Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g34715 Brassica carinata HOM05D002304 ORTHO05D002363 1.7e-63 245.7 119 100.0
BcaC09g49903 Brassica carinata HOM05D002304 ORTHO05D002363 5.1e-31 137.9 125 61.6
C01p31480 Brassica napus HOM05D002304 ORTHO05D002363 5.1e-31 137.9 125 61.6
BolC1t03082H Brassica oleracea HOM05D002304 ORTHO05D002363 5.1e-31 137.9 125 61.6
BraA01t02431Z Brassica rapa HOM05D002304 ORTHO05D002363 5.3e-28 127.9 110 63.6
A01p25210 Brassica napus HOM05D002304 ORTHO05D002363 1.2e-27 126.7 110 62.7
Thhalv10010601m.g Eutrema salsugineum HOM05D002304 ORTHO05D002363 2.9e-26 122.1 143 53.8
Sp5g13230 Schrenkiella parvula HOM05D002304 ORTHO05D002363 1.9e-25 119.4 134 54.5
BcaB05g22986 Brassica carinata HOM05D002304 ORTHO05D002363 7.9e-24 114.0 124 56.5
AL5G28310 Arabidopsis lyrata HOM05D002304 ORTHO05D002363 2.8e-21 105.5 143 52.4
Carub.0005s1496 Capsella rubella HOM05D002304 ORTHO05D002363 8.2e-21 104.0 143 52.4
AT3G48800 Arabidopsis thaliana HOM05D002304 ORTHO05D002363 4.1e-20 101.7 135 52.6
CARHR157610 Cardamine hirsuta HOM05D002304 ORTHO05D002363 1.3e-18 96.7 137 49.6
Aa31LG4G17340 Aethionema arabicum HOM05D002304 ORTHO05D002363 7.9e-16 87.4 115 49.6
C08p23820 Brassica napus HOM05D002304 ORTHO05D002363 1.1e-12 77.0 89 53.9
BraA06t24973Z Brassica rapa HOM05D002304 ORTHO05D002363 1.2e-11 73.6 91 53.8
A06p18900 Brassica napus HOM05D002304 ORTHO05D002363 1.5e-11 73.2 92 53.3
BcaC07g39360 Brassica carinata HOM05D002304 ORTHO05D002363 3.4e-11 72.0 82 54.9
BolC8t50008H Brassica oleracea HOM05D002304 ORTHO05D002363 3.4e-11 72.0 91 52.7
THA.LOC104821531 Tarenaya hassleriana HOM05D002304 ORTHO05D002363 1.4e-09 66.6 141 40.4
Sp2g23550 Schrenkiella parvula HOM05D002304 ORTHO05D002363 3.2e-09 65.5 143 35.7
AT5G23680 Arabidopsis thaliana HOM05D002304 ORTHO05D002363 7.4e-06 54.3 88 37.5
THA.LOC104798920 Tarenaya hassleriana HOM05D002304 ORTHO05D002363 7.4e-06 54.3 150 35.3
BcaNung05210 Brassica carinata HOM05D002304 ORTHO05D002363 9.7e-06 53.9 77 42.9
CARHR189880 Cardamine hirsuta HOM05D002304 ORTHO05D002363 9.7e-06 53.9 126 33.3


User provided reference genes

Program Settings