Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33664 Brassica carinata HOM05D008606 ORTHO05D011380 1.6e-67 259.2 126 100.0
BcaB07g33665 Brassica carinata HOM05D008606 ORTHO05D011380 3.4e-65 251.5 126 97.6
BcaB04g20136 Brassica carinata HOM05D008606 ORTHO05D011380 1.7e-64 249.2 126 96.8
BcaNung04519 Brassica carinata HOM05D008606 ORTHO05D011380 1.8e-63 245.7 126 95.2
BcaNung04520 Brassica carinata HOM05D008606 ORTHO05D011380 9.1e-63 243.4 126 93.7
BcaNung02938 Brassica carinata HOM05D008606 ORTHO05D011380 2.3e-42 175.6 89 96.6
BcaC05g27441 Brassica carinata HOM05D008606 ORTHO05D011380 4.9e-32 141.4 115 61.7
C05p33960 Brassica napus HOM05D008606 ORTHO05D011380 4.9e-32 141.4 115 61.7
BolC5t32130H Brassica oleracea HOM05D008606 ORTHO05D011380 4.9e-32 141.4 115 61.7
Thhalv10000528m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 1.4e-31 139.8 128 54.7
A05p20220 Brassica napus HOM05D008606 ORTHO05D011380 1.9e-31 139.4 115 60.9
BraA05t20932Z Brassica rapa HOM05D008606 ORTHO05D011380 1.9e-31 139.4 115 60.9
Thhalv10000689m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 2.7e-30 135.6 122 58.2
Thhalv10000711m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 1.0e-29 133.7 128 53.1
Carub.0008s1433 Capsella rubella HOM05D008606 ORTHO05D011380 1.3e-29 133.3 119 55.5
CARHR040260 Cardamine hirsuta HOM05D008606 ORTHO05D011380 1.7e-29 132.9 113 55.8
Thhalv10000541m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 1.7e-29 132.9 121 55.4
AT1G50220 Arabidopsis thaliana HOM05D008606 ORTHO05D011380 3.0e-29 132.1 113 58.4
AT1G43171 Arabidopsis thaliana HOM05D008606 ORTHO05D011380 2.5e-28 129.0 108 60.2
A06p03610 Brassica napus HOM05D008606 ORTHO05D011380 2.5e-28 129.0 115 55.7
A06p03350 Brassica napus HOM05D008606 ORTHO05D011380 5.6e-28 127.9 115 55.7
BraA06t23543Z Brassica rapa HOM05D008606 ORTHO05D011380 5.6e-28 127.9 115 55.7
BraA06t23567Z Brassica rapa HOM05D008606 ORTHO05D011380 5.6e-28 127.9 115 55.7
AL1G57810 Arabidopsis lyrata HOM05D000125 ORTHO05D000120 7.3e-28 127.5 113 56.6
BcaB02g11136 Brassica carinata HOM05D008606 ORTHO05D011380 7.3e-28 127.5 115 55.7
CARHR041480 Cardamine hirsuta HOM05D008606 ORTHO05D011380 1.2e-27 126.7 111 54.1
A06p08700 Brassica napus HOM05D008606 ORTHO05D011380 1.6e-27 126.3 115 54.8
BraA06t24067Z Brassica rapa HOM05D008606 ORTHO05D011380 1.6e-27 126.3 115 54.8
A09p20670 Brassica napus HOM05D008606 ORTHO05D011380 2.1e-27 125.9 115 53.9
BraA09t37671Z Brassica rapa HOM05D008606 ORTHO05D011380 2.1e-27 125.9 115 53.9
AT5G54067 Arabidopsis thaliana HOM05D008606 ORTHO05D011380 1.4e-26 123.2 119 53.8
AL8G29180 Arabidopsis lyrata HOM05D008606 ORTHO05D011380 4.9e-24 114.8 111 55.0
A06p03580 Brassica napus HOM05D008606 ORTHO05D011380 1.5e-17 93.2 81 55.6
Carub.0004s0094 Capsella rubella HOM05D008606 ORTHO05D014886 1.5e-17 93.2 116 41.4
AT2G21920 Arabidopsis thaliana HOM05D008606 ORTHO05D014886 2.6e-17 92.4 116 42.2
Carub.0004s0103 Capsella rubella HOM05D008606 ORTHO05D014886 2.2e-16 89.4 116 41.4
Carub.0004s0095 Capsella rubella HOM05D008606 ORTHO05D014886 8.4e-16 87.4 116 39.7
CARHR112950 Cardamine hirsuta HOM05D008606 ORTHO05D014886 8.4e-16 87.4 118 40.7
Thhalv10000701m.g Eutrema salsugineum HOM05D008606 ORTHO05D011380 1.2e-14 83.6 93 49.5
Carub.0004s0101 Capsella rubella HOM05D008606 ORTHO05D014886 1.6e-14 83.2 116 39.7
Carub.0006s2903 Capsella rubella HOM05D008606 ORTHO05D014886 3.5e-14 82.0 117 35.9
Carub.0006s2899 Capsella rubella HOM05D008606 ORTHO05D014886 2.5e-12 75.9 112 36.6
Carub.0240s0002 Capsella rubella HOM05D008606 ORTHO05D014886 2.5e-12 75.9 112 36.6
Carub.0006s2897 Capsella rubella HOM05D008606 ORTHO05D014886 5.6e-12 74.7 116 32.8
Carub.0008s0087 Capsella rubella HOM05D008606 ORTHO05D114305 1.5e-09 66.6 113 34.5
Thhalv10000608m.g Eutrema salsugineum HOM05D008606 ORTHO05D014886 2.6e-09 65.9 105 38.1
Carub.0006s2911 Capsella rubella HOM05D008606 ORTHO05D014886 3.2e-07 58.9 115 32.2
CARHR114090 Cardamine hirsuta HOM05D010833 ORTHO05D013211 3.2e-07 58.9 103 34.0
AT1G50190 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 9.3e-07 57.4 48 66.7
AT3G28853 Arabidopsis thaliana HOM05D011773 ORTHO05D013456 1.2e-06 57.0 106 33.0
C03p57890 Brassica napus HOM05D010833 ORTHO05D013211 6.0e-06 54.7 105 32.4
BolC3t18061H Brassica oleracea HOM05D010833 ORTHO05D013211 6.0e-06 54.7 105 32.4
Carub.0001s4092 Capsella rubella HOM05D011773 ORTHO05D013456 7.9e-06 54.3 103 36.9


User provided reference genes

Program Settings