Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 2.0e-73 279.3 164 100.0
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 1.7e-61 239.6 159 88.7
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 5.5e-60 234.6 159 88.7
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 1.8e-55 219.5 127 90.6
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 1.2e-54 216.9 131 87.8
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 1.3e-53 213.4 122 90.2
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 1.7e-53 213.0 128 89.1
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 1.7e-53 213.0 128 89.1
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 1.7e-53 213.0 128 89.1
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 2.3e-53 212.6 128 88.3
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 2.5e-52 209.1 124 87.1
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 3.3e-52 208.8 159 82.4
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 2.0e-46 189.5 134 77.6
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 2.6e-41 172.6 128 76.6
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 2.6e-41 172.6 128 76.6
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.7e-40 169.9 132 68.9
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 1.9e-36 156.4 130 63.8
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 2.5e-36 156.0 130 63.1
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 3.3e-36 155.6 130 63.1
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 7.3e-36 154.5 130 63.1
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 1.2e-35 153.7 130 63.8
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 1.6e-35 153.3 136 61.0
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 1.6e-35 153.3 129 62.8
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 4.7e-35 151.8 129 62.0
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 6.2e-35 151.4 98 74.5
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 6.2e-35 151.4 128 63.3
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 8.0e-35 151.0 130 63.8
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 8.0e-35 151.0 128 61.7
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 8.0e-35 151.0 125 64.8
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 1.4e-34 150.2 124 62.9
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 1.4e-34 150.2 122 61.5
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 1.8e-34 149.8 130 61.5
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 2.3e-34 149.4 129 61.2
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 3.1e-34 149.1 125 63.2
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 3.1e-34 149.1 132 60.6
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 4.0e-34 148.7 131 61.1
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 4.0e-34 148.7 128 62.5
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 5.2e-34 148.3 126 60.3
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 5.2e-34 148.3 126 65.1
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 5.2e-34 148.3 129 62.8
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 8.9e-34 147.5 163 59.5
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 1.2e-33 147.1 129 61.2
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.2e-33 147.1 126 61.1
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 1.2e-33 147.1 126 61.1
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 1.2e-33 147.1 154 63.6
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 2.6e-33 146.0 122 62.3
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 2.6e-33 146.0 125 64.8
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 5.8e-33 144.8 98 71.4
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 9.8e-33 144.1 124 62.1
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 9.8e-33 144.1 131 58.8
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 9.8e-33 144.1 130 62.3
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 1.7e-32 143.3 137 56.2
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 4.9e-32 141.7 134 61.9
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 8.3e-32 141.0 131 58.0
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 8.3e-32 141.0 125 60.0
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 1.4e-31 140.2 124 59.7
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 1.4e-31 140.2 133 56.4
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.9e-31 139.8 132 60.6
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 2.4e-31 139.4 132 56.8
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 3.2e-31 139.0 122 60.7
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 4.1e-31 138.7 126 68.3
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 4.1e-31 138.7 122 62.3
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 4.1e-31 138.7 114 63.2
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 4.1e-31 138.7 117 64.1
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 5.4e-31 138.3 91 75.8
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 5.4e-31 138.3 129 58.9
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.2e-30 137.1 136 58.1
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 1.6e-30 136.7 124 60.5
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 1.6e-30 136.7 125 60.0
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 2.1e-30 136.3 124 62.9
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 2.7e-30 136.0 86 79.1
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 2.7e-30 136.0 124 62.1
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 4.6e-30 135.2 114 65.8
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 6.0e-30 134.8 128 59.4
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 6.0e-30 134.8 134 54.5
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 6.0e-30 134.8 123 58.5
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 6.0e-30 134.8 124 60.5
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 6.0e-30 134.8 124 60.5
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 7.8e-30 134.4 119 60.5
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 7.8e-30 134.4 124 62.1
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 7.8e-30 134.4 124 60.5
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 1.0e-29 134.0 86 76.7
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.3e-29 133.7 97 67.0
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.7e-29 133.3 135 59.3
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.7e-29 133.3 123 56.9
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 2.3e-29 132.9 124 57.3
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 2.3e-29 132.9 124 57.3
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 2.3e-29 132.9 124 57.3
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 3.0e-29 132.5 128 65.6
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 3.0e-29 132.5 183 45.4
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 3.0e-29 132.5 112 63.4
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 3.9e-29 132.1 193 53.4
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 6.6e-29 131.3 127 58.3
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 8.6e-29 131.0 102 66.7
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 2.5e-28 129.4 128 56.2
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 5.6e-28 128.3 126 54.8
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 7.3e-28 127.9 167 46.7
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.2e-27 127.1 96 68.8
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 3.6e-27 125.6 120 55.8
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 6.2e-27 124.8 78 78.2
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 1.1e-26 124.0 89 71.9
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 1.4e-26 123.6 78 76.9
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 2.3e-26 122.9 115 58.3
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 3.1e-26 122.5 124 54.0
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 1.5e-25 120.2 130 56.2
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 7.5e-25 117.9 84 69.0
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 2.2e-24 116.3 124 51.6
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 3.7e-24 115.5 104 58.7
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 6.4e-24 114.8 89 65.2
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 3.2e-23 112.5 169 41.4
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 7.1e-23 111.3 93 65.6
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 1.2e-22 110.5 114 52.6
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.2e-22 110.5 110 55.5
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 3.5e-22 109.0 180 46.7
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 2.5e-20 102.8 101 58.4
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 2.5e-20 102.8 102 57.8
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 2.1e-19 99.8 109 52.3
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 1.4e-18 97.1 139 43.2
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 1.2e-17 94.0 110 47.3
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 2.0e-17 93.2 90 54.4
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 7.6e-17 91.3 52 84.6
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 2.1e-14 83.2 52 76.9
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 3.5e-14 82.4 89 55.1
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 5.1e-13 78.6 95 50.5
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.1e-12 77.4 54 68.5
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 9.6e-12 74.3 73 57.5
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 1.5e-09 67.0 80 47.5
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 1.7e-08 63.5 85 56.5
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 2.9e-08 62.8 78 65.4
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 4.2e-07 58.9 67 44.8
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 4.6e-06 55.5 48 58.3


User provided reference genes

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