Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 2.5e-225 785.4 480 100.0
BcaB01g01643 Brassica carinata HOM05D007203 ORTHO05D011558 5.5e-92 342.4 486 54.5
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 2.7e-70 270.4 264 62.1
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 2.9e-69 266.9 570 45.1
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 6.6e-69 265.8 568 41.7
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 8.0e-67 258.8 566 44.9
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.8e-63 247.7 676 40.8
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 3.2e-63 246.9 475 44.6
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 7.0e-63 245.7 512 47.3
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 4.6e-62 243.0 667 40.0
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 5.2e-58 229.6 247 59.5
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 3.9e-53 213.4 479 48.6
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 3.3e-52 210.3 302 49.0
BcaB01g02001 Brassica carinata HOM05D007203 ORTHO05D008395 1.7e-48 198.0 137 83.2
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 2.9e-48 197.2 268 50.0
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 3.7e-48 196.8 296 47.6
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 2.4e-47 194.1 135 76.3
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 4.1e-47 193.4 602 38.9
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 5.4e-47 193.0 254 53.1
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 6.0e-46 189.5 194 62.4
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 7.8e-46 189.1 594 36.9
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 2.3e-45 187.6 591 37.9
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 8.6e-45 185.7 135 73.3
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 3.3e-44 183.7 135 71.9
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 5.6e-44 183.0 407 43.5
BcaB06g26429 Brassica carinata HOM05D007203 ORTHO05D011558 5.2e-42 176.4 98 94.9
BcaB07g32667 Brassica carinata HOM05D003147 ORTHO05D003245 8.9e-42 175.6 128 81.2
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 4.9e-40 169.9 241 49.8
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 7.1e-39 166.0 247 48.6
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 2.7e-38 164.1 517 37.5
BcaB01g01435 Brassica carinata HOM05D007203 ORTHO05D011558 2.3e-37 161.0 339 46.3
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 7.3e-36 156.0 239 56.1
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 1.2e-35 155.2 485 36.5
BcaC05g26664 Brassica carinata HOM05D007203 ORTHO05D095942 4.9e-32 143.3 120 74.2
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 8.4e-32 142.5 137 59.9
BcaB03g16102 Brassica carinata HOM05D007203 ORTHO05D011558 3.2e-31 140.6 86 90.7
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 7.1e-31 139.4 453 33.6
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 9.3e-31 139.0 317 36.6
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 4.6e-30 136.7 206 48.1
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 4.6e-30 136.7 214 48.1
BcaC09g49573 Brassica carinata HOM05D007203 ORTHO05D011558 7.8e-30 136.0 152 57.9
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.0e-29 135.6 440 32.0
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 1.0e-29 135.6 140 59.3
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 5.1e-29 133.3 140 58.6
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 1.9e-28 131.3 137 59.1
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 1.9e-28 131.3 143 57.3
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 2.5e-28 131.0 138 59.4
BcaB03g16432 Brassica carinata HOM05D007203 ORTHO05D011558 3.3e-28 130.6 275 41.8
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 9.6e-28 129.0 138 58.7
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 9.6e-28 129.0 138 58.7
BcaB03g14937 Brassica carinata HOM05D007203 ORTHO05D011558 1.3e-27 128.6 71 94.4
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 2.8e-27 127.5 138 59.4
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 3.6e-27 127.1 141 56.7
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 4.8e-27 126.7 141 58.2
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-26 125.2 141 57.4
BcaB03g16331 Brassica carinata HOM05D007203 ORTHO05D011558 1.8e-26 124.8 114 69.3
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 1.8e-26 124.8 134 58.2
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 4.0e-26 123.6 120 58.3
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 5.3e-26 123.2 106 65.1
BcaB04g19552 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-25 121.7 86 77.9
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 1.5e-25 121.7 464 30.4
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 2.0e-25 121.3 142 52.8
BcaB04g19338 Brassica carinata HOM05D007203 ORTHO05D011558 2.6e-25 120.9 287 35.2
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 4.4e-25 120.2 254 42.1
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 9.9e-25 119.0 90 72.2
C05p35590 Brassica napus HOM05D007203 ORTHO05D039927 9.9e-25 119.0 90 72.2
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 1.7e-24 118.2 156 50.0
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 2.2e-24 117.9 196 42.9
BcaB04g18412 Brassica carinata HOM05D007203 ORTHO05D011558 2.9e-24 117.5 429 35.0
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 3.8e-24 117.1 313 39.0
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 3.2e-23 114.0 109 62.4
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 5.4e-23 113.2 105 60.0
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 5.4e-23 113.2 109 61.5
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 7.1e-23 112.8 112 59.8
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 9.3e-23 112.5 232 40.1
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 2.1e-22 111.3 125 53.6
BcaB02g11368 Brassica carinata HOM05D007203 ORTHO05D011558 2.7e-22 110.9 93 71.0
C03p33440 Brassica napus HOM05D007203 ORTHO05D027708 7.9e-22 109.4 97 67.0
BolC3t17977H Brassica oleracea HOM05D007203 ORTHO05D011558 7.9e-22 109.4 95 67.4
BolC2t09431H Brassica oleracea HOM05D007203 ORTHO05D027708 1.7e-21 108.2 104 64.4
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 1.1e-20 105.5 95 66.3
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 1.9e-20 104.8 58 91.4
C09p28930 Brassica napus HOM05D007203 ORTHO05D008395 2.5e-20 104.4 92 63.0
C01p16070 Brassica napus HOM05D007203 ORTHO05D011558 3.3e-20 104.0 95 65.3
BraA05t21718Z Brassica rapa HOM05D007203 ORTHO05D011558 1.6e-19 101.7 58 89.7
C06p20830 Brassica napus HOM05D007203 ORTHO05D041891 3.6e-19 100.5 326 43.9
BolC6t37269H Brassica oleracea HOM05D007203 ORTHO05D041891 3.6e-19 100.5 326 43.9
BcaC08g43729 Brassica carinata HOM05D007203 ORTHO05D092975 4.8e-19 100.1 127 55.1
BcaB02g11375 Brassica carinata HOM05D007203 ORTHO05D011558 1.4e-18 98.6 159 45.3
BcaC05g27919 Brassica carinata HOM05D007203 ORTHO05D039141 1.4e-18 98.6 103 58.3
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 1.4e-18 98.6 95 63.2
BolC5t32660H Brassica oleracea HOM05D007203 ORTHO05D011558 1.4e-18 98.6 103 58.3
BraA07t28682Z Brassica rapa HOM05D007203 ORTHO05D108101 1.4e-18 98.6 170 44.7
A01p36020 Brassica napus HOM05D007203 ORTHO05D020137 2.4e-18 97.8 127 54.3
C01p47030 Brassica napus HOM05D007203 ORTHO05D020137 2.4e-18 97.8 124 56.5
BraA04t16843Z Brassica rapa HOM05D007203 ORTHO05D020137 3.1e-18 97.4 120 58.3
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 5.3e-18 96.7 178 41.6
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 5.3e-18 96.7 178 41.6
BcaC04g23792 Brassica carinata HOM05D007203 ORTHO05D014981 6.9e-18 96.3 110 56.4
BcaC09g48677 Brassica carinata HOM05D007203 ORTHO05D020137 2.0e-17 94.7 122 56.6
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 3.4e-17 94.0 148 41.2
BolC1t04671H Brassica oleracea HOM05D007203 ORTHO05D020137 4.5e-17 93.6 120 56.7
C03p35500 Brassica napus HOM05D007203 ORTHO05D011558 9.9e-17 92.4 73 68.5
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 1.3e-16 92.0 364 36.8
BcaC04g20467 Brassica carinata HOM05D007203 ORTHO05D027708 1.3e-16 92.0 97 61.9
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 1.3e-16 92.0 81 63.0
C04p52660 Brassica napus HOM05D007203 ORTHO05D020137 1.7e-16 91.7 120 56.7
C08p21920 Brassica napus HOM05D007203 ORTHO05D011558 1.7e-16 91.7 73 68.5
BcaC08g43405 Brassica carinata HOM05D007203 ORTHO05D094647 2.9e-16 90.9 440 34.1
C05p39250 Brassica napus HOM05D007203 ORTHO05D039141 2.9e-16 90.9 455 36.7
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 8.4e-16 89.4 202 40.1
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 1.1e-15 89.0 134 46.3
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 1.4e-15 88.6 98 55.1
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 3.2e-15 87.4 70 67.1
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 4.2e-15 87.0 120 45.0
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 7.1e-15 86.3 110 51.8
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 9.3e-15 85.9 136 39.0
C01p48560 Brassica napus HOM05D007203 ORTHO05D011558 2.1e-14 84.7 90 60.0
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-14 84.7 67 67.2
BolC1t01561H Brassica oleracea HOM05D007203 ORTHO05D020137 2.7e-14 84.3 116 52.6
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 4.6e-14 83.6 58 77.6
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 4.6e-14 83.6 58 77.6
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 6.0e-14 83.2 138 43.5
BcaB03g12495 Brassica carinata HOM05D007203 ORTHO05D020127 1.0e-13 82.4 49 83.7
A01p36010 Brassica napus HOM05D007203 ORTHO05D011558 2.3e-13 81.3 41 95.1
BolC9t57648H Brassica oleracea HOM05D007203 ORTHO05D011558 2.3e-13 81.3 41 95.1
BolC6t36235H Brassica oleracea HOM05D007203 ORTHO05D011558 5.1e-13 80.1 41 92.7
BcaC03g15868 Brassica carinata HOM05D007203 ORTHO05D008395 8.7e-13 79.3 61 77.0
A02p26600 Brassica napus HOM05D007203 ORTHO05D020127 1.5e-12 78.6 66 68.2
BcaC04g20469 Brassica carinata HOM05D007203 ORTHO05D014981 2.5e-12 77.8 80 62.5
BolC5t32923H Brassica oleracea HOM05D007203 ORTHO05D011558 2.5e-12 77.8 41 92.7
BcaB02g11369 Brassica carinata HOM05D007203 ORTHO05D094245 4.3e-12 77.0 82 64.6
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 4.3e-12 77.0 136 44.1
C04p49980 Brassica napus HOM05D007203 ORTHO05D027555 7.4e-12 76.3 109 48.6
BcaB01g03085 Brassica carinata HOM05D007203 ORTHO05D011558 9.6e-12 75.9 51 74.5
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 1.3e-11 75.5 95 53.7
C06p20840 Brassica napus HOM05D007203 ORTHO05D014981 1.3e-11 75.5 59 76.3
BolC5t32659H Brassica oleracea HOM05D007203 ORTHO05D014981 1.3e-11 75.5 61 73.8
BolC6t37271H Brassica oleracea HOM05D007203 ORTHO05D014981 1.3e-11 75.5 59 76.3
C06p32870 Brassica napus HOM05D007203 ORTHO05D102649 1.6e-11 75.1 110 51.8
BraA07t28681Z Brassica rapa HOM05D007203 ORTHO05D014981 1.6e-11 75.1 140 42.9
A07p08910 Brassica napus HOM05D007203 ORTHO05D014981 2.1e-11 74.7 59 76.3
C03p58910 Brassica napus HOM05D007203 ORTHO05D014981 3.7e-11 73.9 59 74.6
A08p11270 Brassica napus HOM05D007203 ORTHO05D014981 4.8e-11 73.6 59 74.6
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 4.8e-11 73.6 210 31.4
BraA08t33122Z Brassica rapa HOM05D007203 ORTHO05D014981 4.8e-11 73.6 59 74.6
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 6.2e-11 73.2 456 31.4
A08p11290 Brassica napus HOM05D007203 ORTHO05D014981 8.1e-11 72.8 61 70.5
BraA08t33125Z Brassica rapa HOM05D007203 ORTHO05D014981 8.1e-11 72.8 61 70.5
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 1.4e-10 72.0 76 56.6
Sp6g02630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.8e-10 71.6 124 37.1
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 3.1e-10 70.9 201 32.8
C01p15990 Brassica napus HOM05D007203 ORTHO05D011558 4.0e-10 70.5 42 81.0
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-09 68.9 98 43.9
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-09 68.6 356 28.4
C02p38520 Brassica napus HOM05D007203 ORTHO05D014981 1.5e-09 68.6 61 68.9
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 2.6e-09 67.8 94 45.7
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 3.4e-09 67.4 95 44.2
C04p18990 Brassica napus HOM05D002042 ORTHO05D003928 4.5e-09 67.0 77 54.5
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 5.8e-09 66.6 96 43.8
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 7.6e-09 66.2 91 45.1
C09p61810 Brassica napus HOM05D007203 ORTHO05D041948 7.6e-09 66.2 46 71.7
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 7.6e-09 66.2 95 43.2
BolC9t59019H Brassica oleracea HOM05D007203 ORTHO05D041948 7.6e-09 66.2 46 71.7
A09p64590 Brassica napus HOM05D008062 ORTHO05D011707 1.7e-08 65.1 147 34.7
C02p45980 Brassica napus HOM05D008062 ORTHO05D011707 1.7e-08 65.1 147 34.7
BraA02t06440Z Brassica rapa HOM05D008062 ORTHO05D011707 1.7e-08 65.1 147 34.7
BcaC04g20468 Brassica carinata HOM05D007203 ORTHO05D094473 2.2e-08 64.7 58 60.3
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 2.2e-08 64.7 201 34.8
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 2.9e-08 64.3 64 60.9
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 3.8e-08 63.9 83 50.6
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 4.9e-08 63.5 99 42.4
A04p05310 Brassica napus HOM05D008062 ORTHO05D097307 6.5e-08 63.2 150 35.3
C09p28920 Brassica napus HOM05D007203 ORTHO05D100065 8.4e-08 62.8 51 72.5
BraA01t00733Z Brassica rapa HOM05D008062 ORTHO05D011707 8.4e-08 62.8 145 33.8
C08p06790 Brassica napus HOM05D008062 ORTHO05D042315 1.1e-07 62.4 55 65.5
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 1.4e-07 62.0 79 51.9
BcaB04g19551 Brassica carinata HOM05D007203 ORTHO05D008395 1.9e-07 61.6 38 78.9
A06p00920 Brassica napus HOM05D008062 ORTHO05D011707 1.9e-07 61.6 150 34.7
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 1.9e-07 61.6 82 53.7
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 2.5e-07 61.2 81 53.1
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 3.2e-07 60.8 489 29.7
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 4.2e-07 60.5 90 46.7
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 7.1e-07 59.7 58 55.2
C08p21900 Brassica napus HOM05D007203 ORTHO05D020127 7.1e-07 59.7 66 62.1
BolC1t03732H Brassica oleracea HOM05D008062 ORTHO05D011707 7.1e-07 59.7 150 35.3
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 9.3e-07 59.3 63 57.1
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 9.3e-07 59.3 79 51.9
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 9.3e-07 59.3 58 55.2
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-06 58.5 58 55.2
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-06 58.2 40 72.5
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 2.1e-06 58.2 102 48.0
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 3.5e-06 57.4 58 53.4
BolC3t17978H Brassica oleracea HOM05D007203 ORTHO05D020127 3.5e-06 57.4 66 60.6
A01p28280 Brassica napus HOM05D004128 ORTHO05D017536 4.6e-06 57.0 62 62.9
BraA07t29497Z Brassica rapa HOM05D004128 ORTHO05D017536 4.6e-06 57.0 62 62.9
BraA08t33243Z Brassica rapa HOM05D004128 ORTHO05D017536 4.6e-06 57.0 62 62.9
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 7.9e-06 56.2 484 29.1
BolC8t47522H Brassica oleracea HOM05D008062 ORTHO05D042315 7.9e-06 56.2 55 61.8


User provided reference genes

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