Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33764 Brassica carinata HOM05D004817 ORTHO05D005790 2.4e-37 158.3 78 100.0
A05p21090 Brassica napus HOM05D004817 ORTHO05D005790 7.0e-37 156.8 78 98.7
BolC5t32277H Brassica oleracea HOM05D004817 ORTHO05D005790 7.0e-37 156.8 78 98.7
BraA05t21012Z Brassica rapa HOM05D004817 ORTHO05D005790 7.0e-37 156.8 78 98.7
BraA06t23656Z Brassica rapa HOM05D004817 ORTHO05D005790 1.2e-36 156.0 78 98.7
BcaC07g37143 Brassica carinata HOM05D004817 ORTHO05D005790 2.0e-36 155.2 78 98.7
A08p04790 Brassica napus HOM05D004817 ORTHO05D005790 2.0e-36 155.2 78 98.7
BraA08t32509Z Brassica rapa HOM05D004817 ORTHO05D005790 2.0e-36 155.2 78 98.7
Thhalv10011909m.g Eutrema salsugineum HOM05D004817 ORTHO05D005790 2.6e-36 154.8 78 97.4
BcaC08g43030 Brassica carinata HOM05D004817 ORTHO05D005790 4.5e-36 154.1 76 97.4
C06p02830 Brassica napus HOM05D004817 ORTHO05D005790 4.5e-36 154.1 76 97.4
BolC6t35412H Brassica oleracea HOM05D004817 ORTHO05D005790 4.5e-36 154.1 76 97.4
Sp1g35290 Schrenkiella parvula HOM05D004817 ORTHO05D005790 1.0e-35 152.9 78 97.4
BcaC05g27577 Brassica carinata HOM05D004817 ORTHO05D005790 1.3e-35 152.5 78 96.2
C05p35610 Brassica napus HOM05D004817 ORTHO05D005790 1.3e-35 152.5 78 96.2
CARHR037950 Cardamine hirsuta HOM05D004817 ORTHO05D005790 1.7e-35 152.1 78 96.2
AL1G54940 Arabidopsis lyrata HOM05D004817 ORTHO05D005790 2.9e-35 151.4 78 94.9
C08p05160 Brassica napus HOM05D004817 ORTHO05D005790 2.9e-35 151.4 76 97.4
BcaB04g17438 Brassica carinata HOM05D004817 ORTHO05D005790 3.8e-35 151.0 78 96.2
AT1G48330 Arabidopsis thaliana HOM05D004817 ORTHO05D005790 8.0e-33 143.3 78 93.6
Carub.0001s3746 Capsella rubella HOM05D004817 ORTHO05D005790 5.2e-32 140.6 81 90.1
Aa31LG8G4450 Aethionema arabicum HOM05D004817 ORTHO05D005790 1.8e-29 132.1 85 80.0
BcaB06g25835 Brassica carinata HOM05D004817 ORTHO05D005790 5.9e-28 127.1 78 82.1
Thhalv10022414m.g Eutrema salsugineum HOM05D004817 ORTHO05D005790 1.0e-27 126.3 81 79.0
A05p32270 Brassica napus HOM05D004817 ORTHO05D005790 1.3e-27 125.9 81 79.0
BraA05t22056Z Brassica rapa HOM05D004817 ORTHO05D005790 1.3e-27 125.9 81 79.0
Aa31LG10G5430 Aethionema arabicum HOM05D004817 ORTHO05D005790 1.7e-27 125.6 81 80.2
A03p40250 Brassica napus HOM05D004817 ORTHO05D005790 2.2e-27 125.2 82 79.3
AL3G30650 Arabidopsis lyrata HOM05D004817 ORTHO05D005790 2.9e-27 124.8 79 79.7
AT3G17580 Arabidopsis thaliana HOM05D004817 ORTHO05D005790 2.9e-27 124.8 81 79.0
Carub.0003s1729 Capsella rubella HOM05D004817 ORTHO05D005790 2.9e-27 124.8 79 79.7
C05p48800 Brassica napus HOM05D004817 ORTHO05D005790 3.8e-27 124.4 81 77.8
BolC5t33617H Brassica oleracea HOM05D004817 ORTHO05D005790 3.8e-27 124.4 81 77.8
BcaB04g18952 Brassica carinata HOM05D004817 ORTHO05D005790 5.0e-27 124.0 82 78.0
BcaC01g03751 Brassica carinata HOM05D004817 ORTHO05D005790 5.0e-27 124.0 82 78.0
BcaC05g28773 Brassica carinata HOM05D004817 ORTHO05D005790 5.0e-27 124.0 81 77.8
C03p48950 Brassica napus HOM05D004817 ORTHO05D005790 5.0e-27 124.0 82 78.0
BolC3t17174H Brassica oleracea HOM05D004817 ORTHO05D005790 5.0e-27 124.0 82 78.0
BraA03t13178Z Brassica rapa HOM05D004817 ORTHO05D005790 5.0e-27 124.0 82 78.0
BcaB04g20835 Brassica carinata HOM05D004817 ORTHO05D005790 6.5e-27 123.6 83 77.1
CARHR092890 Cardamine hirsuta HOM05D004817 ORTHO05D005790 6.5e-27 123.6 78 82.1
Sp3g15710 Schrenkiella parvula HOM05D004817 ORTHO05D005790 8.5e-27 123.2 82 76.8
A01p36770 Brassica napus HOM05D004817 ORTHO05D005790 1.9e-26 122.1 83 75.9
BraA01t03738Z Brassica rapa HOM05D004817 ORTHO05D005790 1.9e-26 122.1 83 75.9
BcaC09g48714 Brassica carinata HOM05D004817 ORTHO05D005790 3.2e-26 121.3 82 76.8
THA.LOC104821815 Tarenaya hassleriana HOM05D004817 ORTHO05D005790 5.9e-20 100.5 74 68.9
Sed0023994 Sechium edule HOM05D004817 ORTHO05D005790 1.0e-16 89.7 71 62.0
Solyc05g053180.3 Solanum lycopersicum HOM05D004817 ORTHO05D005790 1.0e-16 89.7 71 60.6
Sopen05g031690 Solanum pennellii HOM05D004817 ORTHO05D005790 1.0e-16 89.7 71 60.6
CAN.G305.33 Capsicum annuum HOM05D004817 ORTHO05D005790 1.4e-16 89.4 71 60.6
PGSC0003DMG400027147 Solanum tuberosum HOM05D004817 ORTHO05D005790 1.4e-16 89.4 71 60.6
TPR.G29237 Trifolium pratense HOM05D004817 ORTHO05D005790 2.3e-16 88.6 72 66.7
Phvul.003G124400 Phaseolus vulgaris HOM05D004817 ORTHO05D005790 6.8e-16 87.0 78 64.1
Glyma.13G117300 Glycine max HOM05D004817 ORTHO05D005790 1.5e-15 85.9 78 61.5
Glyma.15G185200 Glycine max HOM05D004817 ORTHO05D005790 1.5e-15 85.9 72 63.9
ClCG05G006950 Citrullus lanatus HOM05D004817 ORTHO05D005790 2.0e-15 85.5 72 58.3
Psat1g016600 Pisum sativum HOM05D004817 ORTHO05D005790 2.0e-15 85.5 78 62.8
arahy.Tifrunner.gnm1.ann1.E7NGHZ Arachis hypogaea HOM05D004817 ORTHO05D005790 2.6e-15 85.1 78 60.3
Glyma.09G077700 Glycine max HOM05D004817 ORTHO05D005790 2.6e-15 85.1 72 62.5
Manes.03G213500 Manihot esculenta HOM05D004817 ORTHO05D005790 3.4e-15 84.7 78 61.5
Nitab4.5_0001769g0110 Nicotiana tabacum HOM05D004817 ORTHO05D005790 3.4e-15 84.7 71 60.6
Phvul.009G221600 Phaseolus vulgaris HOM05D004817 ORTHO05D005790 3.4e-15 84.7 73 64.4
Glyma.17G042600 Glycine max HOM05D004817 ORTHO05D005790 4.4e-15 84.3 78 60.3
arahy.Tifrunner.gnm1.ann1.XTK2NM Arachis hypogaea HOM05D004817 ORTHO05D005790 7.5e-15 83.6 78 59.0
CANSAT25G3847 Cannabis sativa HOM05D004817 ORTHO05D005790 7.5e-15 83.6 75 57.3
Lalb_Chr12g0200501 Lupinus albus HOM05D004817 ORTHO05D005790 9.8e-15 83.2 78 57.7
Sabra10G0003400 Salix brachista HOM05D004817 ORTHO05D005790 9.8e-15 83.2 72 63.9
Lalb_Chr07g0181551 Lupinus albus HOM05D004817 ORTHO05D005790 1.3e-14 82.8 78 61.5
PGR004G2302 Punica granatum HOM05D004817 ORTHO05D005790 1.3e-14 82.8 71 54.9
Migut.J01631 Erythranthe guttata HOM05D004817 ORTHO05D005790 1.7e-14 82.4 73 54.8
Psat4g020640 Pisum sativum HOM05D004817 ORTHO05D005790 1.7e-14 82.4 74 56.8
Sed0022538 Sechium edule HOM05D004817 ORTHO05D005790 2.2e-14 82.0 72 55.6
Eucgr.B02200 Eucalyptus grandis HOM05D004817 ORTHO05D005790 2.9e-14 81.6 79 55.7
Gohir.D01G023700 Gossypium hirsutum HOM05D004817 ORTHO05D005790 2.9e-14 81.6 72 59.7
Gorai.002G032200 Gossypium raimondii HOM05D004817 ORTHO05D005790 2.9e-14 81.6 72 59.7
Gohir.A01G036400 Gossypium hirsutum HOM05D004817 ORTHO05D005790 3.7e-14 81.3 71 60.6
Atru.chr4.3187 Acer truncatum HOM05D004817 ORTHO05D005790 4.9e-14 80.9 73 57.5
PGR031G2777 Punica granatum HOM05D004817 ORTHO05D005790 4.9e-14 80.9 80 57.5
Lalb_Chr13g0299061 Lupinus albus HOM05D004817 ORTHO05D005790 6.3e-14 80.5 72 61.1
Medtr2g044940 Medicago truncatula HOM05D004817 ORTHO05D005790 6.3e-14 80.5 72 59.7
Nitab4.5_0000745g0110 Nicotiana tabacum HOM05D004817 ORTHO05D005790 6.3e-14 80.5 71 60.6
Potri.010G004000 Populus trichocarpa HOM05D004817 ORTHO05D005790 8.3e-14 80.1 72 56.9
QL06p014718 Quercus lobata HOM05D004817 ORTHO05D005790 8.3e-14 80.1 79 59.5
TPR.G12580 Trifolium pratense HOM05D004817 ORTHO05D005790 8.3e-14 80.1 72 56.9
Ca_02320_v3 Cicer arietinum L. HOM05D004817 ORTHO05D005790 1.1e-13 79.7 72 56.9
CsaV3_3G015620 Cucumis sativus L. HOM05D004817 ORTHO05D005790 1.1e-13 79.7 74 58.1
Lalb_Chr08g0232961 Lupinus albus HOM05D004817 ORTHO05D005790 1.1e-13 79.7 77 58.4
Medtr4g124250 Medicago truncatula HOM05D004817 ORTHO05D005790 1.1e-13 79.7 72 58.3
COL.COLO4_25048 Corchorus olitorius HOM05D004817 ORTHO05D005790 1.4e-13 79.3 69 60.9
Eucgr.H04140 Eucalyptus grandis HOM05D004817 ORTHO05D005790 1.4e-13 79.3 72 56.9
FAN12G2725 Fragaria x ananassa HOM05D004817 ORTHO05D005790 1.4e-13 79.3 79 57.0
Lalb_Chr23g0276121 Lupinus albus HOM05D004817 ORTHO05D005790 1.4e-13 79.3 77 57.1
Cc03_g00010 Coffea canephora HOM05D004817 ORTHO05D005790 1.8e-13 79.0 75 60.0
FvH4_4g21760 Fragaria vesca HOM05D004817 ORTHO05D005790 1.8e-13 79.0 72 58.3
FAN07G2633 Fragaria x ananassa HOM05D004817 ORTHO05D005790 1.8e-13 79.0 72 58.3
Cfa015752 Carpinus fangiana HOM05D004817 ORTHO05D005790 2.4e-13 78.6 79 54.4
Cpa.g.sc146.7 Carica papaya HOM05D004817 ORTHO05D005790 3.2e-13 78.2 79 53.2
Duzib151G1168 Durio zibethinus HOM05D004817 ORTHO05D005790 3.2e-13 78.2 71 57.7
RcHm_v2.0_Chr4g0427991 Rosa chinensis HOM05D004817 ORTHO05D005790 3.2e-13 78.2 72 56.9
Lj2g0017510 Lotus japonicus HOM05D004817 ORTHO05D005790 4.1e-13 77.8 77 53.2
Lj4g0003186 Lotus japonicus HOM05D004817 ORTHO05D005790 4.1e-13 77.8 77 53.2
Lj6g0012255 Lotus japonicus HOM05D004817 ORTHO05D005790 5.4e-13 77.4 72 59.7
CiPaw.01G127200 Carya illinoinensis HOM05D004817 ORTHO05D005790 7.0e-13 77.0 72 58.3
Oeu022716.1 Olea europaea HOM05D004817 ORTHO05D005790 7.0e-13 77.0 75 53.3
FAN17G1578 Fragaria x ananassa HOM05D004817 ORTHO05D005790 9.2e-13 76.6 72 56.9
Ciclev10007149m.g Citrus clementina HOM05D004817 ORTHO05D005790 1.6e-12 75.9 72 55.6
MD16G1133100 Malus domestica HOM05D004817 ORTHO05D005790 1.6e-12 75.9 72 56.9
EL10Ac3g06222 Beta vulgaris HOM05D004817 ORTHO05D005790 2.0e-12 75.5 77 54.5
arahy.Tifrunner.gnm1.ann1.WNQ9XL Arachis hypogaea HOM05D004817 ORTHO05D005790 4.6e-12 74.3 76 53.9
Dinv24730 Davidia involucrata HOM05D004817 ORTHO05D005790 4.6e-12 74.3 69 56.5
Aqoxy5G02845 Aquilegia oxysepala HOM05D004817 ORTHO05D005790 5.9e-12 73.9 72 50.0
SalBow6G6449 Salvia bowleyana HOM05D004817 ORTHO05D005790 5.9e-12 73.9 69 50.7
Hund12264 Selenicereus undatus HOM05D004817 ORTHO05D005790 5.9e-12 73.9 79 53.2
MD13G1137200 Malus domestica HOM05D004817 ORTHO05D005790 1.0e-11 73.2 72 56.9
Nn4g25286 Nelumbo nucifera HOM05D004817 ORTHO05D005790 1.0e-11 73.2 69 55.1
CANSAT78G0586 Cannabis sativa HOM05D004817 ORTHO05D005790 1.7e-11 72.4 82 50.0
DCAR_023420 Daucus carota HOM05D004817 ORTHO05D005790 1.7e-11 72.4 80 52.5
Lalb_Chr11g0073761 Lupinus albus HOM05D004817 ORTHO05D005790 2.3e-11 72.0 78 53.8
PSO761G0543 Papaver somniferum HOM05D004817 ORTHO05D005790 2.9e-11 71.6 69 53.6
arahy.Tifrunner.gnm1.ann1.V5CRDX Arachis hypogaea HOM05D004817 ORTHO05D005790 5.0e-11 70.9 78 51.3
Prupe.1G208000 Prunus persica HOM05D004817 ORTHO05D005790 5.0e-11 70.9 72 52.8
Thecc.04G314800 Theobroma cacao HOM05D004817 ORTHO05D005790 6.6e-11 70.5 72 52.8
DCAR_026926 Daucus carota HOM05D004817 ORTHO05D005790 1.1e-10 69.7 71 52.1
Oeu002212.1 Olea europaea HOM05D004817 ORTHO05D005790 4.3e-10 67.8 74 50.0
DCAR_030417 Daucus carota HOM05D004817 ORTHO05D005790 1.2e-09 66.2 83 45.8
PGSC0003DMG400004597 Solanum tuberosum HOM05D004817 ORTHO05D005790 1.2e-09 66.2 69 50.7
GSVIVG01017708001 Vitis vinifera HOM05D004817 ORTHO05D005790 1.2e-09 66.2 71 50.7
Peaxi162Scf00323g00924 Petunia axillaris HOM05D004817 ORTHO05D005790 1.6e-09 65.9 68 54.4
Solyc12g098880.2 Solanum lycopersicum HOM05D004817 ORTHO05D005790 2.1e-09 65.5 70 48.6
Sopen12g033630 Solanum pennellii HOM05D004817 ORTHO05D005790 2.8e-09 65.1 71 47.9
MBI18_g46513_MAGBIO Magnolia biondii HOM05D004817 ORTHO05D005790 3.6e-09 64.7 69 49.3
DCAR_002559 Daucus carota HOM05D004817 ORTHO05D005790 4.7e-09 64.3 78 42.3
Eucgr.H01515 Eucalyptus grandis HOM05D004817 ORTHO05D005790 6.2e-09 63.9 86 50.0
MBI18_g40079_MAGBIO Magnolia biondii HOM05D004817 ORTHO05D005790 6.2e-09 63.9 69 50.7
Aqoxy2G02458 Aquilegia oxysepala HOM05D004817 ORTHO05D005790 1.0e-08 63.2 71 49.3
TAR362G1300 Trochodendron aralioides HOM05D004817 ORTHO05D005790 1.4e-08 62.8 71 49.3
unitig_744.g24175 Utricularia gibba HOM05D004817 ORTHO05D005790 1.8e-08 62.4 71 49.3
unitig_746.g26894 Utricularia gibba HOM05D004817 ORTHO05D005790 1.8e-08 62.4 71 45.1
CDE02G4689 Ceratophyllum demersum HOM05D004817 ORTHO05D005790 1.5e-07 59.3 71 42.3
Haze_00750 Corylus avellana HOM05D004817 ORTHO05D005790 2.0e-07 58.9 59 52.5
Nitab4.5_0003998g0090 Nicotiana tabacum HOM05D004817 ORTHO05D005790 2.0e-07 58.9 74 47.3
Nitab4.5_0000978g0020 Nicotiana tabacum HOM05D004817 ORTHO05D005790 3.4e-07 58.2 74 47.3
Zm00001eb332330 Zea mays HOM05D004817 ORTHO05D005790 3.4e-07 58.2 78 43.6
CDE08G0719 Ceratophyllum demersum HOM05D004817 ORTHO05D005790 9.8e-07 56.6 69 42.0
Zm00001eb129600 Zea mays HOM05D004817 ORTHO05D005790 9.8e-07 56.6 89 39.3
unitig_21.g20684 Utricularia gibba HOM05D004817 ORTHO05D005790 1.7e-06 55.8 71 43.7
ATR0796G174 Amborella trichopoda HOM05D004817 ORTHO05D005790 6.4e-06 53.9 75 40.0


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