Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33626 Brassica carinata HOM05D011499 ORTHO05D011963 5.2e-63 244.2 121 100.0
BcaNung00856 Brassica carinata HOM05D011499 ORTHO05D011963 2.4e-28 129.0 106 61.3
BcaC03g16152 Brassica carinata HOM05D011499 ORTHO05D011963 3.6e-24 115.2 110 57.3
BcaB04g17658 Brassica carinata HOM05D011499 ORTHO05D011963 6.2e-24 114.4 113 54.9
BcaC03g14231 Brassica carinata HOM05D011499 ORTHO05D011963 1.0e-23 113.6 110 56.4
BcaC08g43898 Brassica carinata HOM05D011499 ORTHO05D011963 3.1e-23 112.1 110 52.7
Thhalv10002194m.g Eutrema salsugineum HOM05D006735 ORTHO05D011963 6.8e-23 110.9 104 53.8
BcaB01g02453 Brassica carinata HOM05D011499 ORTHO05D011963 4.9e-21 104.8 113 51.3
BcaC04g22205 Brassica carinata HOM05D011499 ORTHO05D011963 9.2e-20 100.5 106 53.8
BcaB02g07232 Brassica carinata HOM05D011499 ORTHO05D011963 4.6e-19 98.2 110 52.7
BcaB05g23057 Brassica carinata HOM05D011499 ORTHO05D011963 6.6e-18 94.4 110 50.9
BcaC08g45874 Brassica carinata HOM05D011499 ORTHO05D011963 8.6e-18 94.0 102 54.9
BcaB02g10963 Brassica carinata HOM05D006735 ORTHO05D011963 4.0e-15 85.1 105 43.8
BcaB04g18785 Brassica carinata HOM05D006735 ORTHO05D011963 2.6e-14 82.4 105 41.9
BcaC09g49356 Brassica carinata HOM05D011499 ORTHO05D011963 2.6e-14 82.4 110 45.5
BraA06t25399Z Brassica rapa HOM05D006735 ORTHO05D009558 3.4e-14 82.0 109 42.2
AT2G20625 Arabidopsis thaliana HOM05D006735 ORTHO05D011963 9.8e-14 80.5 79 50.6
BcaB02g10644 Brassica carinata HOM05D006735 ORTHO05D011963 9.8e-14 80.5 105 41.9
C07p37620 Brassica napus HOM05D006735 ORTHO05D010262 9.8e-14 80.5 105 42.9
C09p55340 Brassica napus HOM05D006735 ORTHO05D009558 9.8e-14 80.5 105 42.9
BolC8t47857H Brassica oleracea HOM05D006735 ORTHO05D009558 3.7e-13 78.6 105 42.9
BolC8t50679H Brassica oleracea HOM05D006735 ORTHO05D009558 2.1e-11 72.8 102 42.2
BolC3t19829H Brassica oleracea HOM05D006735 ORTHO05D009558 3.5e-11 72.0 96 41.7
A09p18970 Brassica napus HOM05D006735 ORTHO05D009558 2.3e-10 69.3 105 40.0
BcaC04g18966 Brassica carinata HOM05D006735 ORTHO05D009558 6.6e-10 67.8 105 40.0
BcaC01g01277 Brassica carinata HOM05D006735 ORTHO05D009558 8.6e-10 67.4 105 40.0
C03p57400 Brassica napus HOM05D006735 ORTHO05D011963 1.9e-09 66.2 90 42.2
Carub.0003s1967 Capsella rubella HOM05D006735 ORTHO05D009558 1.9e-09 66.2 69 43.5
BolC8t49602H Brassica oleracea HOM05D006735 ORTHO05D009558 2.5e-09 65.9 96 38.5
BcaB01g03128 Brassica carinata HOM05D006735 ORTHO05D011963 1.2e-08 63.5 72 40.3
Sp5g35140 Schrenkiella parvula HOM05D006735 ORTHO05D009558 1.6e-08 63.2 59 44.1
AL2G40820 Arabidopsis lyrata HOM05D006735 ORTHO05D009558 2.1e-08 62.8 59 45.8
AL3G33240 Arabidopsis lyrata HOM05D006735 ORTHO05D009558 2.8e-08 62.4 63 44.4
AT3G19790 Arabidopsis thaliana HOM05D006735 ORTHO05D009558 2.8e-08 62.4 68 44.1
BcaB03g16748 Brassica carinata HOM05D006735 ORTHO05D011963 3.6e-08 62.0 90 35.6
BcaB01g02166 Brassica carinata HOM05D006735 ORTHO05D011963 4.7e-08 61.6 98 35.7
Thhalv10022056m.g Eutrema salsugineum HOM05D006735 ORTHO05D009558 8.1e-08 60.8 63 42.9
AT1G80625 Arabidopsis thaliana HOM05D006735 ORTHO05D009558 1.8e-07 59.7 59 44.1
BcaB05g22997 Brassica carinata HOM05D006735 ORTHO05D011963 1.8e-07 59.7 98 34.7
BcaB02g06784 Brassica carinata HOM05D006735 ORTHO05D011963 3.1e-07 58.9 98 34.7


User provided reference genes

Program Settings