Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 2.8e-180 635.2 325 100.0
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 1.3e-177 626.3 324 98.5
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 1.3e-177 626.3 324 98.5
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 3.2e-176 621.7 330 97.0
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 1.6e-175 619.4 324 97.5
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 2.1e-175 619.0 326 97.9
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 6.6e-174 614.0 325 96.0
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 3.3e-173 611.7 324 95.7
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 2.4e-171 605.5 324 94.4
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 5.8e-170 600.9 324 94.1
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 1.3e-169 599.7 322 94.7
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 2.2e-161 572.4 325 88.6
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 5.7e-149 531.2 319 83.7
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 1.4e-136 490.0 318 74.2
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 4.4e-133 478.4 317 74.1
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 7.4e-133 477.6 325 72.3
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 7.4e-133 477.6 316 73.7
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 2.2e-132 476.1 316 72.8
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 3.1e-131 472.2 319 73.7
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 7.0e-131 471.1 317 71.0
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 7.0e-131 471.1 317 71.0
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 9.1e-131 470.7 316 71.5
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 2.6e-130 469.2 316 74.1
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 3.5e-130 468.8 317 70.7
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 5.9e-130 468.0 318 70.4
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 1.0e-129 467.2 316 71.8
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 1.7e-129 466.5 316 71.2
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 2.9e-129 465.7 316 72.8
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 6.5e-129 464.5 316 73.1
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 8.5e-129 464.2 316 73.4
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 5.5e-128 461.5 316 71.5
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 7.2e-128 461.1 318 71.7
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 7.2e-128 461.1 316 71.5
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 1.2e-127 460.3 315 71.7
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 2.1e-127 459.5 313 70.0
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 8.0e-127 457.6 315 72.7
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 2.3e-126 456.1 315 69.5
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 3.0e-126 455.7 316 70.6
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 1.1e-125 453.8 319 71.8
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 1.5e-125 453.4 315 72.1
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 4.4e-125 451.8 320 69.4
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 9.7e-125 450.7 316 68.4
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 4.8e-124 448.4 316 70.6
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 2.4e-123 446.0 316 70.9
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 2.4e-123 446.0 317 68.5
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 4.1e-123 445.3 318 68.6
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 7.0e-123 444.5 315 70.2
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 1.2e-122 443.7 316 67.1
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.6e-122 443.4 316 68.7
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 3.5e-122 442.2 316 69.9
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 5.9e-122 441.4 315 68.3
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 2.2e-121 439.5 303 71.9
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 4.2e-120 435.3 315 67.6
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 7.2e-120 434.5 316 67.4
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 3.6e-119 432.2 314 68.8
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.0e-118 430.6 316 67.1
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.0e-118 430.6 305 67.9
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 1.4e-118 430.3 323 66.3
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 1.8e-118 429.9 302 69.9
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 1.8e-118 429.9 303 69.6
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 3.0e-118 429.1 316 67.4
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 5.2e-118 428.3 305 67.5
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 2.6e-117 426.0 337 63.8
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 4.4e-117 425.2 316 68.7
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.2e-116 422.9 296 69.6
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.8e-116 422.5 306 67.0
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 1.1e-115 420.6 319 64.6
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 4.1e-115 418.7 312 66.0
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 5.4e-115 418.3 359 60.4
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 5.4e-115 418.3 323 66.3
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 2.7e-114 416.0 308 66.2
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 4.5e-114 415.2 316 64.6
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 1.3e-113 413.7 271 74.5
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.5e-112 410.2 318 66.4
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 9.4e-112 407.5 302 66.9
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 1.8e-110 403.3 316 62.7
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 5.9e-106 388.3 316 63.0
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 5.9e-106 388.3 269 72.1
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 8.6e-105 384.4 316 63.0
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.5e-104 383.6 305 63.0
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 4.3e-104 382.1 202 93.1
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 1.2e-103 380.6 297 64.3
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.1e-99 367.5 337 58.2
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 2.0e-98 363.2 314 59.9
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 1.5e-96 357.1 313 60.4
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 1.9e-96 356.7 258 69.8
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 3.4e-93 345.9 270 65.9
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 3.4e-93 345.9 270 65.9
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 6.4e-92 341.7 246 66.7
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 3.5e-90 335.9 313 52.4
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 7.3e-88 328.2 232 67.7
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 1.6e-87 327.0 320 51.6
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 4.1e-83 312.4 256 62.9
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 2.5e-80 303.1 314 46.2
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.6e-79 300.4 314 45.2
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.8e-78 297.0 212 67.5
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 3.1e-78 296.2 316 50.0
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 5.1e-73 278.9 216 64.8
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 4.7e-71 272.3 180 72.8
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.0e-69 266.9 303 45.2
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 2.2e-68 263.5 232 57.3
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 1.1e-64 251.1 268 50.0
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 4.3e-64 249.2 330 45.8
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 3.3e-56 223.0 316 39.9
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 6.0e-50 202.2 145 67.6
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 4.6e-42 176.0 127 63.8
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 1.1e-40 171.4 129 62.8
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 3.7e-39 166.4 228 40.8
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 4.8e-31 139.4 247 36.0
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 2.0e-29 134.0 103 64.1
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.4e-22 111.3 93 57.0
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 4.1e-22 109.8 179 37.4
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 5.9e-21 105.9 87 59.8
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 2.9e-20 103.6 69 76.8
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.2e-07 60.8 70 47.1
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 7.0e-06 55.8 44 54.5


User provided reference genes

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