Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 4.3e-115 417.9 199 100.0
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 4.9e-103 377.9 199 90.5
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 2.5e-99 365.5 199 88.4
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 5.6e-99 364.4 199 88.4
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.4e-97 359.8 199 85.4
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.4e-97 359.8 199 85.4
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 6.2e-90 334.3 199 82.4
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 1.4e-86 323.2 199 78.9
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 3.5e-85 318.5 199 76.9
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 8.7e-84 313.9 200 75.0
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 4.0e-81 305.1 200 75.5
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 9.0e-81 303.9 201 75.6
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 6.1e-69 264.6 191 69.1
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 1.7e-58 229.9 196 59.7
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.6e-40 170.2 200 49.5
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 4.5e-40 168.7 200 48.0
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 5.9e-40 168.3 200 49.0
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 2.5e-38 162.9 203 45.3
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 9.4e-38 161.0 191 47.6
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 4.7e-37 158.7 191 48.7
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 4.7e-37 158.7 191 48.7
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 6.8e-36 154.8 198 42.4
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 8.8e-36 154.5 199 45.2
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 8.8e-36 154.5 196 45.4
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 1.2e-35 154.1 163 50.3
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 9.8e-35 151.0 193 44.0
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 9.8e-35 151.0 203 43.3
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 8.3e-34 147.9 187 43.9
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 8.3e-34 147.9 188 43.6
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 1.8e-33 146.7 199 43.2
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 4.1e-33 145.6 203 42.9
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 4.1e-33 145.6 188 43.6
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.0e-31 141.0 195 43.1
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 1.0e-31 141.0 203 42.4
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 3.8e-31 139.0 191 41.9
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 5.0e-31 138.7 196 42.3
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 1.5e-30 137.1 193 39.9
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 3.2e-30 136.0 191 44.0
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 3.2e-30 136.0 195 39.0
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 4.2e-30 135.6 197 42.1
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 9.5e-30 134.4 199 41.7
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 9.5e-30 134.4 190 43.7
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 1.2e-29 134.0 205 39.0
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.6e-29 133.7 204 41.2
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.6e-29 133.7 200 43.0
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 2.1e-29 133.3 190 42.1
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 2.1e-29 133.3 203 41.4
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 3.6e-29 132.5 200 42.0
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 4.7e-29 132.1 197 41.1
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 4.7e-29 132.1 198 39.4
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 6.1e-29 131.7 190 39.5
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 1.8e-28 130.2 192 40.6
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 4.0e-28 129.0 194 38.1
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 5.2e-28 128.6 195 40.5
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 5.2e-28 128.6 204 38.7
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 8.8e-28 127.9 201 38.3
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 1.5e-27 127.1 207 38.6
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 2.6e-27 126.3 195 40.0
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 2.6e-27 126.3 192 40.6
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 4.4e-27 125.6 196 40.8
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 5.7e-27 125.2 188 42.6
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.7e-26 123.6 196 39.3
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 2.2e-26 123.2 191 38.2
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 2.2e-26 123.2 202 42.6
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 4.9e-26 122.1 204 38.2
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.2e-24 117.5 195 40.0
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 1.6e-24 117.1 200 36.0
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 2.0e-24 116.7 206 38.3
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 2.7e-24 116.3 196 39.8
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 2.7e-24 116.3 196 39.8
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 3.5e-24 115.9 195 38.5
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 5.9e-24 115.2 195 35.9
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 1.0e-23 114.4 187 40.6
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 1.0e-23 114.4 197 38.1
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 1.3e-23 114.0 195 39.5
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 1.7e-23 113.6 194 39.2
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 2.9e-23 112.8 193 38.3
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 1.1e-22 110.9 185 37.3
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 1.5e-22 110.5 186 38.2
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 4.3e-22 109.0 113 48.7
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 4.3e-22 109.0 193 35.8
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 5.6e-22 108.6 198 33.8
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 9.5e-22 107.8 194 36.1
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 2.1e-21 106.7 178 41.0
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 3.6e-21 105.9 197 36.5
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 3.6e-21 105.9 103 53.4
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 4.7e-21 105.5 189 41.3
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 8.0e-21 104.8 202 35.6
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 1.0e-20 104.4 198 34.8
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 1.4e-20 104.0 190 37.4
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 3.0e-20 102.8 180 38.9
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 3.0e-20 102.8 192 36.5
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 4.0e-20 102.4 195 34.9
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 8.9e-20 101.3 197 36.5
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 1.2e-19 100.9 182 36.3
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 2.0e-19 100.1 199 34.7
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 2.6e-19 99.8 189 34.9
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 5.7e-19 98.6 202 35.1
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 9.8e-19 97.8 183 38.8
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 1.3e-18 97.4 209 34.4
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 1.7e-18 97.1 194 34.5
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 2.2e-18 96.7 197 34.5
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 2.9e-18 96.3 196 35.7
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 2.9e-18 96.3 204 35.3
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 3.7e-18 95.9 157 39.5
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 1.6e-16 90.5 198 34.8
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 3.5e-16 89.4 182 35.2
BolC8t47476H Brassica oleracea HOM05D006157 ORTHO05D007826 1.0e-15 87.8 74 64.9
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 1.7e-15 87.0 193 33.2
C08p06300 Brassica napus HOM05D006157 ORTHO05D007826 2.3e-15 86.7 74 63.5
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 1.9e-14 83.6 183 32.2
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 1.9e-14 83.6 183 32.2
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 4.7e-13 79.0 163 36.2
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.4e-12 77.4 95 46.3
BolC6t35322H Brassica oleracea HOM05D006157 ORTHO05D007826 6.8e-12 75.1 34 97.1
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 7.5e-11 71.6 141 37.6
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 4.9e-10 68.9 191 29.3
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 3.2e-09 66.2 149 28.9
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 1.2e-08 64.3 77 37.7
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 1.0e-07 61.2 77 37.7
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 1.0e-07 61.2 189 30.2
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 7.3e-06 55.1 48 54.2


User provided reference genes

Program Settings