Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33547 Brassica carinata HOM05D006694 ORTHO05D014504 1.1e-46 189.5 90 100.0
C05p11260 Brassica napus HOM05D006694 ORTHO05D008240 3.8e-18 94.7 76 61.8
BolC5t29875H Brassica oleracea HOM05D006694 ORTHO05D008240 4.9e-18 94.4 76 60.5
BraA06t24145Z Brassica rapa HOM05D006694 ORTHO05D008240 8.4e-18 93.6 75 62.7
Sp1g10540 Schrenkiella parvula HOM05D006694 ORTHO05D008240 7.1e-17 90.5 72 62.5
A06p09550 Brassica napus HOM05D006694 ORTHO05D008240 1.2e-16 89.7 75 60.0
Thhalv10006947m.g Eutrema salsugineum HOM05D006694 ORTHO05D008240 3.5e-16 88.2 76 57.9
Aa31LG5G8930 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.1e-14 83.2 76 57.9
AL7G24620 Arabidopsis lyrata HOM05D006694 ORTHO05D008240 7.3e-14 80.5 70 58.6
Aa31sc233G50 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.2e-13 79.7 76 59.2
Aa31LG5G9000 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.6e-13 79.3 76 55.3
BcaB02g10473 Brassica carinata HOM05D012099 ORTHO05D014504 1.6e-13 79.3 57 71.9
CARHR235710 Cardamine hirsuta HOM05D006694 ORTHO05D008240 3.6e-13 78.2 68 58.8
Aa31sc233G40 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.1e-12 76.6 76 57.9
Aa31sc233G60 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.1e-12 76.6 76 57.9
Aa31LG2G18100 Aethionema arabicum HOM05D006694 ORTHO05D008240 5.3e-12 74.3 76 55.3
Aa31sc233G30 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.9e-12 73.9 76 52.6
BcaC01g03454 Brassica carinata HOM05D012099 ORTHO05D014504 4.4e-11 71.2 52 67.3
Aa31LG2G18070 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.7e-10 69.3 76 52.6
Aa31LG2G18090 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.7e-10 69.3 76 52.6
BolC2t07316H Brassica oleracea HOM05D012099 ORTHO05D014504 1.4e-09 66.2 42 76.2
BolC9t53522H Brassica oleracea HOM05D012099 ORTHO05D014504 1.4e-09 66.2 42 76.2
Aa31LG10G10300 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.2e-09 64.7 76 47.4
Aa31LG6G11690 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.2e-08 63.2 75 49.3
Aa31LG6G5330 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.2e-08 63.2 75 49.3
Aa31LG6G11680 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.1e-08 62.4 75 46.7
Aa31LG6G5340 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.1e-08 62.4 75 46.7
C03p32380 Brassica napus HOM05D012099 ORTHO05D014504 3.5e-08 61.6 41 73.2
C07p23600 Brassica napus HOM05D012099 ORTHO05D014504 3.5e-08 61.6 41 73.2
THA.LOC104800448 Tarenaya hassleriana HOM05D006694 ORTHO05D008240 4.6e-08 61.2 76 44.7
C07p46140 Brassica napus HOM05D012099 ORTHO05D014504 1.3e-07 59.7 31 83.9
C09p05970 Brassica napus HOM05D012099 ORTHO05D014504 1.3e-07 59.7 31 83.9
BolC7t45130H Brassica oleracea HOM05D012099 ORTHO05D014504 1.3e-07 59.7 34 76.5
AT4G28010 Arabidopsis thaliana HOM05D006694 ORTHO05D008240 3.9e-07 58.2 66 48.5
Aa31LG8G12540 Aethionema arabicum HOM05D006694 ORTHO05D008240 8.7e-07 57.0 75 45.3
QL01p017030 Quercus lobata HOM05D006694 ORTHO05D008240 7.3e-06 53.9 76 39.5


User provided reference genes

Program Settings