Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33753 Brassica carinata HOM05D002776 ORTHO05D011320 7.2e-223 776.9 393 100.0
BcaB07g33087 Brassica carinata HOM05D002776 ORTHO05D011320 7.7e-108 394.8 258 81.0
C02p52040 Brassica napus HOM05D002776 ORTHO05D000395 9.4e-106 387.9 258 78.3
BraA08t32835Z Brassica rapa HOM05D002776 ORTHO05D011320 3.2e-98 362.8 258 74.4
BcaB03g15955 Brassica carinata HOM05D002776 ORTHO05D011320 4.2e-98 362.5 237 77.6
BcaB05g23247 Brassica carinata HOM05D002776 ORTHO05D011320 5.7e-95 352.1 232 78.0
BcaB02g11313 Brassica carinata HOM05D002776 ORTHO05D000395 7.0e-93 345.1 215 83.3
C05p34920 Brassica napus HOM05D002776 ORTHO05D011320 1.0e-91 341.3 215 80.5
BcaB03g16296 Brassica carinata HOM05D002776 ORTHO05D000395 2.9e-91 339.7 216 81.9
BolC3t18858H Brassica oleracea HOM05D002776 ORTHO05D000395 8.5e-91 338.2 215 80.0
C06p18050 Brassica napus HOM05D002776 ORTHO05D000395 1.5e-90 337.4 215 80.0
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 1.5e-90 337.4 215 79.1
BolC6t36736H Brassica oleracea HOM05D002776 ORTHO05D011320 1.9e-90 337.0 215 79.5
C07p38490 Brassica napus HOM05D002776 ORTHO05D011320 2.5e-90 336.7 215 79.5
C04p41830 Brassica napus HOM05D002776 ORTHO05D000395 8.0e-89 331.6 215 78.6
C04p36700 Brassica napus HOM05D002776 ORTHO05D011320 1.8e-88 330.5 215 78.6
C03p44570 Brassica napus HOM05D002776 ORTHO05D011320 3.0e-88 329.7 215 78.1
A05p28380 Brassica napus HOM05D002776 ORTHO05D003044 1.2e-87 327.8 215 78.1
A01p20490 Brassica napus HOM05D002776 ORTHO05D000395 7.5e-87 325.1 215 77.7
A10p06580 Brassica napus HOM05D002776 ORTHO05D000395 1.2e-84 317.8 215 76.3
C04p56090 Brassica napus HOM05D002776 ORTHO05D003044 7.7e-84 315.1 222 74.3
C01p30580 Brassica napus HOM05D002776 ORTHO05D003044 5.0e-83 312.4 215 76.3
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 1.1e-82 311.2 215 75.8
C03p66380 Brassica napus HOM05D002776 ORTHO05D003044 4.2e-82 309.3 215 75.3
C02p53520 Brassica napus HOM05D002776 ORTHO05D003044 1.2e-81 307.8 215 75.3
A08p07570 Brassica napus HOM05D002776 ORTHO05D011320 1.0e-80 304.7 264 65.9
C01p48980 Brassica napus HOM05D002776 ORTHO05D003542 1.4e-80 304.3 215 74.0
BraA09t40150Z Brassica rapa HOM05D002776 ORTHO05D011320 1.8e-80 303.9 215 74.4
BcaB05g22944 Brassica carinata HOM05D002776 ORTHO05D000395 6.8e-80 302.0 220 74.5
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 1.2e-76 291.2 247 64.4
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 2.7e-76 290.0 215 71.6
A01p26310 Brassica napus HOM05D002776 ORTHO05D011320 1.9e-74 283.9 159 84.9
BcaC04g22429 Brassica carinata HOM05D002776 ORTHO05D011320 3.2e-74 283.1 215 70.2
A09p29650 Brassica napus HOM05D002776 ORTHO05D000395 3.2e-74 283.1 185 78.9
BraA09t38530Z Brassica rapa HOM05D002776 ORTHO05D000395 3.2e-74 283.1 185 78.9
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 1.4e-72 277.7 188 74.5
BcaB08g35015 Brassica carinata HOM05D002776 ORTHO05D011320 2.8e-70 270.0 204 71.1
BcaC08g44371 Brassica carinata HOM05D002776 ORTHO05D003044 1.4e-69 267.7 215 67.9
BcaB04g18118 Brassica carinata HOM05D002776 ORTHO05D000395 2.4e-69 266.9 269 60.6
BcaB06g26484 Brassica carinata HOM05D002776 ORTHO05D000395 1.2e-63 248.1 187 71.7
BcaC02g09778 Brassica carinata HOM05D002776 ORTHO05D011320 2.6e-63 246.9 136 86.8
BcaC08g44059 Brassica carinata HOM05D002776 ORTHO05D011320 2.4e-61 240.4 141 84.4
A03p65940 Brassica napus HOM05D002776 ORTHO05D003044 7.0e-61 238.8 136 84.6
BcaC05g26787 Brassica carinata HOM05D002776 ORTHO05D011320 1.6e-60 237.7 136 86.0
BcaC06g36448 Brassica carinata HOM05D002776 ORTHO05D003044 2.1e-57 227.3 216 58.8
BcaC07g39108 Brassica carinata HOM05D002776 ORTHO05D000395 1.4e-56 224.6 155 76.8
C03p65980 Brassica napus HOM05D002776 ORTHO05D003044 2.2e-54 217.2 136 79.4
BraA09t38884Z Brassica rapa HOM05D002776 ORTHO05D000395 4.6e-52 209.5 258 51.2
C05p44730 Brassica napus HOM05D002776 ORTHO05D000395 5.6e-50 202.6 215 55.8
BcaB05g23078 Brassica carinata HOM05D002776 ORTHO05D011320 8.9e-48 195.3 115 84.3
BcaC02g10286 Brassica carinata HOM05D002776 ORTHO05D011320 8.3e-46 188.7 136 70.6
BcaB06g26729 Brassica carinata HOM05D002776 ORTHO05D000395 1.4e-45 188.0 216 52.3
BcaC05g27518 Brassica carinata HOM05D002776 ORTHO05D000395 3.2e-45 186.8 167 59.3
BcaC06g36687 Brassica carinata HOM05D002776 ORTHO05D011320 1.3e-43 181.4 136 70.6
BcaB01g01630 Brassica carinata HOM05D002776 ORTHO05D011320 2.3e-43 180.6 190 57.9
BcaB06g27856 Brassica carinata HOM05D002776 ORTHO05D003044 1.5e-42 177.9 136 66.2
BcaC02g09112 Brassica carinata HOM05D002776 ORTHO05D011320 8.1e-41 172.2 136 64.7
BcaC06g33588 Brassica carinata HOM05D002776 ORTHO05D011320 8.9e-40 168.7 115 74.8
BraA08t32607Z Brassica rapa HOM05D002776 ORTHO05D000395 3.9e-35 153.3 112 75.0
C03p56210 Brassica napus HOM05D002776 ORTHO05D003044 9.6e-34 148.7 215 46.0
BcaC09g50108 Brassica carinata HOM05D002776 ORTHO05D011320 9.9e-31 138.7 79 84.8
BcaB06g27029 Brassica carinata HOM05D002776 ORTHO05D011320 5.4e-29 132.9 88 77.3
BcaB02g06428 Brassica carinata HOM05D002776 ORTHO05D011320 1.0e-27 128.6 70 88.6
BcaB01g04536 Brassica carinata HOM05D002776 ORTHO05D011320 5.6e-26 122.9 132 55.3
BraA01t03052Z Brassica rapa HOM05D002776 ORTHO05D000395 6.2e-25 119.4 81 72.8
C03p80440 Brassica napus HOM05D002776 ORTHO05D011320 1.5e-23 114.8 105 59.0
BolC5t32217H Brassica oleracea HOM05D002776 ORTHO05D011320 2.9e-22 110.5 56 89.3
BolC8t49070H Brassica oleracea HOM05D002776 ORTHO05D011320 2.9e-22 110.5 56 89.3
C09p16540 Brassica napus HOM05D002776 ORTHO05D011320 8.4e-22 109.0 56 87.5
BolC3t18911H Brassica oleracea HOM05D002776 ORTHO05D003044 1.1e-21 108.6 56 87.5
C09p27490 Brassica napus HOM05D002776 ORTHO05D003044 1.4e-21 108.2 56 87.5
C09p19460 Brassica napus HOM05D002776 ORTHO05D003044 1.9e-21 107.8 59 83.1
BraA07t28346Z Brassica rapa HOM05D002776 ORTHO05D000395 4.2e-21 106.7 56 87.5
A03p54420 Brassica napus HOM05D002776 ORTHO05D003044 9.3e-21 105.5 57 84.2
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 1.6e-20 104.8 55 87.3
BcaB04g17428 Brassica carinata HOM05D002776 ORTHO05D091936 5.1e-19 99.8 103 50.5
BcaC05g25875 Brassica carinata HOM05D002776 ORTHO05D011320 1.5e-18 98.2 51 90.2
A08p06070 Brassica napus HOM05D002776 ORTHO05D011320 4.8e-17 93.2 126 45.2
C01p34330 Brassica napus HOM05D001224 ORTHO05D023838 2.6e-15 87.4 88 50.0
BolC1t03403H Brassica oleracea HOM05D001224 ORTHO05D023838 2.6e-15 87.4 88 50.0
C03p65970 Brassica napus HOM05D002776 ORTHO05D000395 1.8e-11 74.7 66 65.2
C01p44950 Brassica napus HOM05D002776 ORTHO05D000395 3.0e-11 73.9 66 63.6
A01p28520 Brassica napus HOM05D002776 ORTHO05D000395 8.2e-09 65.9 82 53.7
C03p75850 Brassica napus HOM05D002776 ORTHO05D000395 1.5e-07 61.6 70 54.3
C09p28510 Brassica napus HOM05D002776 ORTHO05D000395 1.5e-07 61.6 31 87.1
AL8G20830 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 2.9e-06 57.4 100 40.0
BolC4t23819H Brassica oleracea HOM05D002776 ORTHO05D000395 2.9e-06 57.4 213 27.2
BcaB05g23549 Brassica carinata HOM05D002776 ORTHO05D091522 3.8e-06 57.0 42 57.1


User provided reference genes

Program Settings