Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 2.1e-57 225.3 101 100.0
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 8.1e-54 213.4 101 92.1
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 4.0e-53 211.1 101 89.1
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 5.3e-53 210.7 101 89.1
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 9.0e-53 209.9 101 94.1
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 1.2e-52 209.5 102 91.2
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 4.5e-52 207.6 102 90.2
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 7.6e-52 206.8 101 93.1
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 7.6e-52 206.8 101 93.1
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 1.3e-51 206.1 101 94.1
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 2.4e-50 201.8 104 87.5
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 1.3e-48 196.1 109 81.7
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 3.7e-46 188.0 104 79.8
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 2.1e-41 172.2 105 71.4
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 1.0e-40 169.9 108 69.4
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 1.0e-40 169.9 112 67.0
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 2.3e-40 168.7 106 68.9
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 6.7e-40 167.2 101 72.3
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 8.7e-40 166.8 108 68.5
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 8.7e-40 166.8 97 74.2
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 8.7e-40 166.8 106 67.9
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.5e-39 166.0 110 65.5
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 1.9e-39 165.6 110 65.5
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 1.9e-39 165.6 110 68.2
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 1.9e-39 165.6 113 66.4
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 1.9e-39 165.6 110 68.2
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 2.5e-39 165.2 107 67.3
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 2.5e-39 165.2 110 67.3
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 2.5e-39 165.2 112 64.3
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 3.3e-39 164.9 109 67.9
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 3.3e-39 164.9 114 63.2
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 3.3e-39 164.9 112 65.2
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 3.3e-39 164.9 108 66.7
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 4.3e-39 164.5 112 65.2
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 7.4e-39 163.7 109 65.1
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 7.4e-39 163.7 109 67.0
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 9.6e-39 163.3 117 60.7
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 1.6e-38 162.5 113 62.8
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 2.1e-38 162.2 109 67.0
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 2.8e-38 161.8 111 64.0
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 3.7e-38 161.4 106 64.2
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 4.8e-38 161.0 111 65.8
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 4.8e-38 161.0 105 70.5
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 8.2e-38 160.2 105 69.5
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 1.1e-37 159.8 109 66.1
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 1.1e-37 159.8 110 63.6
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 3.1e-37 158.3 110 67.3
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 4.1e-37 157.9 114 65.8
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 5.3e-37 157.5 119 58.0
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 5.3e-37 157.5 118 57.6
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 9.0e-37 156.8 107 63.6
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.2e-36 156.4 112 61.6
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 1.2e-36 156.4 112 62.5
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 1.5e-36 156.0 109 64.2
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 1.5e-36 156.0 105 64.8
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 2.6e-36 155.2 110 63.6
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 3.4e-36 154.8 115 58.3
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 4.5e-36 154.5 111 62.2
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 7.6e-36 153.7 102 68.6
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 2.9e-35 151.8 103 63.1
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 2.9e-35 151.8 101 66.3
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 2.9e-35 151.8 111 61.3
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 3.8e-35 151.4 102 63.7
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 3.8e-35 151.4 102 67.6
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 5.0e-35 151.0 112 59.8
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 6.5e-35 150.6 119 56.3
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 6.5e-35 150.6 112 59.8
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 1.9e-34 149.1 108 63.0
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.5e-34 148.7 111 58.6
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 3.2e-34 148.3 105 64.8
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 3.2e-34 148.3 110 60.0
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 9.3e-34 146.7 114 57.0
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 2.1e-33 145.6 115 60.0
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 6.1e-33 144.1 114 56.1
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.8e-32 142.5 110 60.9
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.8e-32 142.5 110 60.9
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 2.3e-32 142.1 107 59.8
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 6.7e-32 140.6 119 52.1
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 1.9e-31 139.0 98 62.2
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 7.4e-31 137.1 111 57.7
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 1.3e-30 136.3 99 62.6
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 3.1e-29 131.7 94 63.8
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 2.6e-28 128.6 96 58.3
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 4.5e-28 127.9 100 54.0
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 2.2e-27 125.6 113 54.9
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 2.9e-27 125.2 105 52.4
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 1.4e-21 106.3 121 42.1
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 8.5e-19 97.1 73 57.5
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 8.5e-19 97.1 120 39.2
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.3e-14 83.2 71 52.1
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 2.2e-14 82.4 101 45.5
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 1.3e-11 73.2 67 49.3
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 1.9e-10 69.3 68 45.6
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.5e-10 68.9 35 74.3
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.0e-08 63.5 42 69.0


User provided reference genes

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