Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g34681 Brassica carinata HOM05D009963 ORTHO05D009779 1.7e-154 549.3 270 100.0
BcaB05g23080 Brassica carinata HOM05D009963 ORTHO05D013780 1.2e-123 446.8 315 74.0
BcaB05g23555 Brassica carinata HOM05D009963 ORTHO05D013780 8.8e-63 244.6 152 82.9
BcaB01g01741 Brassica carinata HOM05D009963 ORTHO05D000154 1.7e-50 203.8 151 72.2
BcaB08g35401 Brassica carinata HOM05D009963 ORTHO05D091082 5.7e-46 188.7 189 56.1
BcaB07g33962 Brassica carinata HOM05D009963 ORTHO05D013780 1.4e-39 167.5 154 59.7
BcaB04g17264 Brassica carinata HOM05D009963 ORTHO05D013780 2.0e-38 163.7 140 65.7
BcaB04g18090 Brassica carinata HOM05D009963 ORTHO05D013780 1.1e-33 147.9 84 88.1
BcaB01g01737 Brassica carinata HOM05D009963 ORTHO05D092519 2.9e-29 133.3 149 53.0
BcaB03g16537 Brassica carinata HOM05D009963 ORTHO05D023868 1.4e-23 114.4 64 85.9
BcaB07g33010 Brassica carinata HOM05D009963 ORTHO05D013780 6.8e-23 112.1 53 100.0
BcaB04g16946 Brassica carinata HOM05D009963 ORTHO05D023868 4.4e-22 109.4 64 84.4
BcaC05g27660 Brassica carinata HOM05D009963 ORTHO05D013780 4.4e-22 109.4 79 68.4
C05p36480 Brassica napus HOM05D009963 ORTHO05D013780 4.4e-22 109.4 79 68.4
BcaB08g35291 Brassica carinata HOM05D009963 ORTHO05D000154 7.1e-20 102.1 123 46.3
BcaB05g23007 Brassica carinata HOM05D009963 ORTHO05D000154 1.0e-18 98.2 71 74.6
BcaB08g35926 Brassica carinata HOM05D009963 ORTHO05D013780 2.3e-18 97.1 50 90.0
BcaB04g18322 Brassica carinata HOM05D000365 ORTHO05D000154 4.3e-17 92.8 52 84.6
BcaB06g27697 Brassica carinata HOM05D009963 ORTHO05D023868 3.6e-16 89.7 64 71.9
BolC5t32347H Brassica oleracea HOM05D009963 ORTHO05D013780 1.1e-15 88.2 74 59.5
BcaB01g00737 Brassica carinata HOM05D009963 ORTHO05D013780 1.8e-15 87.4 44 90.9
BcaB06g26581 Brassica carinata HOM05D009963 ORTHO05D023868 2.3e-15 87.0 62 71.0
C03p18690 Brassica napus HOM05D007568 ORTHO05D009779 5.8e-14 82.4 109 36.7
C09p27130 Brassica napus HOM05D007568 ORTHO05D009779 5.8e-14 82.4 109 36.7
A02p32020 Brassica napus HOM05D007568 ORTHO05D009779 1.7e-13 80.9 110 36.4
BraA02t08213Z Brassica rapa HOM05D007568 ORTHO05D009779 1.7e-13 80.9 110 36.4
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 2.2e-13 80.5 108 37.0
BcaC09g50027 Brassica carinata HOM05D007568 ORTHO05D009779 2.2e-13 80.5 110 36.4
BolC9t55448H Brassica oleracea HOM05D007568 ORTHO05D009779 2.9e-13 80.1 109 35.8
A03p65180 Brassica napus HOM05D007568 ORTHO05D009779 3.7e-13 79.7 116 32.8
A03p66080 Brassica napus HOM05D007568 ORTHO05D009779 3.7e-13 79.7 110 36.4
A05p17030 Brassica napus HOM05D007568 ORTHO05D009779 3.7e-13 79.7 110 36.4
BcaC02g08832 Brassica carinata HOM05D007568 ORTHO05D009779 4.9e-13 79.3 70 47.1
BolC3t14260H Brassica oleracea HOM05D007568 ORTHO05D009779 8.4e-13 78.6 109 35.8
A01p06890 Brassica napus HOM05D007568 ORTHO05D009779 1.1e-12 78.2 110 35.5
A05p27540 Brassica napus HOM05D007568 ORTHO05D009779 1.1e-12 78.2 113 34.5
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 1.1e-12 78.2 111 35.1
BcaC01g06154 Brassica carinata HOM05D007568 ORTHO05D009779 1.4e-12 77.8 111 36.9
C02p26050 Brassica napus HOM05D007568 ORTHO05D009779 1.4e-12 77.8 113 35.4
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 3.2e-12 76.6 108 33.3
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 3.2e-12 76.6 110 34.5
BcaB04g20792 Brassica carinata HOM05D007568 ORTHO05D009779 1.6e-11 74.3 108 31.5
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 1.6e-11 74.3 108 31.5
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-11 74.3 116 31.9
BcaB04g18340 Brassica carinata HOM05D007568 ORTHO05D009779 2.7e-11 73.6 104 32.7
A03p66230 Brassica napus HOM05D007568 ORTHO05D009779 2.7e-11 73.6 116 31.9
BraA03t15678Z Brassica rapa HOM05D007568 ORTHO05D009779 2.7e-11 73.6 116 31.9
BolC8t51027H Brassica oleracea HOM05D007568 ORTHO05D009779 3.5e-11 73.2 115 34.8
BolC4t25354H Brassica oleracea HOM05D007568 ORTHO05D009779 4.6e-11 72.8 109 33.9
BraA09t40709Z Brassica rapa HOM05D007568 ORTHO05D009779 1.3e-10 71.2 114 35.1
C03p86040 Brassica napus HOM05D007568 ORTHO05D009779 2.3e-10 70.5 111 33.3
BolC2t10349H Brassica oleracea HOM05D007568 ORTHO05D009779 3.0e-10 70.1 91 38.5
BcaB08g35896 Brassica carinata HOM05D009963 ORTHO05D023868 3.9e-10 69.7 51 68.6
BraA03t15576Z Brassica rapa HOM05D007568 ORTHO05D009779 3.9e-10 69.7 81 37.0
BolC4t23434H Brassica oleracea HOM05D007568 ORTHO05D009779 8.6e-10 68.6 72 38.9
C07p00760 Brassica napus HOM05D007568 ORTHO05D009779 5.6e-09 65.9 99 34.3
BolC9t56300H Brassica oleracea HOM05D009963 ORTHO05D013780 2.1e-08 63.9 40 67.5
BcaB04g18026 Brassica carinata HOM05D007568 ORTHO05D009779 8.1e-08 62.0 114 30.7
A08p24970 Brassica napus HOM05D007568 ORTHO05D009779 8.1e-08 62.0 109 28.4
AL8G21940 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-07 61.6 108 28.7
BolC4t26648H Brassica oleracea HOM05D007568 ORTHO05D009779 1.8e-07 60.8 101 30.7
BcaB02g11011 Brassica carinata HOM05D007568 ORTHO05D009779 2.4e-07 60.5 89 32.6
BcaC05g27705 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-07 60.5 167 30.5
C02p34900 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-07 60.5 149 32.9
BolC6t35446H Brassica oleracea HOM05D000353 ORTHO05D000174 2.4e-07 60.5 118 33.9
AL1G50720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.0e-07 59.7 108 27.8
AL2G19900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.0e-07 59.7 108 27.8
AL2G22230 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.0e-07 59.7 108 27.8
AL5G12730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.0e-07 59.7 108 27.8
AL6G41900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.0e-07 59.7 108 27.8
AL7G11630 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.0e-07 59.7 108 27.8
AL9U11480 Arabidopsis lyrata HOM05D000353 ORTHO05D011313 4.0e-07 59.7 108 27.8
BraA09t38076Z Brassica rapa HOM05D000353 ORTHO05D000174 4.0e-07 59.7 113 38.1
BraA01t02637Z Brassica rapa HOM05D000353 ORTHO05D000174 5.2e-07 59.3 121 36.4
A04p07180 Brassica napus HOM05D000353 ORTHO05D000174 8.9e-07 58.5 113 38.1
A07p12890 Brassica napus HOM05D000353 ORTHO05D000174 8.9e-07 58.5 113 38.1
C05p51080 Brassica napus HOM05D000353 ORTHO05D000174 8.9e-07 58.5 108 34.3
BraA09t38700Z Brassica rapa HOM05D000353 ORTHO05D000174 8.9e-07 58.5 121 35.5
AL4G20700 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.2e-06 58.2 154 24.7
C04p11940 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-06 58.2 108 34.3
A03p68730 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-06 57.8 113 38.1
A05p24020 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-06 57.8 113 38.1
BraA04t16943Z Brassica rapa HOM05D000353 ORTHO05D000174 1.5e-06 57.8 113 38.1
BraA08t34238Z Brassica rapa HOM05D000353 ORTHO05D000174 1.5e-06 57.8 113 38.1
C06p01070 Brassica napus HOM05D000353 ORTHO05D000174 2.0e-06 57.4 80 40.0
BolC2t10477H Brassica oleracea HOM05D000353 ORTHO05D000174 2.0e-06 57.4 113 37.2
BraA08t33914Z Brassica rapa HOM05D000353 ORTHO05D000174 2.6e-06 57.0 113 37.2
Carub.0149s0002 Capsella rubella HOM05D000353 ORTHO05D000174 2.6e-06 57.0 112 34.8
C01p30610 Brassica napus HOM05D000353 ORTHO05D000174 4.4e-06 56.2 113 36.3
C09p40850 Brassica napus HOM05D000353 ORTHO05D000174 4.4e-06 56.2 100 38.0
BolC9t56965H Brassica oleracea HOM05D000353 ORTHO05D000174 4.4e-06 56.2 100 38.0
BcaC04g20196 Brassica carinata HOM05D000353 ORTHO05D000174 5.8e-06 55.8 80 37.5
C08p30740 Brassica napus HOM05D000353 ORTHO05D000174 5.8e-06 55.8 123 30.9
BolC6t36043H Brassica oleracea HOM05D007568 ORTHO05D009779 5.8e-06 55.8 69 30.4
AL8G20950 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 7.6e-06 55.5 108 31.5
A07p20380 Brassica napus HOM05D007568 ORTHO05D009779 7.6e-06 55.5 79 34.2
C03p61110 Brassica napus HOM05D000353 ORTHO05D000174 7.6e-06 55.5 113 36.3
BraA06t27230Z Brassica rapa HOM05D000353 ORTHO05D000174 7.6e-06 55.5 100 38.0
Thhalv10000001m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 7.6e-06 55.5 111 27.0
Thhalv10023073m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 7.6e-06 55.5 111 27.0
C09p24300 Brassica napus HOM05D000353 ORTHO05D000174 9.9e-06 55.1 114 32.5
Thhalv10026854m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 9.9e-06 55.1 111 27.9


User provided reference genes

Program Settings