabidopsis lyrata HOM05D010790 ORTHO05D012976 4.7e-23 111.3 111 62.2
THA.LOC104824948 Tarenaya hassleriana HOM05D010790 ORTHO05D012976 3.8e-17 91.7 113 59.3
Carub.0007s0126 Capsella rubella HOM05D011586 ORTHO05D013748 2.5e-16 89.0 119 50.4
AL7G11350 Arabidopsis lyrata HOM05D011586 ORTHO05D013748 5.2e-14 81.3 126 50.0
CARHR247350 Cardamine hirsuta HOM05D011586 ORTHO05D013748 4.9e-12 74.7 110 48.2
Thhalv10026548m.g Eutrema salsugineum HOM05D011586 ORTHO05D013748 1.4e-11 73.2 122 49.2
C03p77780 Brassica napus HOM05D011586 ORTHO05D013748 5.4e-11 71.2 117 45.3
BcaNung05433 Brassica carinata HOM05D011586 ORTHO05D013748 1.2e-10 70.1 110 46.4
C01p00480 Brassica napus HOM05D011586 ORTHO05D013748 2.0e-10 69.3 105 47.6
BolC1t00052H Brassica oleracea HOM05D011586 ORTHO05D013748 2.0e-10 69.3 105 47.6
Carub.0004s0083 Capsella rubella HOM05D010790 ORTHO05D012976 4.6e-10 68.2 118 45.8
AT4G39360 Arabidopsis thaliana HOM05D011586 ORTHO05D013748 1.0e-09 67.0 120 47.5
BolC3t20034H Brassica oleracea HOM05D011586 ORTHO05D013748 1.7e-09 66.2 117 43.6
A01p00340 Brassica napus HOM05D011586 ORTHO05D013748 3.9e-09 65.1 104 46.2
BraA01t00042Z Brassica rapa HOM05D011586 ORTHO05D013748 3.9e-09 65.1 104 46.2
Sp7g36510 Schrenkiella parvula HOM05D011586 ORTHO05D013748 5.6e-08 61.2 122 43.4


User provided reference genes

Program Settings