Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33402 Brassica carinata HOM05D003591 ORTHO05D005681 8.2e-61 236.9 121 100.0
BcaB02g11544 Brassica carinata HOM05D003591 ORTHO05D005681 7.2e-57 223.8 121 93.4
BcaB03g16445 Brassica carinata HOM05D003591 ORTHO05D096213 1.8e-55 219.2 120 90.8
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 2.3e-55 218.8 121 92.6
BcaB01g01281 Brassica carinata HOM05D003591 ORTHO05D093295 2.0e-54 215.7 121 90.9
BcaB05g24452 Brassica carinata HOM05D003591 ORTHO05D005681 9.7e-54 213.4 121 89.3
BcaB08g35182 Brassica carinata HOM05D003591 ORTHO05D005681 1.6e-51 206.1 121 86.0
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 2.0e-51 205.7 121 85.1
BcaB07g33061 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-48 196.4 121 85.1
BcaB07g33018 Brassica carinata HOM05D003591 ORTHO05D092282 3.6e-48 194.9 121 81.0
BcaB04g19404 Brassica carinata HOM05D003591 ORTHO05D009907 1.0e-47 193.4 119 82.4
BcaB07g33117 Brassica carinata HOM05D003591 ORTHO05D009907 1.6e-43 179.5 109 82.6
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 4.2e-41 171.4 121 76.0
BcaB04g18233 Brassica carinata HOM05D003591 ORTHO05D005681 9.5e-41 170.2 93 93.5
BcaB05g24453 Brassica carinata HOM05D003591 ORTHO05D093807 1.2e-40 169.9 100 86.0
A09p31710 Brassica napus HOM05D003591 ORTHO05D005681 2.3e-39 165.6 122 72.1
BraA09t38302Z Brassica rapa HOM05D003591 ORTHO05D005681 6.8e-39 164.1 122 71.3
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 8.8e-39 163.7 121 68.6
C04p36620 Brassica napus HOM05D003591 ORTHO05D005681 8.8e-39 163.7 121 69.4
BolC4t25135H Brassica oleracea HOM05D003591 ORTHO05D005681 8.8e-39 163.7 121 69.4
BcaB08g35320 Brassica carinata HOM05D003591 ORTHO05D005681 1.5e-38 162.9 115 71.3
A06p32970 Brassica napus HOM05D003591 ORTHO05D005681 4.4e-38 161.4 122 70.5
BraA02t07580Z Brassica rapa HOM05D003591 ORTHO05D005681 4.4e-38 161.4 122 70.5
BraA03t14847Z Brassica rapa HOM05D003591 ORTHO05D005681 4.4e-38 161.4 122 70.5
BraA06t26229Z Brassica rapa HOM05D003591 ORTHO05D005681 4.4e-38 161.4 122 70.5
BraA05t21769Z Brassica rapa HOM05D003591 ORTHO05D005681 5.7e-38 161.0 122 70.5
BcaC06g34843 Brassica carinata HOM05D003591 ORTHO05D005681 7.5e-38 160.6 121 69.4
C02p32250 Brassica napus HOM05D003591 ORTHO05D005681 7.5e-38 160.6 121 68.6
C05p33180 Brassica napus HOM05D003591 ORTHO05D005681 7.5e-38 160.6 121 68.6
C05p35170 Brassica napus HOM05D003591 ORTHO05D005681 7.5e-38 160.6 121 68.6
C07p31990 Brassica napus HOM05D003591 ORTHO05D005681 7.5e-38 160.6 121 68.6
BolC4t25466H Brassica oleracea HOM05D003591 ORTHO05D005681 7.5e-38 160.6 121 68.6
BolC7t41596H Brassica oleracea HOM05D003591 ORTHO05D005681 7.5e-38 160.6 121 69.4
BolC7t42807H Brassica oleracea HOM05D003591 ORTHO05D005681 7.5e-38 160.6 121 69.4
BcaB06g27093 Brassica carinata HOM05D003591 ORTHO05D005681 9.8e-38 160.2 121 66.1
A01p14520 Brassica napus HOM05D003591 ORTHO05D005681 9.8e-38 160.2 118 71.2
A05p27760 Brassica napus HOM05D003591 ORTHO05D005681 9.8e-38 160.2 118 71.2
A06p23350 Brassica napus HOM05D003591 ORTHO05D005681 9.8e-38 160.2 122 69.7
A07p03450 Brassica napus HOM05D003591 ORTHO05D005681 9.8e-38 160.2 122 68.9
A08p10960 Brassica napus HOM05D003591 ORTHO05D005681 9.8e-38 160.2 118 71.2
BolC5t32448H Brassica oleracea HOM05D003591 ORTHO05D005681 9.8e-38 160.2 121 68.6
BcaB03g16209 Brassica carinata HOM05D003591 ORTHO05D005681 1.3e-37 159.8 121 65.3
BcaB04g17486 Brassica carinata HOM05D003591 ORTHO05D005681 1.3e-37 159.8 115 70.4
C09p33370 Brassica napus HOM05D003591 ORTHO05D005681 1.3e-37 159.8 121 67.8
BraA09t39581Z Brassica rapa HOM05D003591 ORTHO05D005681 1.3e-37 159.8 122 69.7
BraSC36t46030Z Brassica rapa HOM05D003591 ORTHO05D005681 1.3e-37 159.8 122 69.7
A06p27640 Brassica napus HOM05D003591 ORTHO05D005681 1.7e-37 159.5 118 70.3
C06p29690 Brassica napus HOM05D003591 ORTHO05D005681 1.7e-37 159.5 121 68.6
BolC5t32233H Brassica oleracea HOM05D003591 ORTHO05D005681 1.7e-37 159.5 121 68.6
A01p28000 Brassica napus HOM05D003591 ORTHO05D005681 2.2e-37 159.1 122 69.7
C02p22600 Brassica napus HOM05D003591 ORTHO05D005681 2.2e-37 159.1 121 68.6
C02p28120 Brassica napus HOM05D003591 ORTHO05D005681 2.2e-37 159.1 121 68.6
BolC2t08856H Brassica oleracea HOM05D003591 ORTHO05D005681 2.2e-37 159.1 121 68.6
BolC2t09405H Brassica oleracea HOM05D003591 ORTHO05D005681 2.2e-37 159.1 121 67.8
C09p28690 Brassica napus HOM05D003591 ORTHO05D005681 2.8e-37 158.7 121 67.8
C01p40950 Brassica napus HOM05D003591 ORTHO05D005681 3.7e-37 158.3 121 67.8
C04p36250 Brassica napus HOM05D003591 ORTHO05D005681 3.7e-37 158.3 121 67.8
BolC4t25162H Brassica oleracea HOM05D003591 ORTHO05D005681 3.7e-37 158.3 121 67.8
BcaB06g27013 Brassica carinata HOM05D003591 ORTHO05D005681 4.9e-37 157.9 115 70.4
C04p15980 Brassica napus HOM05D003591 ORTHO05D005681 4.9e-37 157.9 121 66.9
A02p27490 Brassica napus HOM05D003591 ORTHO05D005681 6.3e-37 157.5 122 68.9
C01p09530 Brassica napus HOM05D003591 ORTHO05D005681 6.3e-37 157.5 121 66.9
BolC1t02629H Brassica oleracea HOM05D003591 ORTHO05D005681 6.3e-37 157.5 121 67.8
BolC2t09403H Brassica oleracea HOM05D003591 ORTHO05D005681 6.3e-37 157.5 121 67.8
BolC3t15622H Brassica oleracea HOM05D003591 ORTHO05D005681 6.3e-37 157.5 121 66.9
BolC4t23171H Brassica oleracea HOM05D003591 ORTHO05D005681 6.3e-37 157.5 121 66.9
BraA02t07777Z Brassica rapa HOM05D003591 ORTHO05D005681 6.3e-37 157.5 122 68.9
C03p87750 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-36 156.8 121 68.6
C04p20950 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-36 156.8 121 66.9
C08p14230 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-36 156.8 121 66.1
BolC9t57338H Brassica oleracea HOM05D003591 ORTHO05D005681 1.1e-36 156.8 121 66.9
BolC2t08413H Brassica oleracea HOM05D003591 ORTHO05D005681 1.4e-36 156.4 121 66.9
BolC3t20044H Brassica oleracea HOM05D003591 ORTHO05D005681 1.4e-36 156.4 121 67.8
BcaB04g17038 Brassica carinata HOM05D003591 ORTHO05D005681 1.8e-36 156.0 115 68.7
BraA06t25603Z Brassica rapa HOM05D003591 ORTHO05D005681 1.8e-36 156.0 122 68.9
C02p34170 Brassica napus HOM05D003591 ORTHO05D005681 2.4e-36 155.6 121 66.9
C02p09960 Brassica napus HOM05D003591 ORTHO05D005681 4.1e-36 154.8 121 66.9
BcaB02g10642 Brassica carinata HOM05D003591 ORTHO05D005681 7.0e-36 154.1 121 65.3
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 7.0e-36 154.1 115 67.8
C04p28010 Brassica napus HOM05D003591 ORTHO05D005681 9.2e-36 153.7 121 66.9
BolC4t24345H Brassica oleracea HOM05D003591 ORTHO05D005681 9.2e-36 153.7 121 66.9
BolC4t27380H Brassica oleracea HOM05D003591 ORTHO05D005681 9.2e-36 153.7 121 66.9
A01p27630 Brassica napus HOM05D003591 ORTHO05D015527 1.6e-35 152.9 114 68.4
C09p13180 Brassica napus HOM05D003591 ORTHO05D005681 3.5e-35 151.8 121 66.9
BolC9t54212H Brassica oleracea HOM05D003591 ORTHO05D005681 3.5e-35 151.8 121 66.9
BcaB04g17785 Brassica carinata HOM05D003591 ORTHO05D094524 4.5e-35 151.4 114 69.3
A01p26630 Brassica napus HOM05D003591 ORTHO05D015527 4.5e-35 151.4 114 67.5
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 7.8e-35 150.6 118 66.1
BraA09t37347Z Brassica rapa HOM05D003591 ORTHO05D005681 7.8e-35 150.6 122 68.9
A03p68610 Brassica napus HOM05D003591 ORTHO05D015527 1.0e-34 150.2 114 66.7
A09p31670 Brassica napus HOM05D003591 ORTHO05D015527 1.0e-34 150.2 114 66.7
A10p07270 Brassica napus HOM05D003591 ORTHO05D015527 1.0e-34 150.2 114 66.7
BolC9t56172H Brassica oleracea HOM05D003591 ORTHO05D005681 1.0e-34 150.2 114 67.5
BcaC01g03288 Brassica carinata HOM05D003591 ORTHO05D005681 1.3e-34 149.8 121 66.1
A05p29690 Brassica napus HOM05D003591 ORTHO05D015527 1.3e-34 149.8 114 66.7
BcaB01g01038 Brassica carinata HOM05D003591 ORTHO05D005681 1.7e-34 149.4 114 67.5
A05p29440 Brassica napus HOM05D003591 ORTHO05D015527 2.3e-34 149.1 114 65.8
A03p66450 Brassica napus HOM05D003591 ORTHO05D015527 2.9e-34 148.7 114 65.8
A05p29680 Brassica napus HOM05D003591 ORTHO05D015527 2.9e-34 148.7 114 65.8
BolC6t37339H Brassica oleracea HOM05D003591 ORTHO05D005681 2.9e-34 148.7 115 67.0
BcaB01g01500 Brassica carinata HOM05D003591 ORTHO05D005681 3.8e-34 148.3 108 70.4
C07p25810 Brassica napus HOM05D003591 ORTHO05D005681 3.8e-34 148.3 121 65.3
BcaB07g33054 Brassica carinata HOM05D003591 ORTHO05D005681 2.5e-33 145.6 115 62.6
C05p37070 Brassica napus HOM05D003591 ORTHO05D005681 7.3e-33 144.1 115 65.2
BcaC05g27725 Brassica carinata HOM05D003591 ORTHO05D005681 4.7e-32 141.4 112 64.3
BcaB03g16169 Brassica carinata HOM05D003591 ORTHO05D005681 6.1e-32 141.0 115 61.7
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 6.1e-32 141.0 104 76.9
BcaB04g17010 Brassica carinata HOM05D003591 ORTHO05D005681 8.0e-32 140.6 121 59.5
BcaB04g17866 Brassica carinata HOM05D003591 ORTHO05D094092 8.0e-32 140.6 108 65.7
BcaC06g34164 Brassica carinata HOM05D003591 ORTHO05D005681 1.8e-31 139.4 114 63.2
BcaC06g35756 Brassica carinata HOM05D003591 ORTHO05D090311 1.8e-31 139.4 114 64.0
BcaC02g09149 Brassica carinata HOM05D003591 ORTHO05D005681 4.0e-31 138.3 114 63.2
C02p51040 Brassica napus HOM05D003591 ORTHO05D005681 5.2e-31 137.9 108 65.7
BcaC02g09819 Brassica carinata HOM05D003591 ORTHO05D005681 6.8e-31 137.5 110 64.5
BcaC02g11382 Brassica carinata HOM05D003591 ORTHO05D005681 8.9e-31 137.1 114 62.3
BcaC03g15229 Brassica carinata HOM05D003591 ORTHO05D003049 8.9e-31 137.1 110 64.5
BcaC02g10879 Brassica carinata HOM05D003591 ORTHO05D092259 2.0e-30 136.0 108 64.8
BcaB05g23044 Brassica carinata HOM05D003591 ORTHO05D005681 3.4e-30 135.2 95 71.6
BcaC04g20349 Brassica carinata HOM05D003591 ORTHO05D005681 4.4e-30 134.8 110 63.6
C07p21330 Brassica napus HOM05D003591 ORTHO05D005681 4.9e-29 131.3 105 65.7
BolC5t33482H Brassica oleracea HOM05D003591 ORTHO05D005681 4.9e-29 131.3 105 65.7
BcaB03g16256 Brassica carinata HOM05D003591 ORTHO05D005681 6.4e-29 131.0 121 57.9
C07p11480 Brassica napus HOM05D003591 ORTHO05D005681 8.3e-29 130.6 99 68.7
BraA09t37386Z Brassica rapa HOM05D003591 ORTHO05D005681 1.1e-28 130.2 100 68.0
BraA09t40594Z Brassica rapa HOM05D003591 ORTHO05D005681 1.8e-28 129.4 100 67.0
A01p33180 Brassica napus HOM05D003591 ORTHO05D005681 9.2e-28 127.1 122 59.8
A03p57820 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-27 126.3 122 59.8
BolC6t38533H Brassica oleracea HOM05D003591 ORTHO05D005681 1.6e-27 126.3 88 71.6
C04p40830 Brassica napus HOM05D003591 ORTHO05D005681 3.5e-27 125.2 99 65.7
BcaB04g18052 Brassica carinata HOM05D003591 ORTHO05D023905 5.9e-27 124.4 91 69.2
BcaB06g26933 Brassica carinata HOM05D003591 ORTHO05D005681 7.8e-27 124.0 98 64.3
BcaC07g37492 Brassica carinata HOM05D003591 ORTHO05D005681 1.3e-26 123.2 88 71.6
BolC8t47808H Brassica oleracea HOM05D003591 ORTHO05D005681 1.3e-26 123.2 88 71.6
BraA06t23871Z Brassica rapa HOM05D003591 ORTHO05D005681 1.3e-26 123.2 93 72.0
BolC4t25666H Brassica oleracea HOM05D003591 ORTHO05D005681 1.7e-26 122.9 88 70.5
BcaC09g49519 Brassica carinata HOM05D003591 ORTHO05D005681 6.6e-26 120.9 105 62.9
A06p20300 Brassica napus HOM05D003591 ORTHO05D005681 1.9e-25 119.4 96 69.8
A08p14820 Brassica napus HOM05D003591 ORTHO05D005681 1.2e-24 116.7 122 54.9
C09p39080 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-24 116.3 121 56.2
C09p26480 Brassica napus HOM05D003591 ORTHO05D005681 3.6e-24 115.2 121 55.4
BcaC02g09280 Brassica carinata HOM05D003591 ORTHO05D093581 4.7e-24 114.8 106 56.6
BcaB04g17398 Brassica carinata HOM05D003591 ORTHO05D091303 8.0e-24 114.0 82 68.3
BcaB05g24917 Brassica carinata HOM05D003591 ORTHO05D005681 1.0e-23 113.6 82 70.7
A07p05580 Brassica napus HOM05D003591 ORTHO05D005681 1.0e-23 113.6 122 55.7
BcaC02g10516 Brassica carinata HOM05D006890 ORTHO05D009907 1.5e-22 109.8 95 63.2
C09p43990 Brassica napus HOM05D003591 ORTHO05D005681 1.5e-22 109.8 121 50.4
BcaB04g18191 Brassica carinata HOM05D003591 ORTHO05D023905 4.4e-22 108.2 80 66.2
BcaB06g26777 Brassica carinata HOM05D003591 ORTHO05D023905 7.5e-22 107.5 88 61.4
A03p63750 Brassica napus HOM05D003591 ORTHO05D103373 2.2e-21 105.9 81 67.9
A09p29800 Brassica napus HOM05D003591 ORTHO05D099288 2.2e-21 105.9 81 67.9
A07p22590 Brassica napus HOM05D003591 ORTHO05D099096 8.3e-21 104.0 96 59.4
BcaB05g23446 Brassica carinata HOM05D003591 ORTHO05D023905 1.9e-20 102.8 81 63.0
C02p44880 Brassica napus HOM05D003591 ORTHO05D005681 2.4e-20 102.4 67 73.1
BcaC03g14809 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-19 100.1 87 60.9
BcaB04g18787 Brassica carinata HOM05D003591 ORTHO05D095528 1.7e-18 96.3 69 68.1
C01p26850 Brassica napus HOM05D003591 ORTHO05D014029 6.6e-18 94.4 121 47.9
BolC8t50331H Brassica oleracea HOM05D003591 ORTHO05D005681 1.9e-17 92.8 59 72.9
A05p23340 Brassica napus HOM05D003591 ORTHO05D015527 4.3e-17 91.7 93 55.9
A05p23640 Brassica napus HOM05D003591 ORTHO05D005681 4.3e-17 91.7 62 71.0
A05p31230 Brassica napus HOM05D003591 ORTHO05D100173 4.3e-17 91.7 93 59.1
BraA05t21231Z Brassica rapa HOM05D003591 ORTHO05D005681 4.3e-17 91.7 62 71.0
BcaB07g33924 Brassica carinata HOM05D006890 ORTHO05D009907 9.5e-17 90.5 106 49.1
BcaB07g32445 Brassica carinata HOM05D003591 ORTHO05D023905 2.1e-16 89.4 57 75.4
BcaB03g16456 Brassica carinata HOM05D003591 ORTHO05D005681 2.3e-15 85.9 76 56.6
C04p57200 Brassica napus HOM05D003591 ORTHO05D005681 4.0e-15 85.1 104 50.0
C07p26060 Brassica napus HOM05D003591 ORTHO05D014535 3.4e-14 82.0 76 57.9
BolC7t43136H Brassica oleracea HOM05D003591 ORTHO05D042843 4.4e-14 81.6 46 82.6
BcaC03g14967 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-12 77.0 115 44.3
BcaB07g33141 Brassica carinata HOM05D013390 ORTHO05D092746 1.9e-12 76.3 45 80.0
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 4.1e-12 75.1 118 41.5
BcaB01g02451 Brassica carinata HOM05D003591 ORTHO05D021638 7.1e-12 74.3 108 38.0
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 1.6e-11 73.2 118 40.7
BcaC03g15680 Brassica carinata HOM05D003591 ORTHO05D031965 2.1e-11 72.8 68 58.8
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 4.6e-11 71.6 118 39.8
A09p40910 Brassica napus HOM05D003591 ORTHO05D099409 6.0e-11 71.2 91 50.5
C04p51490 Brassica napus HOM05D003591 ORTHO05D042843 2.3e-10 69.3 40 82.5
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 3.0e-10 68.9 118 39.0
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 3.0e-10 68.9 118 39.0
BcaB01g01390 Brassica carinata HOM05D001499 ORTHO05D001560 6.6e-10 67.8 44 70.5
BcaB04g17638 Brassica carinata HOM05D003591 ORTHO05D005681 1.9e-09 66.2 121 37.2
BcaC02g09786 Brassica carinata HOM05D003591 ORTHO05D094424 1.2e-08 63.5 55 61.8
BNapus_Darmor_BZH_scaffold_103p00030 Brassica napus HOM05D003591 ORTHO05D015462 1.2e-08 63.5 48 66.7
BNapus_Darmor_BZH_scaffold_104p00030 Brassica napus HOM05D003591 ORTHO05D015462 1.2e-08 63.5 48 66.7
BraSC36t46101Z Brassica rapa HOM05D003591 ORTHO05D015462 1.2e-08 63.5 48 66.7
C04p13460 Brassica napus HOM05D003591 ORTHO05D015462 1.6e-08 63.2 48 66.7
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 6.2e-08 61.2 107 36.4
BcaC09g50299 Brassica carinata HOM05D003591 ORTHO05D005681 6.2e-08 61.2 53 60.4
C03p32830 Brassica napus HOM05D000353 ORTHO05D027041 8.1e-08 60.8 109 37.6
BolC3t15617H Brassica oleracea HOM05D000353 ORTHO05D027041 8.1e-08 60.8 109 37.6
BraA03t15698Z Brassica rapa HOM05D003591 ORTHO05D015462 8.1e-08 60.8 48 64.6
BraA09t38695Z Brassica rapa HOM05D003591 ORTHO05D015462 8.1e-08 60.8 48 64.6
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 1.4e-07 60.1 111 32.4
A03p67750 Brassica napus HOM05D003591 ORTHO05D015462 2.3e-07 59.3 48 62.5
BraA07t28411Z Brassica rapa HOM05D003591 ORTHO05D015462 2.3e-07 59.3 48 62.5
BraSC36t46093Z Brassica rapa HOM05D003591 ORTHO05D015527 3.1e-07 58.9 47 63.8
BraA05t21653Z Brassica rapa HOM05D003591 ORTHO05D107715 4.0e-07 58.5 35 74.3
BolC8t48064H Brassica oleracea HOM05D000353 ORTHO05D033592 8.9e-07 57.4 96 39.6
BraA05t21545Z Brassica rapa HOM05D003591 ORTHO05D107559 8.9e-07 57.4 37 75.7
BcaNung06545 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-06 57.0 84 44.0
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 1.5e-06 56.6 110 34.5
BcaC01g04869 Brassica carinata HOM05D000353 ORTHO05D027041 1.5e-06 56.6 109 35.8


User provided reference genes

Program Settings