Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33536 Brassica carinata HOM05D001371 ORTHO05D001319 1.2e-242 842.8 432 100.0
C06p06140 Brassica napus HOM05D001371 ORTHO05D001319 5.3e-78 295.8 458 45.6
C06p06110 Brassica napus HOM05D001371 ORTHO05D001319 6.8e-65 252.3 461 46.2
BolC6t35723H Brassica oleracea HOM05D001371 ORTHO05D001319 6.8e-65 252.3 461 46.2
BcaC08g43266 Brassica carinata HOM05D001371 ORTHO05D001319 8.0e-58 228.8 251 54.6
BcaC08g43265 Brassica carinata HOM05D001371 ORTHO05D001319 3.4e-56 223.4 361 47.4
BolC6t35725H Brassica oleracea HOM05D001371 ORTHO05D001319 3.4e-56 223.4 441 40.1
C06p06120 Brassica napus HOM05D001371 ORTHO05D001319 2.0e-53 214.2 442 39.8
BraA06t23487Z Brassica rapa HOM05D001371 ORTHO05D001319 1.2e-48 198.4 448 39.7
AL1G58510 Arabidopsis lyrata HOM05D001371 ORTHO05D001319 1.7e-47 194.5 463 35.4
Thhalv10012003m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 1.6e-45 188.0 538 34.2
AT1G50790 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 1.7e-44 184.5 458 35.2
AT1G50820 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 5.6e-35 152.9 434 33.2
A06p02800 Brassica napus HOM05D001371 ORTHO05D001319 1.6e-29 134.8 427 33.3
BcaC08g43267 Brassica carinata HOM05D001371 ORTHO05D019742 3.4e-24 117.1 160 53.1
A06p02410 Brassica napus HOM05D001371 ORTHO05D001319 7.6e-24 115.9 294 32.3
BcaB07g33605 Brassica carinata HOM05D001371 ORTHO05D001319 7.1e-22 109.4 371 31.8
A06p02420 Brassica napus HOM05D001371 ORTHO05D001319 3.5e-21 107.1 270 35.6
AT1G50770 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 2.5e-19 100.9 444 31.1
AT1G50745 Arabidopsis thaliana HOM05D001371 ORTHO05D019742 4.3e-19 100.1 315 33.3
BraA06t23449Z Brassica rapa HOM05D001371 ORTHO05D001319 1.1e-17 95.5 278 32.7
Sp1g38180 Schrenkiella parvula HOM05D001371 ORTHO05D001319 3.4e-16 90.5 373 28.4
BcaB07g33606 Brassica carinata HOM05D001371 ORTHO05D001319 5.8e-16 89.7 353 28.6
AT1G50750 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 2.9e-15 87.4 58 65.5
Thhalv10012297m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 1.9e-14 84.7 94 52.1
CARHR041470 Cardamine hirsuta HOM05D001371 ORTHO05D001319 4.2e-14 83.6 371 30.7
BraA06t23450Z Brassica rapa HOM05D001371 ORTHO05D001319 3.5e-13 80.5 273 29.3
A08p02670 Brassica napus HOM05D001371 ORTHO05D001319 4.6e-13 80.1 299 30.1
CARHR041490 Cardamine hirsuta HOM05D001371 ORTHO05D001319 1.0e-12 79.0 393 26.0
AL1G58490 Arabidopsis lyrata HOM05D001371 ORTHO05D001319 5.1e-12 76.6 399 27.3
C06p06700 Brassica napus HOM05D001371 ORTHO05D001319 8.7e-12 75.9 420 24.5
BcaB07g33619 Brassica carinata HOM05D001371 ORTHO05D001319 1.6e-10 71.6 321 26.8
C06p06680 Brassica napus HOM05D001371 ORTHO05D001319 2.1e-10 71.2 153 36.6
BcaB07g33607 Brassica carinata HOM05D001371 ORTHO05D001319 3.6e-10 70.5 404 23.8
BcaC01g01280 Brassica carinata HOM05D001371 ORTHO05D001319 3.6e-10 70.5 351 30.2
C03p90170 Brassica napus HOM05D001371 ORTHO05D001319 3.6e-10 70.5 351 30.2
BolC3t21339H Brassica oleracea HOM05D001371 ORTHO05D001319 3.6e-10 70.5 351 30.2
BraA06t23448Z Brassica rapa HOM05D001371 ORTHO05D001319 3.6e-10 70.5 48 60.4
BcaC08g43317 Brassica carinata HOM05D001371 ORTHO05D001319 6.2e-10 69.7 153 35.9
BolC6t35779H Brassica oleracea HOM05D000857 ORTHO05D001319 6.2e-10 69.7 153 35.9
BcaC08g43319 Brassica carinata HOM05D001371 ORTHO05D001319 5.3e-09 66.6 549 23.1
BolC6t35780H Brassica oleracea HOM05D001371 ORTHO05D001319 5.3e-09 66.6 549 23.1
Sp1g38170 Schrenkiella parvula HOM05D001371 ORTHO05D001319 3.4e-08 63.9 172 34.3
AT1G51538 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 5.8e-08 63.2 291 27.5
A06p02440 Brassica napus HOM05D001371 ORTHO05D001319 5.8e-08 63.2 44 54.5
AL1G66290 Arabidopsis lyrata HOM05D001371 ORTHO05D001319 3.8e-07 60.5 51 52.9
CARHR153280 Cardamine hirsuta HOM05D001371 ORTHO05D019742 6.4e-07 59.7 87 40.2
CARHR056730 Cardamine hirsuta HOM05D001371 ORTHO05D019742 1.1e-06 58.9 99 36.4
Thhalv10012017m.g Eutrema salsugineum HOM05D001371 ORTHO05D001319 5.4e-06 56.6 336 25.9
AL1G66300 Arabidopsis lyrata HOM05D001371 ORTHO05D001319 9.3e-06 55.8 34 73.5


User provided reference genes

Program Settings