Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 1.7e-125 452.6 218 100.0
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 5.2e-114 414.5 204 96.6
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 5.2e-114 414.5 204 96.6
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.3e-112 409.8 204 95.6
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 2.2e-112 409.1 204 95.6
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 2.2e-112 409.1 204 95.6
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 1.8e-111 406.0 204 93.6
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 2.3e-109 399.1 204 91.7
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 2.9e-109 398.7 204 92.2
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 2.9e-109 398.7 223 88.3
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 5.0e-109 397.9 204 91.7
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 7.3e-108 394.0 204 92.2
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 2.8e-107 392.1 204 91.2
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 8.0e-107 390.6 204 88.7
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 1.2e-99 366.7 205 81.5
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 1.5e-97 359.8 204 79.9
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 3.7e-96 355.1 204 78.4
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 3.7e-96 355.1 204 78.4
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 8.3e-96 354.0 204 79.9
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 1.9e-95 352.8 204 77.9
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 2.4e-95 352.4 204 79.4
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 4.1e-95 351.7 204 78.9
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 4.1e-95 351.7 204 77.9
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 9.2e-95 350.5 204 77.9
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 1.2e-94 350.1 204 77.5
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 1.6e-94 349.7 204 78.4
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 4.6e-94 348.2 204 77.5
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 6.0e-94 347.8 204 78.4
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 1.3e-93 346.7 204 75.0
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 1.3e-93 346.7 204 77.5
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 2.3e-93 345.9 197 79.7
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 5.0e-93 344.7 204 77.0
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 8.6e-93 344.0 204 77.0
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 8.6e-93 344.0 197 78.7
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 1.1e-92 343.6 204 75.0
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 1.1e-92 343.6 204 76.5
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 1.5e-92 343.2 197 79.2
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 4.3e-92 341.7 204 74.5
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 4.3e-92 341.7 212 73.1
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 4.3e-92 341.7 204 74.5
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 5.6e-92 341.3 206 76.7
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 7.3e-92 340.9 204 76.5
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 7.3e-92 340.9 197 78.7
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 9.5e-92 340.5 198 79.8
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 9.5e-92 340.5 198 78.3
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 1.2e-91 340.1 204 75.0
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 1.2e-91 340.1 204 75.0
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 1.2e-91 340.1 198 77.8
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 1.6e-91 339.7 212 73.1
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 3.6e-91 338.6 198 77.3
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 3.6e-91 338.6 204 73.5
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.6e-91 338.6 197 78.2
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 6.2e-91 337.8 204 77.9
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 6.2e-91 337.8 204 73.5
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 1.1e-90 337.0 198 76.8
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.1e-90 337.0 200 77.0
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 1.4e-90 336.7 198 76.3
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.8e-90 336.3 226 71.2
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 3.1e-90 335.5 204 75.0
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 3.1e-90 335.5 229 70.7
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 4.0e-90 335.1 204 75.0
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 8.9e-90 334.0 202 76.7
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 8.9e-90 334.0 202 76.7
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 1.5e-89 333.2 206 74.8
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 3.4e-89 332.0 199 74.4
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 3.7e-88 328.6 198 72.2
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 3.7e-88 328.6 204 71.1
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 3.7e-88 328.6 204 70.6
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 4.9e-88 328.2 198 73.2
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 4.9e-88 328.2 213 72.3
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 1.1e-87 327.0 204 72.1
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 1.1e-87 327.0 198 73.2
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 1.1e-87 327.0 204 70.1
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 1.4e-87 326.6 206 70.4
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 1.4e-87 326.6 204 70.6
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 2.4e-87 325.9 200 72.5
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 9.2e-87 323.9 203 72.9
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 1.2e-86 323.6 216 70.4
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.1e-86 322.8 198 72.2
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 1.3e-85 320.1 209 67.0
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 5.6e-84 314.7 204 69.1
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 7.3e-84 314.3 216 69.4
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 4.7e-83 311.6 199 74.4
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 1.1e-82 310.5 204 68.6
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 3.1e-82 308.9 204 68.6
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.5e-81 306.6 185 76.8
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 2.4e-79 299.3 185 74.6
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 4.1e-79 298.5 204 68.6
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 3.0e-77 292.4 298 52.0
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 4.7e-75 285.0 179 72.6
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 8.1e-75 284.3 179 72.6
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 1.5e-73 280.0 204 65.2
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 8.4e-72 274.2 187 69.0
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 1.7e-69 266.5 204 64.2
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 2.6e-57 226.1 198 55.1
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 3.1e-50 202.6 115 79.1
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 1.2e-49 200.7 194 46.9
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 7.9e-46 188.0 197 43.7
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 1.6e-43 180.3 199 42.2
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 7.6e-41 171.4 105 72.4
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 1.1e-39 167.5 140 67.1
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 1.1e-39 167.5 176 45.5
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 2.9e-32 142.9 197 36.0


User provided reference genes

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