Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g34628 Brassica carinata HOM05D000529 ORTHO05D000472 1.7e-54 215.7 104 100.0
BcaC06g30971 Brassica carinata HOM05D000529 ORTHO05D000472 6.7e-19 97.4 72 68.1
BcaB04g20091 Brassica carinata HOM05D000529 ORTHO05D000472 1.4e-11 73.2 59 61.0
BcaB08g34626 Brassica carinata HOM05D000529 ORTHO05D000472 5.1e-11 71.2 48 70.8
BcaC06g33794 Brassica carinata HOM05D000529 ORTHO05D000472 1.1e-10 70.1 48 66.7
C07p36810 Brassica napus HOM05D000529 ORTHO05D000472 1.1e-10 70.1 48 66.7
BolC7t44194H Brassica oleracea HOM05D000529 ORTHO05D000472 1.1e-10 70.1 48 66.7
AT5G66890 Arabidopsis thaliana HOM05D000529 ORTHO05D000472 2.0e-10 69.3 57 61.4
C07p36760 Brassica napus HOM05D000529 ORTHO05D000472 3.3e-10 68.6 48 66.7
BolC7t44192H Brassica oleracea HOM05D000529 ORTHO05D000472 3.3e-10 68.6 48 66.7
Aa31LG1G15460 Aethionema arabicum HOM05D000529 ORTHO05D000472 3.7e-09 65.1 49 61.2
BolC7t44188H Brassica oleracea HOM05D000529 ORTHO05D000472 4.8e-09 64.7 49 65.3
BraA06t27023Z Brassica rapa HOM05D000529 ORTHO05D000472 6.3e-09 64.3 49 65.3
Thhalv10003662m.g Eutrema salsugineum HOM05D000529 ORTHO05D000472 6.3e-09 64.3 46 67.4
C02p58420 Brassica napus HOM05D000529 ORTHO05D000472 8.2e-09 63.9 49 65.3
AT5G66900 Arabidopsis thaliana HOM05D000529 ORTHO05D000472 1.1e-08 63.5 49 63.3
AT5G66910 Arabidopsis thaliana HOM05D000529 ORTHO05D000472 1.1e-08 63.5 51 62.7
BcaC04g23170 Brassica carinata HOM05D000529 ORTHO05D000472 1.8e-08 62.8 47 66.0
C09p11430 Brassica napus HOM05D000529 ORTHO05D000472 1.8e-08 62.8 47 66.0
AL8G44500 Arabidopsis lyrata HOM05D000529 ORTHO05D000472 4.1e-08 61.6 49 63.3
C02p64690 Brassica napus HOM05D000529 ORTHO05D000472 5.3e-08 61.2 48 64.6
C07p24850 Brassica napus HOM05D000529 ORTHO05D000472 5.3e-08 61.2 49 61.2
BolC2t12531H Brassica oleracea HOM05D000529 ORTHO05D000472 5.3e-08 61.2 48 64.6
BolC2t10946H Brassica oleracea HOM05D000529 ORTHO05D000472 6.9e-08 60.8 49 61.2
Carub.0008s2759 Capsella rubella HOM05D000529 ORTHO05D000472 6.9e-08 60.8 46 60.9
BcaB04g20245 Brassica carinata HOM05D000529 ORTHO05D000472 9.1e-08 60.5 46 67.4
BcaC03g17818 Brassica carinata HOM05D000529 ORTHO05D000472 1.2e-07 60.1 47 63.8
Sp2g29750 Schrenkiella parvula HOM05D000529 ORTHO05D000472 1.5e-07 59.7 52 55.8
BolC2t11903H Brassica oleracea HOM05D000529 ORTHO05D000472 2.6e-07 58.9 47 63.8
BcaC04g23168 Brassica carinata HOM05D000529 ORTHO05D000472 3.4e-07 58.5 46 65.2
A09p09670 Brassica napus HOM05D000529 ORTHO05D000472 3.4e-07 58.5 46 65.2
C09p11460 Brassica napus HOM05D000529 ORTHO05D000472 3.4e-07 58.5 46 65.2
BraA09t36615Z Brassica rapa HOM05D000529 ORTHO05D000472 3.4e-07 58.5 46 65.2
BolC9t54033H Brassica oleracea HOM05D000529 ORTHO05D000472 4.5e-07 58.2 54 63.0
A02p38850 Brassica napus HOM05D000529 ORTHO05D000472 1.7e-06 56.2 45 60.0
A06p36590 Brassica napus HOM05D000529 ORTHO05D000472 2.2e-06 55.8 47 59.6
BolC9t54031H Brassica oleracea HOM05D000529 ORTHO05D000472 2.2e-06 55.8 46 63.0
BraA06t26585Z Brassica rapa HOM05D000529 ORTHO05D000472 2.2e-06 55.8 47 59.6
AL8G44490 Arabidopsis lyrata HOM05D000529 ORTHO05D000472 2.9e-06 55.5 46 63.0
BcaB02g09973 Brassica carinata HOM05D000529 ORTHO05D000472 2.9e-06 55.5 51 51.0
BraA02t08859Z Brassica rapa HOM05D000529 ORTHO05D000472 2.9e-06 55.5 45 60.0
BcaB04g20089 Brassica carinata HOM05D000529 ORTHO05D000472 3.8e-06 55.1 47 63.8
Thhalv10005443m.g Eutrema salsugineum HOM05D000529 ORTHO05D000472 3.8e-06 55.1 44 61.4
Medtr5g018060 Medicago truncatula HOM05D000529 ORTHO05D000472 6.5e-06 54.3 55 45.5


User provided reference genes

Program Settings