Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 1.4e-93 346.3 170 100.0
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 1.2e-86 323.2 167 93.4
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 1.4e-85 319.7 168 90.5
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 2.3e-85 318.9 168 93.5
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 2.3e-85 318.9 168 93.5
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 2.3e-85 318.9 168 93.5
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 3.9e-85 318.2 168 92.9
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 6.7e-85 317.4 168 89.9
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 2.0e-84 315.8 168 92.3
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 2.8e-83 312.0 168 89.9
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 7.0e-82 307.4 170 88.2
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 1.2e-81 306.6 169 87.6
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 2.0e-76 289.3 170 82.4
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 1.5e-71 273.1 168 75.6
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 6.1e-62 241.1 171 69.0
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 2.2e-59 232.6 172 65.7
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 6.3e-59 231.1 170 64.1
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 2.4e-58 229.2 169 66.9
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 4.1e-58 228.4 171 64.3
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 4.1e-58 228.4 171 64.9
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 7.0e-58 227.6 170 65.3
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 9.2e-58 227.3 170 68.8
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 2.0e-57 226.1 166 63.3
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 2.7e-57 225.7 173 65.3
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 4.5e-57 224.9 166 66.3
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 4.5e-57 224.9 170 65.9
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 5.9e-57 224.6 162 68.5
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 5.9e-57 224.6 172 65.1
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 1.3e-56 223.4 170 67.6
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 1.3e-56 223.4 172 64.5
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 1.7e-56 223.0 162 65.4
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 1.7e-56 223.0 173 63.0
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 2.3e-56 222.6 170 65.9
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 2.9e-56 222.2 165 63.0
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 2.9e-56 222.2 170 64.1
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 2.9e-56 222.2 163 66.9
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 2.9e-56 222.2 170 67.1
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 5.0e-56 221.5 172 62.8
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.1e-55 220.3 165 63.0
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 1.1e-55 220.3 170 63.5
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.1e-55 220.3 172 63.4
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 1.5e-55 219.9 171 64.3
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.9e-55 219.5 164 61.6
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 2.5e-55 219.2 169 64.5
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 3.3e-55 218.8 171 63.7
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 3.3e-55 218.8 170 64.7
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 3.3e-55 218.8 173 62.4
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 3.3e-55 218.8 170 62.9
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 3.3e-55 218.8 169 64.5
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 5.6e-55 218.0 163 65.0
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 5.6e-55 218.0 173 61.3
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 5.6e-55 218.0 158 66.5
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 7.3e-55 217.6 179 60.9
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 1.2e-54 216.9 176 61.4
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 1.6e-54 216.5 168 62.5
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 1.6e-54 216.5 172 60.5
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 1.6e-54 216.5 158 65.8
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 1.6e-54 216.5 173 61.3
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 2.8e-54 215.7 168 63.7
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 2.8e-54 215.7 158 65.8
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 3.6e-54 215.3 164 62.8
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 1.8e-53 213.0 169 63.3
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.8e-53 213.0 173 61.8
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 2.3e-53 212.6 170 62.9
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 3.0e-53 212.2 173 59.5
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 3.0e-53 212.2 172 60.5
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 4.0e-53 211.8 171 60.8
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 5.2e-53 211.5 177 58.2
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 5.2e-53 211.5 166 63.3
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 5.2e-53 211.5 173 60.7
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 1.2e-52 210.3 171 60.2
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 4.4e-52 208.4 167 61.7
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 5.7e-52 208.0 167 63.5
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 5.7e-52 208.0 172 59.3
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 7.5e-52 207.6 167 58.7
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 7.5e-52 207.6 174 60.3
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 7.5e-52 207.6 165 61.8
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 1.3e-51 206.8 176 58.0
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 1.7e-51 206.5 171 58.5
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.7e-51 206.5 163 63.2
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 3.7e-51 205.3 195 54.9
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 4.9e-51 204.9 152 65.1
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 4.9e-51 204.9 159 63.5
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 6.4e-51 204.5 173 59.0
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 8.3e-51 204.1 173 59.5
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 1.1e-50 203.8 164 62.2
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 1.4e-50 203.4 171 59.6
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 7.0e-50 201.1 167 55.7
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 9.2e-50 200.7 173 56.1
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 2.0e-49 199.5 162 61.1
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 1.7e-48 196.4 191 55.0
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 2.3e-48 196.1 148 62.8
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 1.5e-47 193.4 164 57.3
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 3.3e-47 192.2 163 58.3
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 3.3e-47 192.2 161 59.6
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 1.2e-46 190.3 151 61.6
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 1.4e-45 186.8 169 56.8
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 4.0e-45 185.3 168 57.1
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 8.9e-45 184.1 196 50.5
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 5.8e-44 181.4 161 55.3
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 4.9e-43 178.3 174 52.3
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 7.0e-42 174.5 170 52.4
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 3.7e-35 152.1 169 47.9
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 1.9e-34 149.8 192 43.2
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 9.5e-31 137.5 166 42.2
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 2.8e-30 136.0 164 45.7
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 3.6e-30 135.6 167 41.9
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 4.7e-30 135.2 107 64.5
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 3.1e-29 132.5 210 39.5
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 1.2e-28 130.6 158 45.6
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 3.6e-22 109.0 184 35.9
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 4.7e-22 108.6 196 34.2
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 6.2e-22 108.2 185 34.6
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 8.9e-21 104.4 92 57.6
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 1.7e-19 100.1 63 73.0
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 6.4e-19 98.2 194 30.4
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 6.6e-16 88.2 105 49.5
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 2.1e-14 83.2 140 37.1
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 4.8e-14 82.0 179 30.7
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 5.3e-13 78.6 103 45.6
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 2.5e-07 59.7 107 34.6


User provided reference genes

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