Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g34437 Brassica carinata HOM05D000094 ORTHO05D001414 9.3e-43 176.4 85 100.0
C05p54520 Brassica napus HOM05D000094 ORTHO05D001414 2.5e-19 98.6 71 70.4
BolC5t34119H Brassica oleracea HOM05D000094 ORTHO05D001414 2.5e-19 98.6 71 70.4
A05p36150 Brassica napus HOM05D000094 ORTHO05D001414 1.2e-18 96.3 71 69.0
BraA05t22421Z Brassica rapa HOM05D000094 ORTHO05D001414 1.2e-18 96.3 71 69.0
Sp3g11570 Schrenkiella parvula HOM05D000094 ORTHO05D001414 2.7e-18 95.1 69 71.0
BcaB06g25459 Brassica carinata HOM05D000094 ORTHO05D001414 7.9e-18 93.6 69 71.0
Thhalv10019932m.g Eutrema salsugineum HOM05D000094 ORTHO05D001414 2.5e-16 88.6 70 68.6
AT3G13380 Arabidopsis thaliana HOM05D000094 ORTHO05D001414 7.4e-16 87.0 69 66.7
AL3G25230 Arabidopsis lyrata HOM05D000094 ORTHO05D001414 4.8e-15 84.3 69 68.1
CARHR087990 Cardamine hirsuta HOM05D000094 ORTHO05D001414 4.8e-15 84.3 77 58.4
Carub.0003s1275 Capsella rubella HOM05D000094 ORTHO05D001414 1.0e-12 76.6 69 62.3
BcaC09g48304 Brassica carinata HOM05D000094 ORTHO05D001414 1.3e-12 76.3 69 63.8
C01p51710 Brassica napus HOM05D000094 ORTHO05D001414 1.3e-12 76.3 69 63.8
BolC1t05116H Brassica oleracea HOM05D000094 ORTHO05D001414 1.3e-12 76.3 69 63.8
Thhalv10011192m.g Eutrema salsugineum HOM05D000094 ORTHO05D001414 1.8e-09 65.9 65 53.8
Aa31LG8G590 Aethionema arabicum HOM05D000094 ORTHO05D001414 2.5e-08 62.0 69 50.7
CARHR045310 Cardamine hirsuta HOM05D000094 ORTHO05D001414 2.5e-08 62.0 69 50.7
Sp1g41230 Schrenkiella parvula HOM05D000094 ORTHO05D001414 2.5e-08 62.0 65 50.8
THA.LOC104815676 Tarenaya hassleriana HOM05D000094 ORTHO05D001414 2.5e-08 62.0 69 52.2
AL1G63680 Arabidopsis lyrata HOM05D000094 ORTHO05D001414 3.3e-08 61.6 65 50.8
BcaC05g29184 Brassica carinata HOM05D000094 ORTHO05D001414 5.7e-08 60.8 46 67.4
AT1G55610 Arabidopsis thaliana HOM05D000094 ORTHO05D001414 7.4e-08 60.5 64 50.0
Carub.0001s4413 Capsella rubella HOM05D000094 ORTHO05D001414 2.2e-07 58.9 64 51.6


User provided reference genes

Program Settings