Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33533 Brassica carinata HOM05D010922 ORTHO05D011067 1.7e-75 286.2 179 100.0
A06p02810 Brassica napus HOM05D010922 ORTHO05D011067 1.3e-67 260.0 179 90.5
BraA06t23488Z Brassica rapa HOM05D010922 ORTHO05D011067 6.7e-67 257.7 179 86.0
C06p06090 Brassica napus HOM05D010922 ORTHO05D011067 9.0e-64 247.3 179 83.8
BolC6t35722H Brassica oleracea HOM05D010922 ORTHO05D011067 9.0e-64 247.3 179 83.8
Sp1g37670 Schrenkiella parvula HOM05D010922 ORTHO05D011067 3.9e-51 205.3 198 70.2
Thhalv10011976m.g Eutrema salsugineum HOM05D010922 ORTHO05D011067 4.1e-48 195.3 194 70.6
AL1G58650 Arabidopsis lyrata HOM05D010922 ORTHO05D011067 5.9e-47 191.4 197 73.1
AT1G50930 Arabidopsis thaliana HOM05D010922 ORTHO05D011067 8.5e-46 187.6 198 72.2
CARHR040970 Cardamine hirsuta HOM05D010922 ORTHO05D011067 3.3e-42 175.6 199 65.8
BcaB02g11196 Brassica carinata HOM05D010922 ORTHO05D011067 1.4e-40 170.2 197 67.5
BcaB02g11197 Brassica carinata HOM05D010922 ORTHO05D011067 1.4e-40 170.2 197 67.5
BcaC05g27377 Brassica carinata HOM05D010922 ORTHO05D011067 4.1e-40 168.7 196 65.3
C05p33110 Brassica napus HOM05D010922 ORTHO05D011067 1.5e-39 166.8 196 68.9
BolC5t32043H Brassica oleracea HOM05D010922 ORTHO05D011067 1.5e-39 166.8 196 68.9
A05p19850 Brassica napus HOM05D010922 ORTHO05D011067 1.4e-37 160.2 197 62.4
BraA05t20890Z Brassica rapa HOM05D010922 ORTHO05D011067 1.4e-37 160.2 197 62.4
Carub.0001s3987 Capsella rubella HOM05D010922 ORTHO05D011067 4.4e-34 148.7 198 62.6
BcaC09g50965 Brassica carinata HOM05D010509 ORTHO05D011067 8.5e-14 81.3 182 37.4
Sp3g18570 Schrenkiella parvula HOM05D010509 ORTHO05D011067 9.4e-13 77.8 180 36.1
C01p18680 Brassica napus HOM05D010509 ORTHO05D011067 1.6e-12 77.0 180 36.7
BolC1t01796H Brassica oleracea HOM05D010509 ORTHO05D011067 1.6e-12 77.0 180 36.7
CARHR096340 Cardamine hirsuta HOM05D010509 ORTHO05D011067 2.1e-12 76.6 180 35.0
AT3G20557 Arabidopsis thaliana HOM05D010509 ORTHO05D011067 4.7e-12 75.5 180 36.1
BcaC05g28316 Brassica carinata HOM05D010509 ORTHO05D011067 4.7e-12 75.5 180 36.1
A01p34240 Brassica napus HOM05D010509 ORTHO05D011067 8.0e-12 74.7 180 36.1
BraA01t03523Z Brassica rapa HOM05D010509 ORTHO05D011067 8.0e-12 74.7 180 36.1
C01p43630 Brassica napus HOM05D010509 ORTHO05D011067 2.3e-11 73.2 180 35.6
BolC1t04323H Brassica oleracea HOM05D010509 ORTHO05D011067 2.3e-11 73.2 180 35.6
BcaB04g20646 Brassica carinata HOM05D010509 ORTHO05D011067 5.2e-11 72.0 180 33.9
A05p28290 Brassica napus HOM05D010509 ORTHO05D011067 8.8e-11 71.2 180 35.6
BolC5t33093H Brassica oleracea HOM05D010509 ORTHO05D011067 8.8e-11 71.2 180 35.6
BraA05t21711Z Brassica rapa HOM05D010509 ORTHO05D011067 8.8e-11 71.2 180 35.6
BcaC09g49001 Brassica carinata HOM05D010509 ORTHO05D011067 1.2e-10 70.9 180 35.0
Carub.0003s2053 Capsella rubella HOM05D010509 ORTHO05D011067 1.5e-10 70.5 183 33.3
BolC2t07773H Brassica oleracea HOM05D010845 ORTHO05D002692 3.4e-10 69.3 186 30.6
C05p43770 Brassica napus HOM05D010509 ORTHO05D011067 7.5e-10 68.2 180 35.0
AT5G54790 Arabidopsis thaliana HOM05D010845 ORTHO05D002692 9.8e-10 67.8 183 31.1
BcaC03g14288 Brassica carinata HOM05D010845 ORTHO05D002692 9.8e-10 67.8 186 30.6
AL8G30220 Arabidopsis lyrata HOM05D010845 ORTHO05D002692 2.2e-09 66.6 182 29.7
A02p10030 Brassica napus HOM05D010845 ORTHO05D002692 2.8e-09 66.2 186 31.2
Carub.0008s1506 Capsella rubella HOM05D010845 ORTHO05D002692 2.8e-09 66.2 186 33.3
BraA02t06071Z Brassica rapa HOM05D010845 ORTHO05D002692 8.3e-09 64.7 186 30.6
BcaB05g22158 Brassica carinata HOM05D010845 ORTHO05D002692 1.8e-08 63.5 186 29.6
Aa31LG8G7360 Aethionema arabicum HOM05D010509 ORTHO05D011067 2.4e-08 63.2 181 31.5
AL3G34410 Arabidopsis lyrata HOM05D010509 ORTHO05D011067 2.4e-08 63.2 181 31.5
Sp6g16730 Schrenkiella parvula HOM05D010845 ORTHO05D002692 5.4e-08 62.0 182 28.6
A10p12040 Brassica napus HOM05D010845 ORTHO05D002692 1.0e-06 57.8 184 29.3
BcaB08g35844 Brassica carinata HOM05D010845 ORTHO05D002692 8.6e-06 54.7 183 29.0


User provided reference genes

Program Settings