Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33682 Brassica carinata HOM05D009461 ORTHO05D002252 6.5e-41 170.2 83 100.0
BolC6t35534H Brassica oleracea HOM05D009461 ORTHO05D002252 2.3e-38 161.8 83 97.6
BcaC08g43126 Brassica carinata HOM05D009461 ORTHO05D002252 1.1e-37 159.5 83 96.4
C06p04010 Brassica napus HOM05D009461 ORTHO05D002252 1.1e-37 159.5 83 96.4
A06p03910 Brassica napus HOM05D009461 ORTHO05D002252 1.5e-37 159.1 83 96.4
BraA06t23599Z Brassica rapa HOM05D009461 ORTHO05D002252 1.5e-37 159.1 83 96.4
Thhalv10011902m.g Eutrema salsugineum HOM05D009461 ORTHO05D002252 5.7e-37 157.1 83 91.6
BcaC06g36704 Brassica carinata HOM05D009461 ORTHO05D002252 6.3e-36 153.7 83 89.2
C07p00920 Brassica napus HOM05D009461 ORTHO05D002252 6.3e-36 153.7 83 89.2
BolC7t40528H Brassica oleracea HOM05D009461 ORTHO05D002252 6.3e-36 153.7 83 89.2
A07p00480 Brassica napus HOM05D009461 ORTHO05D002252 8.2e-36 153.3 83 89.2
BraA07t27839Z Brassica rapa HOM05D009461 ORTHO05D002252 8.2e-36 153.3 83 89.2
Sp1g36190 Schrenkiella parvula HOM05D009461 ORTHO05D002252 1.5e-34 149.1 83 89.2
BcaC05g27512 Brassica carinata HOM05D009461 ORTHO05D002252 5.9e-34 147.1 83 88.0
C05p34820 Brassica napus HOM05D009461 ORTHO05D002252 5.9e-34 147.1 83 88.0
C05p34800 Brassica napus HOM05D009461 ORTHO05D002252 2.9e-33 144.8 83 86.7
AL1G56180 Arabidopsis lyrata HOM05D009461 ORTHO05D002252 5.0e-33 144.1 81 84.0
AL1G56260 Arabidopsis lyrata HOM05D009461 ORTHO05D002252 1.1e-32 142.9 81 84.0
BcaB04g17352 Brassica carinata HOM05D009461 ORTHO05D002252 1.6e-31 139.0 83 81.9
Carub.0001s3848 Capsella rubella HOM05D009461 ORTHO05D002252 1.6e-31 139.0 82 81.7
CARHR039300 Cardamine hirsuta HOM05D009461 ORTHO05D002252 1.6e-31 139.0 77 84.4
AT1G49310 Arabidopsis thaliana HOM05D009461 ORTHO05D002252 1.0e-30 136.3 78 83.3
A08p04090 Brassica napus HOM05D009461 ORTHO05D002252 1.1e-29 132.9 83 78.3
BraA08t32434Z Brassica rapa HOM05D009461 ORTHO05D002252 1.1e-29 132.9 83 78.3
C08p04280 Brassica napus HOM05D009461 ORTHO05D002252 4.4e-29 131.0 83 77.1
BolC8t47231H Brassica oleracea HOM05D009461 ORTHO05D002252 4.4e-29 131.0 83 77.1
BcaC07g37067 Brassica carinata HOM05D009461 ORTHO05D002252 5.7e-29 130.6 83 77.1
Carub.0001s3849 Capsella rubella HOM05D009461 ORTHO05D002252 2.8e-28 128.3 84 72.6
Aa31LG10G4650 Aethionema arabicum HOM05D009461 ORTHO05D002252 1.4e-19 99.4 58 74.1
THA.LOC104821866 Tarenaya hassleriana HOM05D009461 ORTHO05D002252 1.5e-16 89.4 83 55.4
Sabra04G0101600 Salix brachista HOM05D007227 ORTHO05D002252 1.7e-09 65.9 69 53.6
TWI31G0501 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 2.2e-09 65.5 76 47.4
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 1.9e-08 62.4 74 43.2
Gohir.D01G169400 Gossypium hirsutum HOM05D007227 ORTHO05D002252 2.5e-08 62.0 74 43.2
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 7.2e-08 60.5 85 42.4
Gohir.A01G178500 Gossypium hirsutum HOM05D007227 ORTHO05D002252 7.2e-08 60.5 74 41.9
TPR.G38124 Trifolium pratense HOM05D007227 ORTHO05D002252 7.2e-08 60.5 69 46.4
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 9.4e-08 60.1 84 41.7
arahy.Tifrunner.gnm1.ann1.BHH580 Arachis hypogaea HOM05D007227 ORTHO05D002252 1.2e-07 59.7 79 41.8
Lalb_Chr23g0265441 Lupinus albus HOM05D007227 ORTHO05D002252 1.2e-07 59.7 74 44.6
arahy.Tifrunner.gnm1.ann1.9WD8WJ Arachis hypogaea HOM05D007227 ORTHO05D002252 1.6e-07 59.3 80 43.8
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 1.6e-07 59.3 77 45.5
LjContig00272g0019714 Lotus japonicus HOM05D007227 ORTHO05D002252 2.1e-07 58.9 72 44.4
PGR142G1531 Punica granatum HOM05D007227 ORTHO05D002252 2.1e-07 58.9 67 43.3
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 4.7e-07 57.8 72 38.9
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 4.7e-07 57.8 74 43.2
CSS0037950 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 6.1e-07 57.4 81 39.5
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 6.1e-07 57.4 87 41.4
Sed0019925 Sechium edule HOM05D007227 ORTHO05D002252 6.1e-07 57.4 84 41.7
Medtr4g069770 Medicago truncatula HOM05D007227 ORTHO05D002252 8.0e-07 57.0 73 43.8
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 8.0e-07 57.0 73 43.8
Potri.009G114400 Populus trichocarpa HOM05D007227 ORTHO05D002252 8.0e-07 57.0 73 43.8
TWI75G0964 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 8.0e-07 57.0 72 48.6
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 1.0e-06 56.6 76 42.1
Potri.004G153200 Populus trichocarpa HOM05D007227 ORTHO05D002252 1.0e-06 56.6 69 46.4
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 1.4e-06 56.2 73 42.5
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 1.4e-06 56.2 87 40.2
Glyma.04G013400 Glycine max HOM05D007227 ORTHO05D002252 1.8e-06 55.8 73 41.1
Lj1g0025376 Lotus japonicus HOM05D007227 ORTHO05D002252 1.8e-06 55.8 74 41.9
CsaV3_2G014630 Cucumis sativus L. HOM05D007227 ORTHO05D002252 2.3e-06 55.5 79 43.0
Psat7g141720 Pisum sativum HOM05D007227 ORTHO05D002252 2.3e-06 55.5 74 40.5
HanXRQChr04g0127891 Helianthus annuus HOM05D007227 ORTHO05D002252 3.0e-06 55.1 71 39.4
Hund00277 Selenicereus undatus HOM05D013587 ORTHO05D002252 3.0e-06 55.1 74 40.5
VMungo1127G0518 Vigna mungo HOM05D007227 ORTHO05D002252 3.0e-06 55.1 73 41.1
Psat2g007160 Pisum sativum HOM05D007227 ORTHO05D002252 4.0e-06 54.7 69 40.6
Glyma.11G119200 Glycine max HOM05D007227 ORTHO05D002252 5.2e-06 54.3 73 43.8
ECA236G1258 Erigeron canadensis HOM05D007227 ORTHO05D002252 6.8e-06 53.9 71 40.8
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 6.8e-06 53.9 80 41.2
RcHm_v2.0_Chr6g0263881 Rosa chinensis HOM05D007227 ORTHO05D002252 6.8e-06 53.9 86 36.0
Sopen01g051670 Solanum pennellii HOM05D007227 ORTHO05D002252 8.8e-06 53.5 78 41.0


User provided reference genes

Program Settings