Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33586 Brassica carinata HOM05D004268 ORTHO05D004958 3.5e-20 101.7 104 100.0
A06p02510 Brassica napus HOM05D004268 ORTHO05D004958 1.6e-17 92.8 104 56.7
BcaC08g43309 Brassica carinata HOM05D004268 ORTHO05D004958 3.7e-17 91.7 104 55.8
C06p06560 Brassica napus HOM05D004268 ORTHO05D004958 3.7e-17 91.7 104 55.8
BolC6t35768H Brassica oleracea HOM05D004268 ORTHO05D004958 3.7e-17 91.7 104 55.8
Thhalv10011883m.g Eutrema salsugineum HOM05D004268 ORTHO05D004958 3.1e-16 88.6 107 53.3
BraA06t23458Z Brassica rapa HOM05D004268 ORTHO05D004958 4.1e-16 88.2 104 83.7
AT1G51400 Arabidopsis thaliana HOM05D004268 ORTHO05D004958 1.5e-15 86.3 107 52.3
AL1G59250 Arabidopsis lyrata HOM05D004268 ORTHO05D004958 2.6e-15 85.5 107 51.4
CARHR041550 Cardamine hirsuta HOM05D004268 ORTHO05D004958 1.7e-14 82.8 107 49.5
Sp1g38070 Schrenkiella parvula HOM05D004268 ORTHO05D004958 3.8e-14 81.6 108 49.1
Aa31LG10G3570 Aethionema arabicum HOM05D004268 ORTHO05D004958 1.5e-10 69.7 113 44.2
BcaC01g03530 Brassica carinata HOM05D004268 ORTHO05D004958 8.2e-09 63.9 105 48.6
C03p51410 Brassica napus HOM05D004268 ORTHO05D004958 8.2e-09 63.9 105 42.9
BolC3t17427H Brassica oleracea HOM05D004268 ORTHO05D004958 8.2e-09 63.9 105 48.6
BcaC09g49044 Brassica carinata HOM05D004268 ORTHO05D004958 1.1e-08 63.5 107 55.1
A03p42000 Brassica napus HOM05D004268 ORTHO05D004958 1.1e-08 63.5 108 71.3
BraA01t03491Z Brassica rapa HOM05D004268 ORTHO05D004958 1.1e-08 63.5 105 63.8
BraA03t13354Z Brassica rapa HOM05D004268 ORTHO05D004958 1.1e-08 63.5 108 41.7
Carub.0003s2095 Capsella rubella HOM05D004268 ORTHO05D004958 1.1e-08 63.5 108 41.7
AL3G35000 Arabidopsis lyrata HOM05D004268 ORTHO05D004958 1.4e-08 63.2 105 41.9
BcaB04g20616 Brassica carinata HOM05D004268 ORTHO05D004958 1.4e-08 63.2 105 72.4
Thhalv10021813m.g Eutrema salsugineum HOM05D004268 ORTHO05D004958 1.4e-08 63.2 108 42.6
A01p33800 Brassica napus HOM05D004268 ORTHO05D004958 1.8e-08 62.8 105 63.8
BcaC05g28213 Brassica carinata HOM05D004268 ORTHO05D004958 3.1e-08 62.0 113 40.7
C05p43040 Brassica napus HOM05D004268 ORTHO05D004958 3.1e-08 62.0 113 40.7
BolC5t33035H Brassica oleracea HOM05D004268 ORTHO05D004958 3.1e-08 62.0 113 40.7
BraA05t21659Z Brassica rapa HOM05D004268 ORTHO05D004958 4.1e-08 61.6 106 40.6
Sp3g19010 Schrenkiella parvula HOM05D004268 ORTHO05D004958 5.3e-08 61.2 108 65.7
AT3G21055 Arabidopsis thaliana HOM05D004268 ORTHO05D004958 6.9e-08 60.8 105 41.0
BcaB06g26173 Brassica carinata HOM05D004268 ORTHO05D004958 6.9e-08 60.8 106 40.6
CARHR096900 Cardamine hirsuta HOM05D004268 ORTHO05D004958 9.1e-08 60.5 105 41.9
Aa31LG8G7770 Aethionema arabicum HOM05D004268 ORTHO05D004958 1.5e-07 59.7 108 39.8
C01p43220 Brassica napus HOM05D004268 ORTHO05D004958 1.5e-07 59.7 105 54.3
A05p27660 Brassica napus HOM05D004268 ORTHO05D004958 4.5e-07 58.2 113 38.1
BolC1t04268H Brassica oleracea HOM05D004268 ORTHO05D004958 4.5e-07 58.2 105 60.0
BcaB04g19135 Brassica carinata HOM05D004268 ORTHO05D004958 1.0e-06 57.0 105 71.4
HanXRQChr02g0052031 Helianthus annuus HOM05D004268 ORTHO05D004958 1.0e-06 57.0 111 37.8
HanXRQChr13g0401101 Helianthus annuus HOM05D004268 ORTHO05D004958 1.7e-06 56.2 28 89.3
THA.LOC104816876 Tarenaya hassleriana HOM05D004268 ORTHO05D004958 1.7e-06 56.2 115 36.5
Gohir.A09G113900 Gossypium hirsutum HOM05D004268 ORTHO05D004958 2.2e-06 55.8 28 89.3
Gohir.D09G110500 Gossypium hirsutum HOM05D004268 ORTHO05D004958 2.2e-06 55.8 28 89.3
Medtr3g030850 Medicago truncatula HOM05D004268 ORTHO05D004958 2.2e-06 55.8 28 89.3
TPR.G35302 Trifolium pratense HOM05D004268 ORTHO05D004958 2.2e-06 55.8 28 89.3
FAN21G1561 Fragaria x ananassa HOM05D004268 ORTHO05D004958 3.8e-06 55.1 108 52.8
PGR102G2953 Punica granatum HOM05D004268 ORTHO05D004958 3.8e-06 55.1 28 82.1
Glyma.15G275700 Glycine max HOM05D004268 ORTHO05D004958 5.0e-06 54.7 28 85.7
Lsat_1_v5_gn_6_25460 Lactuca sativa HOM05D004268 ORTHO05D004958 5.0e-06 54.7 28 89.3
Haze_23147 Corylus avellana HOM05D004268 ORTHO05D004958 8.5e-06 53.9 104 39.4
ECA233G4176 Erigeron canadensis HOM05D004268 ORTHO05D004958 8.5e-06 53.9 111 51.4
Migut.N02326 Erythranthe guttata HOM05D004268 ORTHO05D004958 8.5e-06 53.9 28 82.1


User provided reference genes

Program Settings