Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g34581 Brassica carinata HOM05D020738 ORTHO05D008451 2.1e-74 282.3 148 100.0
BcaB01g02975 Brassica carinata HOM05D020738 ORTHO05D008451 4.8e-47 191.4 147 75.5
BolC9t54178H Brassica oleracea HOM05D020738 ORTHO05D031827 3.5e-29 132.1 116 67.2
BraA03t15512Z Brassica rapa HOM05D007009 ORTHO05D031827 3.5e-29 132.1 119 65.5
BcaC04g23032 Brassica carinata HOM05D020738 ORTHO05D031827 4.7e-26 121.7 116 63.8
BcaB03g13693 Brassica carinata HOM05D020738 ORTHO05D090606 1.4e-17 93.6 48 97.9
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 8.9e-17 90.9 140 47.9
BcaC07g38074 Brassica carinata HOM05D020738 ORTHO05D008451 1.2e-13 80.5 91 53.8
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 1.6e-13 80.1 131 45.8
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 8.6e-12 74.3 71 66.2
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 2.5e-11 72.8 70 60.0
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 2.5e-11 72.8 135 45.9
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 2.8e-10 69.3 72 62.5
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 4.7e-10 68.6 141 42.6
BolC8t48483H Brassica oleracea HOM05D007009 ORTHO05D008451 4.7e-10 68.6 151 37.1
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 4.4e-08 62.0 124 40.3
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 4.4e-08 62.0 99 45.5
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 3.8e-07 58.9 111 42.3
AL2G29220 Arabidopsis lyrata HOM05D007009 ORTHO05D008451 8.4e-07 57.8 88 44.3
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 9.2e-06 54.3 120 39.2


User provided reference genes

Program Settings