Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g34712 Brassica carinata HOM05D004342 ORTHO05D011040 4.5e-76 287.7 134 100.0
BcaB03g16622 Brassica carinata HOM05D004342 ORTHO05D011040 2.6e-55 218.8 246 50.4
BcaB06g27355 Brassica carinata HOM05D004342 ORTHO05D011040 1.7e-54 216.1 182 61.5
BcaB08g35285 Brassica carinata HOM05D004342 ORTHO05D011040 3.5e-52 208.4 264 47.0
BcaB05g23453 Brassica carinata HOM05D004342 ORTHO05D011040 4.5e-52 208.0 264 46.2
BcaB01g02102 Brassica carinata HOM05D004342 ORTHO05D011040 1.3e-51 206.5 264 47.0
BcaB06g27914 Brassica carinata HOM05D004342 ORTHO05D011040 2.9e-51 205.3 265 45.7
BcaB08g35544 Brassica carinata HOM05D004342 ORTHO05D011040 3.8e-51 204.9 253 47.8
BcaB02g06560 Brassica carinata HOM05D004342 ORTHO05D011040 3.2e-50 201.8 252 47.2
BcaB07g33971 Brassica carinata HOM05D004342 ORTHO05D011040 3.0e-48 195.3 242 47.1
BcaB02g10664 Brassica carinata HOM05D004342 ORTHO05D011040 9.8e-47 190.3 244 45.9
BcaB06g27477 Brassica carinata HOM05D004342 ORTHO05D011040 3.8e-43 178.3 264 43.2
BolC2t09673H Brassica oleracea HOM05D004342 ORTHO05D042860 5.6e-42 174.5 222 45.0
C04p46690 Brassica napus HOM05D004342 ORTHO05D011040 1.0e-40 170.2 264 38.6
BcaC03g16189 Brassica carinata HOM05D004342 ORTHO05D011040 5.2e-40 167.9 224 43.3
C04p26830 Brassica napus HOM05D004342 ORTHO05D011040 6.8e-40 167.5 264 37.9
C09p56360 Brassica napus HOM05D004342 ORTHO05D011040 5.7e-39 164.5 262 38.5
BcaC03g15908 Brassica carinata HOM05D004342 ORTHO05D011040 2.2e-38 162.5 264 37.1
BolC4t26257H Brassica oleracea HOM05D004342 ORTHO05D011040 1.1e-37 160.2 273 37.0
BolC4t24121H Brassica oleracea HOM05D004342 ORTHO05D011040 1.4e-37 159.8 273 36.6
BcaC04g19377 Brassica carinata HOM05D004342 ORTHO05D011040 2.4e-37 159.1 263 38.4
C02p26240 Brassica napus HOM05D004342 ORTHO05D040487 5.4e-37 157.9 136 57.4
BolC2t08690H Brassica oleracea HOM05D004342 ORTHO05D040487 7.0e-37 157.5 136 58.1
BcaB08g35403 Brassica carinata HOM05D004342 ORTHO05D011040 8.6e-35 150.6 244 37.7
BolC5t32015H Brassica oleracea HOM05D004342 ORTHO05D041540 8.6e-35 150.6 214 40.2
BcaC08g47011 Brassica carinata HOM05D004342 ORTHO05D011040 1.5e-34 149.8 264 38.6
A01p25070 Brassica napus HOM05D004342 ORTHO05D011040 1.9e-34 149.4 204 45.1
A02p29080 Brassica napus HOM05D004342 ORTHO05D042860 1.9e-34 149.4 213 40.8
C05p32840 Brassica napus HOM05D004342 ORTHO05D041540 1.9e-34 149.4 214 40.2
BraA02t07939Z Brassica rapa HOM05D004342 ORTHO05D107931 2.5e-34 149.1 275 34.9
BcaB04g18145 Brassica carinata HOM05D004342 ORTHO05D011040 1.6e-33 146.4 260 38.5
BcaB03g16647 Brassica carinata HOM05D004342 ORTHO05D011040 3.6e-33 145.2 266 35.3
BcaB08g35473 Brassica carinata HOM05D004342 ORTHO05D011040 8.0e-33 144.1 266 35.0
BcaB01g01402 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-32 142.9 266 35.0
BcaB05g23589 Brassica carinata HOM05D004342 ORTHO05D011040 2.3e-32 142.5 273 35.2
BolC9t58505H Brassica oleracea HOM05D004342 ORTHO05D011040 4.0e-32 141.7 264 36.0
BcaB06g27861 Brassica carinata HOM05D004342 ORTHO05D011040 8.9e-32 140.6 75 85.3
C02p48390 Brassica napus HOM05D004342 ORTHO05D011040 8.9e-32 140.6 91 71.4
BolC2t10870H Brassica oleracea HOM05D004342 ORTHO05D011040 8.9e-32 140.6 91 71.4
BraA04t16111Z Brassica rapa HOM05D004342 ORTHO05D011040 1.2e-31 140.2 263 35.4
C07p14140 Brassica napus HOM05D004342 ORTHO05D014936 3.7e-30 135.2 84 75.0
C02p39690 Brassica napus HOM05D004342 ORTHO05D014936 8.3e-30 134.0 90 70.0
BolC7t41910H Brassica oleracea HOM05D004342 ORTHO05D014936 7.0e-29 131.0 84 73.8
BolC6t36906H Brassica oleracea HOM05D004342 ORTHO05D011040 9.2e-29 130.6 269 33.5
C07p09210 Brassica napus HOM05D004342 ORTHO05D014936 8.6e-27 124.0 90 63.3
BolC7t41332H Brassica oleracea HOM05D004342 ORTHO05D014936 8.6e-27 124.0 90 63.3
A01p28260 Brassica napus HOM05D004342 ORTHO05D014936 2.5e-26 122.5 91 63.7
C03p68080 Brassica napus HOM05D004342 ORTHO05D042288 3.3e-26 122.1 90 65.6
C03p70160 Brassica napus HOM05D004342 ORTHO05D011040 3.3e-26 122.1 237 32.5
BolC3t19031H Brassica oleracea HOM05D004342 ORTHO05D042288 3.3e-26 122.1 90 65.6
BraSC35t45984Z Brassica rapa HOM05D004342 ORTHO05D014936 1.6e-25 119.8 96 62.5
A10p08140 Brassica napus HOM05D004342 ORTHO05D014936 2.1e-25 119.4 96 63.5
BraA01t02418Z Brassica rapa HOM05D004342 ORTHO05D011040 2.1e-25 119.4 264 33.7
BcaB07g32852 Brassica carinata HOM05D004342 ORTHO05D011040 2.8e-25 119.0 265 33.2
BcaC05g27753 Brassica carinata HOM05D004342 ORTHO05D032754 3.1e-24 115.5 249 32.1
C07p02600 Brassica napus HOM05D004342 ORTHO05D040391 4.0e-24 115.2 251 30.7
BolC7t40658H Brassica oleracea HOM05D004342 ORTHO05D040391 8.9e-24 114.0 251 30.3
BcaB05g23199 Brassica carinata HOM05D004342 ORTHO05D011040 2.6e-23 112.5 90 64.4
BolC8t47411H Brassica oleracea HOM05D004342 ORTHO05D106550 5.8e-23 111.3 142 43.7
BcaB05g23725 Brassica carinata HOM05D004342 ORTHO05D011040 9.8e-23 110.5 264 31.8
BcaB07g33403 Brassica carinata HOM05D004342 ORTHO05D093493 1.4e-21 106.7 90 56.7
BraA07t27945Z Brassica rapa HOM05D004342 ORTHO05D014936 1.9e-21 106.3 88 58.0
BcaB04g17938 Brassica carinata HOM05D004342 ORTHO05D011040 9.2e-21 104.0 52 90.4
BraA10t42852Z Brassica rapa HOM05D004342 ORTHO05D013036 2.7e-20 102.4 52 88.5
BcaB08g35573 Brassica carinata HOM05D004342 ORTHO05D018674 4.6e-20 101.7 50 92.0
A10p05900 Brassica napus HOM05D004342 ORTHO05D013036 6.0e-20 101.3 52 86.5
A03p64730 Brassica napus HOM05D004342 ORTHO05D013036 1.3e-19 100.1 50 90.0
A05p21050 Brassica napus HOM05D004342 ORTHO05D013036 3.0e-19 99.0 55 81.8
BraA10t43034Z Brassica rapa HOM05D004342 ORTHO05D013036 3.0e-19 99.0 52 86.5
A05p24900 Brassica napus HOM05D004342 ORTHO05D013036 5.1e-19 98.2 52 86.5
BraA01t02499Z Brassica rapa HOM05D004342 ORTHO05D013036 5.1e-19 98.2 52 86.5
BraA06t25485Z Brassica rapa HOM05D004342 ORTHO05D013036 5.1e-19 98.2 52 86.5
A06p24190 Brassica napus HOM05D004342 ORTHO05D013036 1.1e-18 97.1 52 84.6
BraA04t16568Z Brassica rapa HOM05D004342 ORTHO05D013036 1.1e-18 97.1 52 84.6
A02p33870 Brassica napus HOM05D004342 ORTHO05D013036 1.9e-18 96.3 52 84.6
BraA02t08405Z Brassica rapa HOM05D004342 ORTHO05D013036 1.9e-18 96.3 52 84.6
A06p23950 Brassica napus HOM05D004342 ORTHO05D013036 2.5e-18 95.9 52 84.6
BcaB02g10428 Brassica carinata HOM05D004342 ORTHO05D018674 5.6e-18 94.7 64 62.5
BolC2t09984H Brassica oleracea HOM05D004342 ORTHO05D107287 7.3e-18 94.4 221 31.2
BraA03t15562Z Brassica rapa HOM05D004342 ORTHO05D014936 9.5e-18 94.0 67 67.2
A06p14130 Brassica napus HOM05D004342 ORTHO05D013036 2.8e-17 92.4 52 80.8
BraA06t24546Z Brassica rapa HOM05D004342 ORTHO05D013036 2.8e-17 92.4 52 80.8
BolC6t36414H Brassica oleracea HOM05D004342 ORTHO05D042454 4.7e-17 91.7 158 36.7
BcaB02g11238 Brassica carinata HOM05D004342 ORTHO05D011040 8.1e-17 90.9 50 78.0
BolC7t40696H Brassica oleracea HOM05D004342 ORTHO05D042740 1.8e-16 89.7 265 29.1
BraA09t39012Z Brassica rapa HOM05D004342 ORTHO05D041860 2.3e-16 89.4 87 51.7
C07p03020 Brassica napus HOM05D004342 ORTHO05D042740 4.0e-16 88.6 265 28.7
C02p40200 Brassica napus HOM05D004342 ORTHO05D014936 6.8e-16 87.8 90 47.8
BraA07t28391Z Brassica rapa HOM05D004342 ORTHO05D014936 1.5e-15 86.7 69 59.4
BolC2t09619H Brassica oleracea HOM05D004342 ORTHO05D033291 2.0e-15 86.3 208 31.2
BcaB07g33226 Brassica carinata HOM05D004342 ORTHO05D014936 3.4e-15 85.5 90 51.1
C08p05970 Brassica napus HOM05D004342 ORTHO05D098872 3.4e-15 85.5 50 70.0
BolC3t19271H Brassica oleracea HOM05D004342 ORTHO05D032754 3.4e-15 85.5 50 68.0
A09p34820 Brassica napus HOM05D004342 ORTHO05D041860 5.8e-15 84.7 79 55.7
C05p37450 Brassica napus HOM05D004342 ORTHO05D032754 1.3e-14 83.6 50 70.0
BolC6t39191H Brassica oleracea HOM05D004342 ORTHO05D041978 1.3e-14 83.6 96 45.8
A10p08150 Brassica napus HOM05D004342 ORTHO05D018674 1.7e-14 83.2 50 68.0
C02p36040 Brassica napus HOM05D004342 ORTHO05D033291 1.7e-14 83.2 202 31.2
BcaC01g01958 Brassica carinata HOM05D004342 ORTHO05D090434 2.2e-14 82.8 50 68.0
C02p40210 Brassica napus HOM05D004342 ORTHO05D018674 8.4e-14 80.9 50 68.0
BraSC35t45983Z Brassica rapa HOM05D004342 ORTHO05D018674 1.4e-13 80.1 50 66.0
C06p17080 Brassica napus HOM05D004342 ORTHO05D016748 9.2e-13 77.4 50 64.0
BolC2t10046H Brassica oleracea HOM05D004342 ORTHO05D018674 9.2e-13 77.4 50 66.0
BolC5t33355H Brassica oleracea HOM05D004342 ORTHO05D016748 9.2e-13 77.4 50 64.0
C05p46270 Brassica napus HOM05D004342 ORTHO05D016748 1.2e-12 77.0 50 66.0
C08p23450 Brassica napus HOM05D004342 ORTHO05D042841 1.2e-12 77.0 84 45.2
BolC8t49973H Brassica oleracea HOM05D004342 ORTHO05D042841 1.2e-12 77.0 84 45.2
C01p35180 Brassica napus HOM05D004342 ORTHO05D028050 1.6e-12 76.6 50 66.0
BolC1t03477H Brassica oleracea HOM05D004342 ORTHO05D028050 1.6e-12 76.6 50 66.0
A01p27340 Brassica napus HOM05D004342 ORTHO05D028050 2.1e-12 76.3 50 68.0
BraA01t02874Z Brassica rapa HOM05D004342 ORTHO05D028050 2.1e-12 76.3 50 68.0
C03p64680 Brassica napus HOM05D004342 ORTHO05D040895 2.7e-12 75.9 50 64.0
BolC3t18726H Brassica oleracea HOM05D004342 ORTHO05D040895 2.7e-12 75.9 50 64.0
A03p66340 Brassica napus HOM05D004342 ORTHO05D018674 3.5e-12 75.5 50 64.0
BraA03t15692Z Brassica rapa HOM05D004342 ORTHO05D018674 3.5e-12 75.5 50 64.0
BolC3t21133H Brassica oleracea HOM05D004342 ORTHO05D016748 6.0e-12 74.7 50 62.0
C06p42390 Brassica napus HOM05D004342 ORTHO05D041978 1.3e-11 73.6 72 50.0
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 3.9e-11 72.0 88 47.7
BolC8t47840H Brassica oleracea HOM05D004342 ORTHO05D016748 3.9e-11 72.0 45 66.7
C04p30590 Brassica napus HOM05D004342 ORTHO05D097110 1.5e-10 70.1 50 58.0
C02p36010 Brassica napus HOM05D004342 ORTHO05D033291 1.2e-09 67.0 64 50.0
A07p06040 Brassica napus HOM05D004342 ORTHO05D101341 2.1e-09 66.2 47 59.6
C03p67290 Brassica napus HOM05D004342 ORTHO05D033138 2.8e-09 65.9 49 59.2
BolSC21t60296H Brassica oleracea HOM05D004342 ORTHO05D033138 2.8e-09 65.9 49 59.2
C06p12600 Brassica napus HOM05D004342 ORTHO05D042454 5.2e-08 61.6 160 31.9
C07p06590 Brassica napus HOM05D004342 ORTHO05D042200 2.0e-07 59.7 40 67.5
BolC7t41081H Brassica oleracea HOM05D004342 ORTHO05D042200 2.0e-07 59.7 40 67.5
BolC3t21022H Brassica oleracea HOM05D004342 ORTHO05D041047 1.3e-06 57.0 64 48.4
C05p42390 Brassica napus HOM05D004342 ORTHO05D041824 1.7e-06 56.6 50 54.0
BolC5t32968H Brassica oleracea HOM05D004342 ORTHO05D041824 1.7e-06 56.6 50 54.0
C02p39700 Brassica napus HOM05D004342 ORTHO05D099964 3.8e-06 55.5 32 68.8


User provided reference genes

Program Settings