Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 2.1e-29 131.7 69 100.0
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 1.1e-28 129.4 68 98.5
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 1.1e-28 129.4 68 98.5
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 5.2e-28 127.1 68 97.1
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 8.9e-28 126.3 68 97.1
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 1.2e-27 125.9 68 95.6
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 1.3e-26 122.5 68 94.1
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 3.8e-26 120.9 68 91.2
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 1.2e-24 115.9 68 88.2
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 1.6e-24 115.5 68 88.2
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 3.5e-24 114.4 68 86.8
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 1.7e-23 112.1 68 89.7
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 8.1e-21 103.2 58 91.4
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 4.9e-18 94.0 68 70.6
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-17 92.8 68 70.6
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 1.9e-17 92.0 68 69.1
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 2.4e-17 91.7 68 69.1
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 2.4e-17 91.7 68 70.6
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 3.2e-17 91.3 68 69.1
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 4.2e-17 90.9 68 69.1
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 4.2e-17 90.9 68 69.1
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 4.2e-17 90.9 68 69.1
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 4.2e-17 90.9 68 69.1
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 5.4e-17 90.5 68 69.1
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 9.3e-17 89.7 68 69.1
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-16 89.4 68 67.6
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 1.6e-16 89.0 58 75.9
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 2.1e-16 88.6 68 67.6
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 2.7e-16 88.2 68 69.1
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 2.7e-16 88.2 67 68.7
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 3.5e-16 87.8 68 66.2
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 6.0e-16 87.0 62 72.6
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 7.8e-16 86.7 68 67.6
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 1.0e-15 86.3 58 75.9
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 1.0e-15 86.3 68 66.2
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 1.0e-15 86.3 58 75.9
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 1.0e-15 86.3 70 65.7
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 1.3e-15 85.9 64 67.2
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 1.7e-15 85.5 65 69.2
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 2.3e-15 85.1 68 66.2
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 2.3e-15 85.1 58 75.9
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 2.3e-15 85.1 62 69.4
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 2.3e-15 85.1 62 71.0
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 2.3e-15 85.1 70 64.3
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 2.3e-15 85.1 62 71.0
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 2.3e-15 85.1 67 65.7
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 2.3e-15 85.1 61 72.1
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 2.3e-15 85.1 70 64.3
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 3.0e-15 84.7 70 64.3
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 3.0e-15 84.7 70 64.3
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 3.0e-15 84.7 70 64.3
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 6.6e-15 83.6 64 68.8
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 8.7e-15 83.2 58 74.1
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 1.1e-14 82.8 58 72.4
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 1.9e-14 82.0 58 72.4
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 2.5e-14 81.6 62 67.7
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 2.5e-14 81.6 62 67.7
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 4.3e-14 80.9 70 61.4
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 5.6e-14 80.5 58 69.0
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 5.6e-14 80.5 70 60.0
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 5.6e-14 80.5 58 69.0
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 9.6e-14 79.7 58 72.4
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 2.1e-13 78.6 68 61.8
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 2.8e-13 78.2 58 70.7
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 2.8e-13 78.2 58 70.7
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 2.8e-13 78.2 58 70.7
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 3.6e-13 77.8 58 70.7
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 3.6e-13 77.8 67 61.2
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 4.8e-13 77.4 58 70.7
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 6.2e-13 77.0 68 60.3
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 6.2e-13 77.0 68 57.4
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 6.2e-13 77.0 68 58.8
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 6.2e-13 77.0 68 58.8
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 6.2e-13 77.0 68 58.8
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 6.2e-13 77.0 68 58.8
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 1.1e-12 76.3 68 60.3
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 1.8e-12 75.5 68 55.9
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 3.1e-12 74.7 69 62.3
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 3.1e-12 74.7 68 54.4
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 6.9e-12 73.6 68 55.9
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 9.0e-12 73.2 68 57.4
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 9.0e-12 73.2 69 62.3
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 9.0e-12 73.2 68 57.4
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 1.2e-11 72.8 68 57.4
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 1.5e-11 72.4 68 54.4
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 2.0e-11 72.0 68 54.4
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 3.4e-11 71.2 68 55.9
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 4.5e-11 70.9 68 52.9
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 4.5e-11 70.9 69 59.4
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 9.9e-11 69.7 69 59.4
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 9.9e-11 69.7 69 59.4
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 9.9e-11 69.7 68 52.9
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 2.2e-10 68.6 68 52.9
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 2.2e-10 68.6 67 58.2
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 4.9e-10 67.4 59 66.1
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 1.1e-09 66.2 58 58.6
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 1.1e-09 66.2 58 58.6
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 1.9e-09 65.5 58 60.3
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 2.1e-08 62.0 33 97.0
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 3.5e-08 61.2 68 48.5
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 3.5e-08 61.2 68 51.5
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 4.6e-08 60.8 66 50.0
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 4.6e-08 60.8 33 93.9
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 4.6e-08 60.8 65 61.5
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 1.8e-07 58.9 33 90.9
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 1.8e-07 58.9 65 52.3
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 2.3e-07 58.5 58 53.4
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 5.1e-07 57.4 50 64.0
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 1.9e-06 55.5 40 72.5
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 7.4e-06 53.5 33 84.8
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 9.6e-06 53.1 58 48.3


User provided reference genes

Program Settings