Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33605 Brassica carinata HOM05D001371 ORTHO05D001319 0.0e+00 1368.6 714 100.0
AT1G50820 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 2.3e-41 174.9 469 34.1
AT1G50770 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 1.1e-38 166.0 485 34.8
Thhalv10012003m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 3.1e-38 164.5 426 35.7
AL1G58510 Arabidopsis lyrata HOM05D001371 ORTHO05D001319 4.4e-37 160.6 473 35.1
C06p06140 Brassica napus HOM05D001371 ORTHO05D001319 7.5e-37 159.8 433 36.7
BolC6t35725H Brassica oleracea HOM05D001371 ORTHO05D001319 2.3e-33 148.3 420 33.1
AT1G50745 Arabidopsis thaliana HOM05D001371 ORTHO05D019742 1.9e-32 145.2 260 43.1
C06p06110 Brassica napus HOM05D001371 ORTHO05D001319 1.5e-29 135.6 382 35.9
BolC6t35723H Brassica oleracea HOM05D001371 ORTHO05D001319 1.5e-29 135.6 382 35.9
AT1G50790 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 2.9e-28 131.3 464 31.9
C06p06120 Brassica napus HOM05D001371 ORTHO05D001319 3.6e-23 114.4 272 33.5
BraA06t23487Z Brassica rapa HOM05D001371 ORTHO05D001319 8.1e-23 113.2 281 34.2
BcaB07g33536 Brassica carinata HOM05D001371 ORTHO05D001319 1.1e-22 112.8 371 31.8
BcaC08g43267 Brassica carinata HOM05D001371 ORTHO05D019742 4.6e-18 97.4 224 36.6
A06p02800 Brassica napus HOM05D001371 ORTHO05D001319 5.1e-17 94.0 286 31.8
CARHR041470 Cardamine hirsuta HOM05D001371 ORTHO05D001319 3.3e-16 91.3 397 30.7
BcaC08g43266 Brassica carinata HOM05D001371 ORTHO05D001319 7.3e-16 90.1 294 32.0
CARHR040850 Cardamine hirsuta HOM05D001371 ORTHO05D001319 1.9e-11 75.5 170 36.5
AL1G58490 Arabidopsis lyrata HOM05D001371 ORTHO05D001319 6.0e-10 70.5 130 38.5
Sp1g38170 Schrenkiella parvula HOM05D001371 ORTHO05D001319 2.3e-09 68.6 185 31.9
CARHR041490 Cardamine hirsuta HOM05D001371 ORTHO05D001319 6.7e-09 67.0 242 31.4
Thhalv10012017m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 1.1e-08 66.2 324 27.5
AT1G48145 Arabidopsis thaliana HOM05D001371 ORTHO05D019742 2.5e-08 65.1 106 43.4
A06p02410 Brassica napus HOM05D001371 ORTHO05D001319 7.4e-08 63.5 323 28.5
AT1G50750 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 1.6e-07 62.4 101 37.6
BcaC08g43318 Brassica carinata HOM05D000857 ORTHO05D001319 3.6e-07 61.2 150 33.3
CARHR056730 Cardamine hirsuta HOM05D001371 ORTHO05D019742 4.8e-07 60.8 70 51.4
CARHR153280 Cardamine hirsuta HOM05D001371 ORTHO05D019742 4.8e-07 60.8 81 43.2
CARHR040880 Cardamine hirsuta HOM05D001371 ORTHO05D001319 6.2e-07 60.5 235 30.2
BcaB07g33619 Brassica carinata HOM05D001371 ORTHO05D001319 1.8e-06 58.9 142 35.9
BcaB07g33604 Brassica carinata HOM05D001371 ORTHO05D001319 3.1e-06 58.2 268 29.9
BcaB07g33597 Brassica carinata HOM05D001371 ORTHO05D001319 4.0e-06 57.8 259 29.3


User provided reference genes

Program Settings