Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33403 Brassica carinata HOM05D004342 ORTHO05D093493 9.9e-126 453.4 215 100.0
BcaB01g01402 Brassica carinata HOM05D004342 ORTHO05D011040 1.0e-69 267.3 147 88.4
BcaB03g16647 Brassica carinata HOM05D004342 ORTHO05D011040 1.0e-69 267.3 147 87.8
BcaB08g35403 Brassica carinata HOM05D004342 ORTHO05D011040 1.7e-69 266.5 147 89.1
BcaB08g35473 Brassica carinata HOM05D004342 ORTHO05D011040 2.9e-69 265.8 147 88.4
BcaB05g23589 Brassica carinata HOM05D004342 ORTHO05D011040 1.2e-59 233.8 152 78.9
BcaC03g15908 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-55 220.7 146 74.7
C04p46690 Brassica napus HOM05D004342 ORTHO05D011040 1.1e-55 220.7 144 75.0
BraA02t07939Z Brassica rapa HOM05D004342 ORTHO05D107931 1.3e-53 213.8 153 70.6
C04p26830 Brassica napus HOM05D004342 ORTHO05D011040 1.9e-52 209.9 146 74.0
C02p48390 Brassica napus HOM05D004342 ORTHO05D011040 4.3e-52 208.8 143 72.7
BolC2t10870H Brassica oleracea HOM05D004342 ORTHO05D011040 4.3e-52 208.8 143 72.7
BcaB05g23453 Brassica carinata HOM05D004342 ORTHO05D011040 6.2e-51 204.9 145 68.3
BolC4t26257H Brassica oleracea HOM05D004342 ORTHO05D011040 6.2e-51 204.9 154 68.2
BolC4t24121H Brassica oleracea HOM05D004342 ORTHO05D011040 6.8e-50 201.4 153 69.9
BcaB08g35285 Brassica carinata HOM05D004342 ORTHO05D011040 2.0e-49 199.9 145 67.6
BraA04t16111Z Brassica rapa HOM05D004342 ORTHO05D011040 2.0e-49 199.9 144 70.8
C09p56360 Brassica napus HOM05D004342 ORTHO05D011040 4.4e-49 198.7 145 71.7
BcaC04g19377 Brassica carinata HOM05D004342 ORTHO05D011040 5.8e-49 198.4 145 71.7
BcaB06g27914 Brassica carinata HOM05D004342 ORTHO05D011040 1.3e-48 197.2 146 66.4
BcaB02g06560 Brassica carinata HOM05D004342 ORTHO05D011040 1.7e-48 196.8 149 65.1
BcaB05g23725 Brassica carinata HOM05D004342 ORTHO05D011040 4.9e-48 195.3 147 70.1
BcaC03g16189 Brassica carinata HOM05D004342 ORTHO05D011040 4.9e-48 195.3 144 70.8
BcaC05g27753 Brassica carinata HOM05D004342 ORTHO05D032754 6.4e-48 194.9 133 73.7
BcaB01g02102 Brassica carinata HOM05D004342 ORTHO05D011040 8.3e-48 194.5 145 66.2
A10p08140 Brassica napus HOM05D004342 ORTHO05D014936 1.1e-47 194.1 149 68.5
BcaB08g35544 Brassica carinata HOM05D004342 ORTHO05D011040 3.2e-47 192.6 145 65.5
BraSC35t45984Z Brassica rapa HOM05D004342 ORTHO05D014936 5.4e-47 191.8 148 66.9
BcaB07g32852 Brassica carinata HOM05D004342 ORTHO05D011040 7.0e-47 191.4 147 69.4
BolC9t58505H Brassica oleracea HOM05D004342 ORTHO05D011040 3.9e-45 185.7 146 69.2
BolC6t36906H Brassica oleracea HOM05D004342 ORTHO05D011040 8.6e-45 184.5 150 65.3
C03p70160 Brassica napus HOM05D004342 ORTHO05D011040 2.5e-44 183.0 125 76.0
BraA01t02418Z Brassica rapa HOM05D004342 ORTHO05D011040 4.3e-44 182.2 147 69.4
C03p68080 Brassica napus HOM05D004342 ORTHO05D042288 8.1e-43 177.9 143 62.2
BolC3t19031H Brassica oleracea HOM05D004342 ORTHO05D042288 8.1e-43 177.9 143 62.2
BcaB02g10664 Brassica carinata HOM05D004342 ORTHO05D011040 5.2e-42 175.3 145 60.7
A02p29080 Brassica napus HOM05D004342 ORTHO05D042860 4.4e-41 172.2 136 66.9
C05p32840 Brassica napus HOM05D004342 ORTHO05D041540 5.8e-41 171.8 126 69.8
BcaB06g27477 Brassica carinata HOM05D004342 ORTHO05D011040 1.3e-40 170.6 145 60.0
BolC5t32015H Brassica oleracea HOM05D004342 ORTHO05D041540 2.2e-40 169.9 126 69.0
C07p14140 Brassica napus HOM05D004342 ORTHO05D014936 2.9e-40 169.5 123 72.4
C02p39690 Brassica napus HOM05D004342 ORTHO05D014936 3.7e-40 169.1 122 73.0
BcaB03g16622 Brassica carinata HOM05D004342 ORTHO05D011040 4.9e-40 168.7 145 59.3
BolC7t40696H Brassica oleracea HOM05D004342 ORTHO05D042740 4.9e-40 168.7 144 61.1
BolC7t41910H Brassica oleracea HOM05D004342 ORTHO05D014936 4.9e-40 168.7 123 72.4
BcaC08g47011 Brassica carinata HOM05D004342 ORTHO05D011040 1.4e-39 167.2 146 58.9
BolC2t09673H Brassica oleracea HOM05D004342 ORTHO05D042860 1.4e-39 167.2 133 67.7
C07p03020 Brassica napus HOM05D004342 ORTHO05D042740 2.7e-38 162.9 144 59.0
BcaB06g27355 Brassica carinata HOM05D004342 ORTHO05D011040 6.0e-38 161.8 131 63.4
BcaB04g18145 Brassica carinata HOM05D004342 ORTHO05D011040 7.8e-38 161.4 146 57.5
BcaB05g23199 Brassica carinata HOM05D004342 ORTHO05D011040 1.9e-36 156.8 146 56.8
BcaB06g27861 Brassica carinata HOM05D004342 ORTHO05D011040 1.9e-36 156.8 132 61.4
C07p09210 Brassica napus HOM05D004342 ORTHO05D014936 1.9e-36 156.8 121 65.3
BolC7t41332H Brassica oleracea HOM05D004342 ORTHO05D014936 1.9e-36 156.8 121 65.3
A01p25070 Brassica napus HOM05D004342 ORTHO05D011040 1.2e-35 154.1 126 70.6
C07p02600 Brassica napus HOM05D004342 ORTHO05D040391 1.2e-35 154.1 144 58.3
BolC7t40658H Brassica oleracea HOM05D004342 ORTHO05D040391 2.8e-35 152.9 144 57.6
C08p23450 Brassica napus HOM05D004342 ORTHO05D042841 1.1e-34 151.0 142 57.7
BolC8t49973H Brassica oleracea HOM05D004342 ORTHO05D042841 1.1e-34 151.0 142 57.7
C05p37450 Brassica napus HOM05D004342 ORTHO05D032754 3.8e-32 142.5 91 79.1
BolC2t09619H Brassica oleracea HOM05D004342 ORTHO05D033291 5.4e-31 138.7 143 53.1
BcaB07g33971 Brassica carinata HOM05D004342 ORTHO05D011040 9.2e-31 137.9 137 56.2
BolC3t19271H Brassica oleracea HOM05D004342 ORTHO05D032754 1.6e-30 137.1 143 53.8
BolC5t33355H Brassica oleracea HOM05D004342 ORTHO05D016748 2.1e-30 136.7 93 73.1
C02p40200 Brassica napus HOM05D004342 ORTHO05D014936 7.8e-30 134.8 120 55.8
A04p03900 Brassica napus HOM05D004342 ORTHO05D018601 2.3e-29 133.3 89 77.5
C02p36040 Brassica napus HOM05D004342 ORTHO05D033291 6.6e-29 131.7 141 51.8
C06p17080 Brassica napus HOM05D004342 ORTHO05D016748 8.6e-29 131.3 93 74.2
BraA09t39012Z Brassica rapa HOM05D004342 ORTHO05D041860 8.6e-29 131.3 167 48.5
A01p28260 Brassica napus HOM05D004342 ORTHO05D014936 4.3e-28 129.0 101 64.4
BolC8t47840H Brassica oleracea HOM05D004342 ORTHO05D016748 4.3e-28 129.0 101 66.3
A03p66330 Brassica napus HOM05D000062 ORTHO05D000043 5.6e-28 128.6 98 68.4
BolC5t32487H Brassica oleracea HOM05D004342 ORTHO05D016748 5.6e-28 128.6 72 84.7
A09p34820 Brassica napus HOM05D004342 ORTHO05D041860 7.3e-28 128.3 142 53.5
C05p46270 Brassica napus HOM05D004342 ORTHO05D016748 1.6e-27 127.1 101 65.3
BcaC08g44285 Brassica carinata HOM05D004342 ORTHO05D016748 3.6e-27 125.9 89 73.0
C02p36010 Brassica napus HOM05D004342 ORTHO05D033291 6.2e-27 125.2 134 52.2
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 4.0e-26 122.5 147 47.6
A07p06040 Brassica napus HOM05D004342 ORTHO05D101341 1.7e-24 117.1 141 44.7
BraA03t15693Z Brassica rapa HOM05D004342 ORTHO05D027051 1.7e-24 117.1 87 69.0
C03p88250 Brassica napus HOM05D004342 ORTHO05D018601 2.9e-24 116.3 95 68.4
BraA07t27945Z Brassica rapa HOM05D004342 ORTHO05D014936 3.8e-24 115.9 106 59.4
BcaB04g18376 Brassica carinata HOM05D004342 ORTHO05D018601 6.4e-24 115.2 89 67.4
BcaB01g01175 Brassica carinata HOM05D004342 ORTHO05D018601 8.4e-24 114.8 100 60.0
BcaB02g07288 Brassica carinata HOM05D004342 ORTHO05D016748 3.2e-23 112.8 90 70.0
C07p06590 Brassica napus HOM05D004342 ORTHO05D042200 3.2e-23 112.8 142 43.7
BolC7t41081H Brassica oleracea HOM05D004342 ORTHO05D042200 3.2e-23 112.8 142 43.7
A06p19230 Brassica napus HOM05D004342 ORTHO05D018601 5.4e-23 112.1 89 66.3
BcaC07g39329 Brassica carinata HOM05D004342 ORTHO05D018601 7.1e-23 111.7 90 64.4
BcaC01g01112 Brassica carinata HOM05D004342 ORTHO05D016748 1.2e-22 110.9 87 70.1
BolC3t21133H Brassica oleracea HOM05D004342 ORTHO05D016748 1.2e-22 110.9 87 70.1
BcaC06g36550 Brassica carinata HOM05D004342 ORTHO05D018601 2.1e-22 110.2 93 62.4
BcaB08g34712 Brassica carinata HOM05D004342 ORTHO05D011040 8.7e-21 104.8 90 56.7
BolC2t09984H Brassica oleracea HOM05D004342 ORTHO05D107287 4.3e-20 102.4 141 41.8
BcaB01g02523 Brassica carinata HOM05D004342 ORTHO05D016748 1.3e-19 100.9 90 62.2
C03p67290 Brassica napus HOM05D004342 ORTHO05D033138 1.8e-18 97.1 142 41.5
BolSC21t60296H Brassica oleracea HOM05D004342 ORTHO05D033138 1.8e-18 97.1 142 41.5
C04p30590 Brassica napus HOM05D004342 ORTHO05D097110 2.4e-18 96.7 105 55.2
BcaB07g33226 Brassica carinata HOM05D004342 ORTHO05D014936 3.4e-17 92.8 102 52.0
BolC6t39191H Brassica oleracea HOM05D004342 ORTHO05D041978 7.6e-17 91.7 102 48.0
C08p05970 Brassica napus HOM05D004342 ORTHO05D098872 1.3e-16 90.9 50 86.0
BraA03t15562Z Brassica rapa HOM05D004342 ORTHO05D014936 5.4e-15 85.5 67 62.7
BcaB06g27423 Brassica carinata HOM05D004342 ORTHO05D027051 1.2e-14 84.3 67 73.1
C03p64680 Brassica napus HOM05D004342 ORTHO05D040895 2.1e-14 83.6 92 52.2
BolC2t08690H Brassica oleracea HOM05D004342 ORTHO05D040487 2.1e-14 83.6 45 80.0
A06p23950 Brassica napus HOM05D004342 ORTHO05D013036 4.6e-14 82.4 52 71.2
A05p21050 Brassica napus HOM05D004342 ORTHO05D013036 7.9e-14 81.6 52 71.2
A06p24190 Brassica napus HOM05D004342 ORTHO05D013036 7.9e-14 81.6 49 75.5
A06p35820 Brassica napus HOM05D004342 ORTHO05D013036 7.9e-14 81.6 49 75.5
A02p33870 Brassica napus HOM05D004342 ORTHO05D013036 1.8e-13 80.5 49 75.5
A06p14130 Brassica napus HOM05D004342 ORTHO05D013036 3.0e-13 79.7 49 73.5
A10p05900 Brassica napus HOM05D004342 ORTHO05D013036 3.0e-13 79.7 49 73.5
BraA07t28391Z Brassica rapa HOM05D004342 ORTHO05D014936 6.7e-13 78.6 90 52.2
C02p26240 Brassica napus HOM05D004342 ORTHO05D040487 8.7e-13 78.2 44 75.0
A07p06290 Brassica napus HOM05D004342 ORTHO05D099060 1.1e-12 77.8 49 73.5
BcaC03g16937 Brassica carinata HOM05D004342 ORTHO05D027051 1.9e-12 77.0 49 81.6
BraA04t16568Z Brassica rapa HOM05D004342 ORTHO05D013036 1.9e-12 77.0 50 74.0
A05p24900 Brassica napus HOM05D004342 ORTHO05D013036 2.5e-12 76.6 49 71.4
BcaC06g35994 Brassica carinata HOM05D004342 ORTHO05D027051 1.3e-11 74.3 64 68.8
C06p42390 Brassica napus HOM05D004342 ORTHO05D041978 2.1e-11 73.6 76 48.7
BolC8t47411H Brassica oleracea HOM05D004342 ORTHO05D106550 9.9e-09 64.7 121 37.2
BraA06t25628Z Brassica rapa HOM05D004342 ORTHO05D033138 9.9e-09 64.7 119 35.3
BraA07t27946Z Brassica rapa HOM05D004342 ORTHO05D108557 1.9e-07 60.5 36 69.4
C01p35180 Brassica napus HOM05D004342 ORTHO05D028050 5.5e-07 58.9 32 81.2
BolC1t03477H Brassica oleracea HOM05D004342 ORTHO05D028050 5.5e-07 58.9 32 81.2
BraA06t25007Z Brassica rapa HOM05D004342 ORTHO05D018601 5.5e-07 58.9 89 43.8


User provided reference genes

Program Settings