Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33396 Brassica carinata HOM05D007458 ORTHO05D009533 3.2e-190 668.3 354 100.0
BcaB03g16648 Brassica carinata HOM05D007458 ORTHO05D009533 1.2e-133 480.3 412 69.9
BcaB08g35266 Brassica carinata HOM05D010120 ORTHO05D009533 1.4e-55 221.1 326 47.9
BcaB03g16419 Brassica carinata HOM05D010120 ORTHO05D009533 1.7e-53 214.2 280 49.6
BcaC05g26694 Brassica carinata HOM05D007458 ORTHO05D009533 9.2e-52 208.4 317 45.1
BcaB07g33289 Brassica carinata HOM05D010120 ORTHO05D015447 4.5e-51 206.1 295 50.2
BcaB06g26935 Brassica carinata HOM05D010120 ORTHO05D009533 6.1e-48 195.7 227 55.9
BcaB05g23743 Brassica carinata HOM05D010120 ORTHO05D009533 1.3e-42 177.9 234 49.6
BcaC03g16557 Brassica carinata HOM05D007458 ORTHO05D009533 8.6e-42 175.3 284 39.8
BcaB05g23486 Brassica carinata HOM05D007458 ORTHO05D009533 1.9e-36 157.5 251 46.2
BcaC05g27697 Brassica carinata HOM05D007458 ORTHO05D009533 1.5e-33 147.9 244 41.4
BolC8t47305H Brassica oleracea HOM05D007458 ORTHO05D009533 9.5e-33 145.2 296 34.1
BcaB02g11382 Brassica carinata HOM05D010120 ORTHO05D095536 3.7e-29 133.3 189 49.2
BcaC05g28693 Brassica carinata HOM05D007458 ORTHO05D009533 9.2e-28 128.6 235 38.7
BcaB02g11394 Brassica carinata HOM05D007458 ORTHO05D095532 3.5e-27 126.7 183 48.1
BcaB02g11303 Brassica carinata HOM05D007458 ORTHO05D093627 2.3e-26 124.0 153 52.9
BcaB04g17858 Brassica carinata HOM05D010120 ORTHO05D009533 7.3e-25 119.0 115 64.3
BcaC02g10564 Brassica carinata HOM05D007458 ORTHO05D009533 1.1e-23 115.2 201 39.8
BcaB05g23109 Brassica carinata HOM05D007458 ORTHO05D009533 2.6e-22 110.5 219 37.4
BcaC07g37473 Brassica carinata HOM05D007458 ORTHO05D009533 4.4e-22 109.8 160 47.5
BolC5t32036H Brassica oleracea HOM05D007458 ORTHO05D009533 4.4e-22 109.8 169 43.2
BolC9t56695H Brassica oleracea HOM05D012587 ORTHO05D016803 1.7e-21 107.8 275 30.2
BcaB06g26295 Brassica carinata HOM05D010120 ORTHO05D094308 2.2e-21 107.5 129 50.4
BcaB08g35088 Brassica carinata HOM05D009886 ORTHO05D009533 2.9e-21 107.1 83 68.7
BolC9t56682H Brassica oleracea HOM05D007458 ORTHO05D009533 2.9e-21 107.1 170 41.2
BcaB02g11510 Brassica carinata HOM05D007458 ORTHO05D009533 3.8e-21 106.7 188 44.1
BcaB08g35357 Brassica carinata HOM05D007458 ORTHO05D009533 1.4e-20 104.8 189 40.2
BcaB06g26936 Brassica carinata HOM05D007458 ORTHO05D009533 2.4e-20 104.0 218 38.1
BraA07t28408Z Brassica rapa HOM05D007458 ORTHO05D009533 1.2e-19 101.7 123 48.0
BcaB08g35138 Brassica carinata HOM05D007458 ORTHO05D009533 2.7e-19 100.5 186 41.9
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 1.3e-18 98.2 201 33.3
BcaC03g15848 Brassica carinata HOM05D007458 ORTHO05D009533 6.6e-18 95.9 209 33.0
BolC7t43170H Brassica oleracea HOM05D012587 ORTHO05D019916 5.6e-17 92.8 231 33.8
BolC5t32501H Brassica oleracea HOM05D007458 ORTHO05D009533 7.3e-17 92.4 146 44.5
BcaB05g23524 Brassica carinata HOM05D007458 ORTHO05D009533 2.1e-16 90.9 234 33.3
C04p25680 Brassica napus HOM05D007458 ORTHO05D009533 3.1e-15 87.0 103 48.5
C05p50860 Brassica napus HOM05D007458 ORTHO05D009533 3.1e-15 87.0 103 48.5
BolC9t56648H Brassica oleracea HOM05D007458 ORTHO05D016803 5.3e-15 86.3 112 43.8
BolC4t24083H Brassica oleracea HOM05D007458 ORTHO05D016803 6.9e-15 85.9 69 55.1
BraA02t07421Z Brassica rapa HOM05D000826 ORTHO05D040867 9.9e-14 82.0 106 50.9
BraA05t21178Z Brassica rapa HOM05D003835 ORTHO05D004930 1.7e-13 81.3 183 30.6
BcaC07g37431 Brassica carinata HOM05D007458 ORTHO05D009533 2.9e-13 80.5 145 37.2
BcaC07g37469 Brassica carinata HOM05D007458 ORTHO05D009533 4.9e-13 79.7 193 34.2
BcaB06g26962 Brassica carinata HOM05D007458 ORTHO05D009533 9.3e-12 75.5 95 43.2
BcaC06g35833 Brassica carinata HOM05D007458 ORTHO05D009533 9.3e-12 75.5 174 35.1
BcaC03g16530 Brassica carinata HOM05D007458 ORTHO05D009533 3.5e-11 73.6 174 32.2
BcaB02g11307 Brassica carinata HOM05D010120 ORTHO05D092895 4.6e-11 73.2 60 65.0
BcaC05g28700 Brassica carinata HOM05D007458 ORTHO05D009533 1.7e-10 71.2 88 43.2
BcaB07g33148 Brassica carinata HOM05D007458 ORTHO05D009533 1.1e-09 68.6 73 50.7
BcaB02g11513 Brassica carinata HOM05D007458 ORTHO05D009533 1.5e-09 68.2 186 30.6
BcaB06g26788 Brassica carinata HOM05D007458 ORTHO05D009533 1.5e-09 68.2 86 46.5
BcaC04g20906 Brassica carinata HOM05D007458 ORTHO05D009533 3.3e-09 67.0 94 45.7
BcaC09g49674 Brassica carinata HOM05D007458 ORTHO05D009533 4.3e-09 66.6 112 37.5
BraA07t28407Z Brassica rapa HOM05D007458 ORTHO05D016803 4.3e-09 66.6 70 50.0
BcaB01g01731 Brassica carinata HOM05D010120 ORTHO05D093259 5.6e-09 66.2 149 36.9
BcaB05g23615 Brassica carinata HOM05D007458 ORTHO05D009533 5.6e-09 66.2 163 35.6
BcaC04g20873 Brassica carinata HOM05D007458 ORTHO05D009533 9.6e-09 65.5 163 33.1
BcaB04g17718 Brassica carinata HOM05D007458 ORTHO05D009533 1.1e-07 62.0 73 50.7
BcaC01g02142 Brassica carinata HOM05D007458 ORTHO05D009533 1.4e-07 61.6 184 31.0
BcaC01g02125 Brassica carinata HOM05D007458 ORTHO05D009533 3.1e-07 60.5 192 28.6
BcaB05g23475 Brassica carinata HOM05D007458 ORTHO05D009533 4.0e-07 60.1 112 37.5
BcaC06g35661 Brassica carinata HOM05D038213 ORTHO05D009533 5.3e-07 59.7 198 31.8
BcaC04g20664 Brassica carinata HOM05D007458 ORTHO05D009533 9.0e-07 58.9 163 30.1
BolC6t38174H Brassica oleracea HOM05D007458 ORTHO05D009533 9.0e-07 58.9 114 35.1
BcaB02g11022 Brassica carinata HOM05D007458 ORTHO05D009533 4.5e-06 56.6 60 51.7
BcaB02g11312 Brassica carinata HOM05D010120 ORTHO05D009533 5.8e-06 56.2 49 63.3


User provided reference genes

Program Settings