Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g34717 Brassica carinata HOM05D004231 ORTHO05D004814 2.2e-61 238.8 121 100.0
BcaB07g31737 Brassica carinata HOM05D004231 ORTHO05D004814 2.0e-27 125.9 81 80.2
BcaC01g02941 Brassica carinata HOM05D004231 ORTHO05D004814 2.0e-27 125.9 68 92.6
A06p34120 Brassica napus HOM05D004231 ORTHO05D004814 2.0e-27 125.9 68 92.6
C03p58080 Brassica napus HOM05D004231 ORTHO05D004814 2.0e-27 125.9 68 92.6
BolC3t18081H Brassica oleracea HOM05D004231 ORTHO05D004814 2.0e-27 125.9 68 92.6
BraA06t26345Z Brassica rapa HOM05D004231 ORTHO05D004814 2.0e-27 125.9 68 92.6
A09p11260 Brassica napus HOM05D004231 ORTHO05D004814 2.7e-27 125.6 68 91.2
Thhalv10022738m.g Eutrema salsugineum HOM05D004231 ORTHO05D004814 2.7e-27 125.6 68 91.2
Sp3g30610 Schrenkiella parvula HOM05D004231 ORTHO05D004814 2.7e-27 125.6 68 91.2
BcaB03g16474 Brassica carinata HOM05D004231 ORTHO05D004814 4.6e-27 124.8 68 91.2
C09p13290 Brassica napus HOM05D004231 ORTHO05D004814 4.6e-27 124.8 68 89.7
BolC9t54222H Brassica oleracea HOM05D004231 ORTHO05D004814 4.6e-27 124.8 68 89.7
A07p03760 Brassica napus HOM05D004231 ORTHO05D004814 5.9e-27 124.4 68 89.7
C07p06030 Brassica napus HOM05D004231 ORTHO05D004814 5.9e-27 124.4 68 89.7
BraA07t28164Z Brassica rapa HOM05D004231 ORTHO05D004814 5.9e-27 124.4 68 89.7
BraA09t36767Z Brassica rapa HOM05D004231 ORTHO05D004814 5.9e-27 124.4 68 89.7
BcaC04g22982 Brassica carinata HOM05D004231 ORTHO05D004814 1.0e-26 123.6 68 88.2
BcaB03g16477 Brassica carinata HOM05D004231 ORTHO05D004814 1.7e-26 122.9 68 88.2
BcaB03g16478 Brassica carinata HOM05D004231 ORTHO05D004814 1.7e-26 122.9 68 88.2
BolC7t41016H Brassica oleracea HOM05D004231 ORTHO05D004814 1.7e-26 122.9 68 88.2
AL3G50130 Arabidopsis lyrata HOM05D004231 ORTHO05D004814 3.9e-26 121.7 68 89.7
Carub.0003s3121 Capsella rubella HOM05D004231 ORTHO05D004814 3.9e-26 121.7 68 89.7
CARHR293610 Cardamine hirsuta HOM05D004231 ORTHO05D004814 3.9e-26 121.7 68 89.7
AT2G17265 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 5.0e-26 121.3 68 88.2
Aa31LG2G14870 Aethionema arabicum HOM05D004231 ORTHO05D004814 4.3e-25 118.2 79 77.2
Carub.0007s0500 Capsella rubella HOM05D004231 ORTHO05D004814 1.5e-22 109.8 71 80.3
CARHR243620 Cardamine hirsuta HOM05D004231 ORTHO05D004814 7.5e-22 107.5 71 76.1
Cpa.g.sc60.14 Carica papaya HOM05D004231 ORTHO05D004814 2.2e-21 105.9 67 76.1
Aqoxy1G01703 Aquilegia oxysepala HOM05D004231 ORTHO05D004814 1.6e-19 99.8 91 58.2
PGR042G2635 Punica granatum HOM05D004231 ORTHO05D004814 1.6e-19 99.8 77 62.3
Sopen04g003940 Solanum pennellii HOM05D004231 ORTHO05D004814 2.0e-19 99.4 83 60.2
Solyc04g008760.3 Solanum lycopersicum HOM05D004231 ORTHO05D004814 2.7e-19 99.0 83 60.2
PGSC0003DMG400025309 Solanum tuberosum HOM05D004231 ORTHO05D004814 2.7e-19 99.0 83 60.2
CSS0007201 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 6.0e-19 97.8 83 61.4
Cc11_g00240 Coffea canephora HOM05D004231 ORTHO05D004814 6.0e-19 97.8 69 66.7
LjContig00081g0001175 Lotus japonicus HOM05D004231 ORTHO05D004814 6.0e-19 97.8 92 56.5
ClCG02G003360 Citrullus lanatus HOM05D004231 ORTHO05D004814 1.0e-18 97.1 94 52.1
MELO3C015708.2 Cucumis melo HOM05D004231 ORTHO05D004814 1.3e-18 96.7 94 52.1
CsaV3_7G001970 Cucumis sativus L. HOM05D004231 ORTHO05D004814 1.3e-18 96.7 94 52.1
Nitab4.5_0000129g0030 Nicotiana tabacum HOM05D004231 ORTHO05D004814 1.3e-18 96.7 88 56.8
Nitab4.5_0008730g0040 Nicotiana tabacum HOM05D004231 ORTHO05D004814 1.3e-18 96.7 88 56.8
Potri.004G207000 Populus trichocarpa HOM05D004231 ORTHO05D004814 1.3e-18 96.7 68 66.2
Potri.009G168400 Populus trichocarpa HOM05D004231 ORTHO05D004814 1.3e-18 96.7 68 66.2
PGSC0003DMG400014663 Solanum tuberosum HOM05D000109 ORTHO05D004814 1.3e-18 96.7 83 60.2
Peaxi162Scf00362g00110 Petunia axillaris HOM05D004231 ORTHO05D004814 1.7e-18 96.3 83 60.2
SHI25239 Sapria himalayana HOM05D004231 ORTHO05D004814 1.7e-18 96.3 71 63.4
Sopen01g054320 Solanum pennellii HOM05D004231 ORTHO05D004814 1.7e-18 96.3 83 60.2
FvH4_2g16830 Fragaria vesca HOM05D004231 ORTHO05D004814 2.3e-18 95.9 87 56.3
FAN24G0296 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.3e-18 95.9 87 56.3
Prupe.8G180500 Prunus persica HOM05D004231 ORTHO05D004814 2.3e-18 95.9 107 48.6
Sabra04G0139300 Salix brachista HOM05D004231 ORTHO05D004814 2.3e-18 95.9 68 64.7
Actinidia17992 Actinidia chinensis HOM05D004231 ORTHO05D004814 3.0e-18 95.5 64 75.0
CANSAT25G0301 Cannabis sativa HOM05D004231 ORTHO05D004814 3.0e-18 95.5 81 55.6
Ciclev10028700m.g Citrus clementina HOM05D004231 ORTHO05D004814 3.0e-18 95.5 66 68.2
Oeu005953.1 Olea europaea HOM05D004231 ORTHO05D004814 3.0e-18 95.5 80 58.8
FAN27G2171 Fragaria x ananassa HOM05D004231 ORTHO05D004814 3.9e-18 95.1 87 55.2
Manes.01G017200 Manihot esculenta HOM05D004231 ORTHO05D004814 3.9e-18 95.1 86 54.7
CAN.G5871.1 Capsicum annuum HOM05D004231 ORTHO05D004814 5.0e-18 94.7 61 67.2
Nn7g36283 Nelumbo nucifera HOM05D004231 ORTHO05D004814 5.0e-18 94.7 90 57.8
Dinv14175 Davidia involucrata HOM05D004231 ORTHO05D004814 6.6e-18 94.4 66 71.2
Lsat_1_v5_gn_8_121420 Lactuca sativa HOM05D004231 ORTHO05D004814 6.6e-18 94.4 78 56.4
Sed0021373 Sechium edule HOM05D004231 ORTHO05D004814 6.6e-18 94.4 68 66.2
SGA_v2.0_scaffold36G14389 Striga asiatica HOM05D004231 ORTHO05D004814 6.6e-18 94.4 77 61.0
FAN15G0610 Fragaria x ananassa HOM05D004231 ORTHO05D004814 8.6e-18 94.0 87 55.2
RcHm_v2.0_Chr6g0280961 Rosa chinensis HOM05D004231 ORTHO05D004814 8.6e-18 94.0 87 56.3
HanXRQChr16g0515121 Helianthus annuus HOM05D004231 ORTHO05D004814 1.5e-17 93.2 67 67.2
Thecc.02G146400 Theobroma cacao HOM05D004231 ORTHO05D004814 1.5e-17 93.2 68 64.7
Atru.chr5.3560 Acer truncatum HOM05D004231 ORTHO05D004814 1.9e-17 92.8 66 65.2
MD10G1142000 Malus domestica HOM05D004231 ORTHO05D004814 1.9e-17 92.8 81 56.8
Nitab4.5_0000783g0100 Nicotiana tabacum HOM05D004231 ORTHO05D004814 1.9e-17 92.8 92 56.5
MSTRG.25000 Avicennia marina HOM05D004231 ORTHO05D004814 2.5e-17 92.4 68 66.2
ECA233G1094 Erigeron canadensis HOM05D004231 ORTHO05D004814 2.5e-17 92.4 59 71.2
Migut.N00847 Erythranthe guttata HOM05D004231 ORTHO05D004814 2.5e-17 92.4 79 58.2
QL05p043527 Quercus lobata HOM05D004231 ORTHO05D004814 2.5e-17 92.4 68 66.2
Hma1.2p1_0652F.1_g195880 Hydrangea macrophylla HOM05D004231 ORTHO05D004814 3.3e-17 92.0 66 68.2
Cfa005374 Carpinus fangiana HOM05D004231 ORTHO05D004814 4.3e-17 91.7 84 57.1
Peaxi162Scf00329g00312 Petunia axillaris HOM05D004231 ORTHO05D004814 4.3e-17 91.7 95 49.5
Sed0027682 Sechium edule HOM05D004231 ORTHO05D004814 4.3e-17 91.7 78 57.7
CSS0030147 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 7.3e-17 90.9 76 61.8
Duzib052G0175 Durio zibethinus HOM05D004231 ORTHO05D004814 7.3e-17 90.9 77 57.1
Nn2g15251 Nelumbo nucifera HOM05D004231 ORTHO05D004814 7.3e-17 90.9 63 71.4
RhsimUnG0022900 Rhododendron simsii HOM05D004231 ORTHO05D004814 7.3e-17 90.9 60 70.0
Phvul.008G292300 Phaseolus vulgaris HOM05D004231 ORTHO05D004814 1.2e-16 90.1 85 56.5
DCAR_006270 Daucus carota HOM05D004231 ORTHO05D004814 1.6e-16 89.7 67 68.7
ECA236G1252 Erigeron canadensis HOM05D000103 ORTHO05D000049 1.6e-16 89.7 67 62.7
SGA_v2.0_scaffold172G39001 Striga asiatica HOM05D004231 ORTHO05D004814 1.6e-16 89.7 79 58.2
Lsat_1_v5_gn_4_71321 Lactuca sativa HOM05D004231 ORTHO05D004814 2.1e-16 89.4 66 63.6
EL10Ac9g21537 Beta vulgaris HOM05D004231 ORTHO05D004814 2.8e-16 89.0 82 57.3
MBI15_g18193_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 2.8e-16 89.0 85 50.6
SalBow7G0905 Salvia bowleyana HOM05D004231 ORTHO05D004814 2.8e-16 89.0 79 57.0
Sc08g0002160 Simmondsia chinensis HOM05D004231 ORTHO05D004814 2.8e-16 89.0 63 66.7
Ah.01g009950 Amaranthus hybridus HOM05D004231 ORTHO05D004814 3.6e-16 88.6 74 58.1
PSO782G1111 Papaver somniferum HOM05D004231 ORTHO05D004814 3.6e-16 88.6 91 52.7
Glyma.14G001000 Glycine max HOM05D004231 ORTHO05D004814 4.7e-16 88.2 77 57.1
PSO541G6356 Papaver somniferum HOM05D004231 ORTHO05D004814 4.7e-16 88.2 116 45.7
PSO675G1855 Papaver somniferum HOM05D004231 ORTHO05D004814 4.7e-16 88.2 94 51.1
unitig_0.g2083 Utricularia gibba HOM05D004231 ORTHO05D004814 4.7e-16 88.2 86 53.5
CiPaw.05G093400 Carya illinoinensis HOM05D004231 ORTHO05D004814 6.2e-16 87.8 77 55.8
PSO063G5124 Papaver somniferum HOM05D004231 ORTHO05D004814 6.2e-16 87.8 91 52.7
arahy.Tifrunner.gnm1.ann1.3XUX0K Arachis hypogaea HOM05D004231 ORTHO05D004814 8.1e-16 87.4 68 63.2
arahy.Tifrunner.gnm1.ann1.9M6UE0 Arachis hypogaea HOM05D004231 ORTHO05D004814 8.1e-16 87.4 68 63.2
CiPaw.06G115200 Carya illinoinensis HOM05D004231 ORTHO05D004814 8.1e-16 87.4 86 51.2
Ca_10777_v3 Cicer arietinum L. HOM05D004231 ORTHO05D004814 8.1e-16 87.4 57 71.9
Lalb_Chr12g0208621 Lupinus albus HOM05D004231 ORTHO05D004814 8.1e-16 87.4 68 58.8
QL06p003747 Quercus lobata HOM05D003236 ORTHO05D003620 1.1e-15 87.0 67 61.2
BcaC06g36249 Brassica carinata HOM05D004231 ORTHO05D004814 1.4e-15 86.7 50 84.0
TWI75G1214 Tripterygium wilfordii HOM05D004231 ORTHO05D004814 1.4e-15 86.7 66 59.1
CDE05G1267 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 1.8e-15 86.3 67 58.2
Lalb_Chr07g0189301 Lupinus albus HOM05D004231 ORTHO05D004814 1.8e-15 86.3 72 58.3
Medtr5g099180 Medicago truncatula HOM05D004231 ORTHO05D004814 2.3e-15 85.9 67 64.2
CDE05G2018 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 3.1e-15 85.5 78 50.0
TPR.G5084 Trifolium pratense HOM05D004231 ORTHO05D004814 4.0e-15 85.1 58 69.0
TPR.G18636 Trifolium pratense HOM05D004231 ORTHO05D004814 5.2e-15 84.7 58 67.2
arahy.Tifrunner.gnm1.ann1.H05BEB Arachis hypogaea HOM05D004231 ORTHO05D004814 6.8e-15 84.3 84 54.8
Psat2g000800 Pisum sativum HOM05D004231 ORTHO05D004814 1.2e-14 83.6 58 69.0
QL03p013131 Quercus lobata HOM05D004231 ORTHO05D004814 1.2e-14 83.6 69 58.0
VMungo0331G0717 Vigna mungo HOM05D004231 ORTHO05D004814 2.0e-14 82.8 76 56.6
ATR0810G109 Amborella trichopoda HOM05D004231 ORTHO05D004814 4.4e-14 81.6 69 53.6
VMungo0647G1050 Vigna mungo HOM05D004231 ORTHO05D004814 4.4e-14 81.6 77 54.5
MBI18_g17319_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 9.8e-14 80.5 59 61.0
AUR62010176 Chenopodium quinoa HOM05D004231 ORTHO05D004814 3.7e-13 78.6 60 63.3
AUR62013177 Chenopodium quinoa HOM05D004231 ORTHO05D004814 3.7e-13 78.6 60 63.3
Pp3c5_14900 Physcomitrium patens HOM05D004231 ORTHO05D004814 4.9e-13 78.2 68 60.3
SMO351G0181 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 4.9e-13 78.2 71 52.1
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 6.4e-13 77.8 71 54.9
ATR0177G062 Amborella trichopoda HOM05D004231 ORTHO05D004814 1.4e-12 76.6 69 52.2
COL.COLO4_34312 Corchorus olitorius HOM05D000109 ORTHO05D000520 1.4e-12 76.6 82 56.1
Mapoly0173s0009 Marchantia polymorpha HOM05D004231 ORTHO05D004814 1.4e-12 76.6 74 48.6
Psat2g000680 Pisum sativum HOM05D004231 ORTHO05D004814 2.4e-12 75.9 63 58.7
QL08p042586 Quercus lobata HOM05D004231 ORTHO05D004814 3.2e-12 75.5 68 52.9
HPP92_007738 Vanilla planifolia HOM05D004231 ORTHO05D004814 2.1e-11 72.8 60 58.3
FAN07G1153 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.7e-10 69.7 50 66.0
FAN15G0284 Fragaria x ananassa HOM05D004231 ORTHO05D004814 3.0e-10 68.9 50 66.0
Os02g0831800 Oryza sativa ssp. japonica HOM05D004231 ORTHO05D004814 3.0e-10 68.9 98 46.9
SEGI_38009 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 3.0e-10 68.9 60 55.0
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 8.6e-10 67.4 72 45.8
FAN05G5401 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.1e-09 67.0 50 64.0
FAN05G3570 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.2e-08 63.5 50 62.0
FAN25G3338 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.1e-08 62.8 50 60.0
FvH4_3g29830 Fragaria vesca HOM05D004126 ORTHO05D004818 1.4e-07 60.1 45 66.7
MBI10_g41732_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 4.0e-07 58.5 71 45.1
FAN04G2646 Fragaria x ananassa HOM05D004231 ORTHO05D004814 5.2e-07 58.2 50 56.0
GSVIVG01023624001 Vitis vinifera HOM05D004231 ORTHO05D004814 1.2e-06 57.0 38 73.7
Cre02.g082250 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 5.8e-06 54.7 59 49.2


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