Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g34725 Brassica carinata HOM05D009875 ORTHO05D010512 6.3e-44 180.3 83 100.0
BcaC01g02926 Brassica carinata HOM05D009875 ORTHO05D010512 4.3e-37 157.5 83 85.5
C03p58320 Brassica napus HOM05D009875 ORTHO05D010512 4.3e-37 157.5 83 85.5
BraA09t39592Z Brassica rapa HOM05D009875 ORTHO05D010512 1.7e-36 155.6 81 85.2
BraA09t39591Z Brassica rapa HOM05D009875 ORTHO05D010512 3.1e-35 151.4 83 84.3
A09p40980 Brassica napus HOM05D009875 ORTHO05D010512 9.1e-35 149.8 84 83.3
BolC5t31000H Brassica oleracea HOM05D009875 ORTHO05D010512 1.5e-34 149.1 83 83.1
C05p23010 Brassica napus HOM05D009875 ORTHO05D010512 1.0e-33 146.4 77 85.7
A06p34030 Brassica napus HOM05D009875 ORTHO05D010512 9.4e-32 139.8 77 83.1
BraA06t26337Z Brassica rapa HOM05D009875 ORTHO05D010512 9.4e-32 139.8 77 83.1
C05p23020 Brassica napus HOM05D009875 ORTHO05D010512 4.7e-31 137.5 71 85.9
BolC3t18093H Brassica oleracea HOM05D009875 ORTHO05D010512 7.9e-31 136.7 77 80.5
C03p58310 Brassica napus HOM05D009875 ORTHO05D010512 1.1e-24 116.3 60 81.7
A04p22870 Brassica napus HOM05D025333 ORTHO05D010512 2.0e-13 79.0 79 44.3
CARHR010960 Cardamine hirsuta HOM05D009875 ORTHO05D010512 5.4e-11 70.9 74 45.9
AT1G10747 Arabidopsis thaliana HOM05D009875 ORTHO05D010512 1.2e-10 69.7 72 41.7
CARHR010940 Cardamine hirsuta HOM05D009875 ORTHO05D010512 1.3e-09 66.2 72 41.7
Carub.0001s1029 Capsella rubella HOM05D009875 ORTHO05D010512 2.2e-09 65.5 76 40.8
AT1G10745 Arabidopsis thaliana HOM05D013447 ORTHO05D010512 1.1e-08 63.2 82 42.7
AL4G39490 Arabidopsis lyrata HOM05D009875 ORTHO05D010512 9.4e-08 60.1 71 39.4
Carub.0004s2371 Capsella rubella HOM05D009875 ORTHO05D010512 1.2e-07 59.7 71 42.3
THA.LOC109116590 Tarenaya hassleriana HOM05D024853 ORTHO05D023673 6.1e-07 57.4 76 34.2
AT1G10717 Arabidopsis thaliana HOM05D011357 ORTHO05D010512 8.0e-07 57.0 83 41.0
Carub.0001s1027 Capsella rubella HOM05D009875 ORTHO05D010512 1.0e-06 56.6 83 36.1
Aa31LG1G4090 Aethionema arabicum HOM05D009875 ORTHO05D010512 1.4e-06 56.2 75 41.3
AL1G21602 Arabidopsis lyrata HOM05D011357 ORTHO05D010512 1.8e-06 55.8 68 39.7
AT2G41415 Arabidopsis thaliana HOM05D009875 ORTHO05D010512 1.8e-06 55.8 71 36.6
BolC2t08518H Brassica oleracea HOM05D013447 ORTHO05D010512 8.8e-06 53.5 80 37.5


User provided reference genes

Program Settings