Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33303 Brassica carinata HOM05D004903 ORTHO05D005849 3.6e-149 531.6 269 100.0
BraA06t23313Z Brassica rapa HOM05D004903 ORTHO05D005849 4.7e-141 504.6 269 95.2
A06p00790 Brassica napus HOM05D004903 ORTHO05D005849 2.3e-140 502.3 269 94.8
BcaC08g43554 Brassica carinata HOM05D004903 ORTHO05D005849 4.0e-140 501.5 269 94.4
C06p09540 Brassica napus HOM05D004903 ORTHO05D005849 2.6e-139 498.8 269 94.8
BolC6t36028H Brassica oleracea HOM05D004903 ORTHO05D005849 2.6e-139 498.8 269 94.8
A05p17920 Brassica napus HOM05D004903 ORTHO05D005849 2.7e-128 462.2 269 88.8
BraA05t20686Z Brassica rapa HOM05D004903 ORTHO05D005849 7.8e-128 460.7 269 88.5
BcaB02g10893 Brassica carinata HOM05D004903 ORTHO05D005849 6.6e-127 457.6 269 87.0
CARHR044070 Cardamine hirsuta HOM05D004903 ORTHO05D005849 8.6e-127 457.2 280 83.6
BcaC08g44129 Brassica carinata HOM05D004903 ORTHO05D005849 4.0e-124 448.4 270 87.0
C06p15280 Brassica napus HOM05D004903 ORTHO05D005849 4.0e-124 448.4 270 87.0
Thhalv10011709m.g Eutrema salsugineum HOM05D004903 ORTHO05D005849 8.9e-124 447.2 275 84.0
BolC6t36703H Brassica oleracea HOM05D004903 ORTHO05D005849 2.6e-123 445.7 270 86.3
AT1G53760 Arabidopsis thaliana HOM05D004903 ORTHO05D005849 3.4e-123 445.3 273 82.8
Sp1g40280 Schrenkiella parvula HOM05D004903 ORTHO05D005849 1.9e-121 439.5 273 83.5
AL1G62450 Arabidopsis lyrata HOM05D004903 ORTHO05D005849 4.1e-121 438.3 272 82.4
Carub.0001s4303 Capsella rubella HOM05D004903 ORTHO05D005849 1.4e-116 423.3 273 79.5
THA.LOC104810400 Tarenaya hassleriana HOM05D004903 ORTHO05D005849 3.2e-105 385.6 269 73.2
Aa31LG10G1530 Aethionema arabicum HOM05D000070 ORTHO05D003301 1.9e-102 376.3 247 78.9
Thecc.06G131400 Theobroma cacao HOM05D004903 ORTHO05D005849 9.0e-92 340.9 278 63.3
Duzib160G0805 Durio zibethinus HOM05D004903 ORTHO05D005849 2.6e-91 339.3 278 63.7
Gohir.D06G202400 Gossypium hirsutum HOM05D004903 ORTHO05D005849 7.6e-91 337.8 270 65.6
Gorai.010G236300 Gossypium raimondii HOM05D004903 ORTHO05D005849 7.6e-91 337.8 270 65.6
COL.COLO4_30880 Corchorus olitorius HOM05D004903 ORTHO05D005849 3.5e-88 328.9 219 74.4
EL10Ac7g18248 Beta vulgaris HOM05D004903 ORTHO05D005849 7.9e-88 327.8 268 63.8
TAR624G0709 Trochodendron aralioides HOM05D004903 ORTHO05D005849 7.9e-88 327.8 276 60.9
Gohir.A06G194700 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.3e-87 327.0 270 64.4
Atru.chr1.4170 Acer truncatum HOM05D004903 ORTHO05D005849 1.8e-87 326.6 275 62.2
Gohir.A06G142500 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.8e-87 326.6 278 62.9
Gorai.010G172600 Gossypium raimondii HOM05D004903 ORTHO05D005849 1.8e-87 326.6 278 62.9
GSVIVG01016657001 Vitis vinifera HOM05D004903 ORTHO05D005849 2.3e-87 326.2 267 62.5
PGSC0003DMG400004869 Solanum tuberosum HOM05D004903 ORTHO05D005849 2.5e-86 322.8 274 61.3
Manes.11G011500 Manihot esculenta HOM05D004903 ORTHO05D005849 4.3e-86 322.0 273 61.5
Ciclev10026250m.g Citrus clementina HOM05D004903 ORTHO05D005849 2.1e-85 319.7 277 59.9
RcHm_v2.0_Chr2g0148141 Rosa chinensis HOM05D004903 ORTHO05D005849 2.1e-85 319.7 284 61.3
CAN.G1633.2 Capsicum annuum HOM05D004903 ORTHO05D005849 2.8e-85 319.3 276 60.5
CiPaw.01G210600 Carya illinoinensis HOM05D004903 ORTHO05D005849 2.8e-85 319.3 275 61.8
MD09G1171800 Malus domestica HOM05D004903 ORTHO05D005849 4.8e-85 318.5 278 61.2
Hund18627 Selenicereus undatus HOM05D004903 ORTHO05D005849 4.8e-85 318.5 272 59.2
Prupe.3G030200 Prunus persica HOM05D004903 ORTHO05D005849 6.2e-85 318.2 273 60.8
AUR62001391 Chenopodium quinoa HOM05D004903 ORTHO05D005849 1.1e-84 317.4 270 60.7
ClCG09G001430 Citrullus lanatus HOM05D004903 ORTHO05D005849 1.8e-84 316.6 278 59.7
Solyc06g063130.3 Solanum lycopersicum HOM05D004903 ORTHO05D005849 1.8e-84 316.6 274 60.2
Dinv20374 Davidia involucrata HOM05D004903 ORTHO05D005849 2.4e-84 316.2 277 59.6
MD17G1155200 Malus domestica HOM05D004903 ORTHO05D005849 2.4e-84 316.2 279 59.9
Potri.001G161800 Populus trichocarpa HOM05D004903 ORTHO05D005849 2.4e-84 316.2 278 59.7
QL05p000658 Quercus lobata HOM05D004903 ORTHO05D005849 2.4e-84 316.2 275 61.1
QL05p000751 Quercus lobata HOM05D004903 ORTHO05D005849 4.0e-84 315.5 271 61.3
FAN09G2808 Fragaria x ananassa HOM05D004903 ORTHO05D005849 6.9e-84 314.7 279 59.9
TWI59G0350 Tripterygium wilfordii HOM05D004903 ORTHO05D005849 9.0e-84 314.3 285 58.9
FAN14G1686 Fragaria x ananassa HOM05D004903 ORTHO05D005849 2.0e-83 313.2 279 60.2
CsaV3_7G033900 Cucumis sativus L. HOM05D004903 ORTHO05D005849 3.4e-83 312.4 278 58.3
Lj3g0025901 Lotus japonicus HOM05D004903 ORTHO05D005849 3.4e-83 312.4 273 57.9
Nn8g38503 Nelumbo nucifera HOM05D004903 ORTHO05D005849 3.4e-83 312.4 273 59.3
Nitab4.5_0006190g0020 Nicotiana tabacum HOM05D004903 ORTHO05D005849 3.4e-83 312.4 272 59.9
Sopen06g022580 Solanum pennellii HOM05D004903 ORTHO05D005849 4.5e-83 312.0 274 59.5
Actinidia25997 Actinidia chinensis HOM05D004903 ORTHO05D005849 5.8e-83 311.6 276 59.4
FAN02G0327 Fragaria x ananassa HOM05D004903 ORTHO05D005849 1.0e-82 310.8 275 61.1
FAN14G0435 Fragaria x ananassa HOM05D004903 ORTHO05D005849 1.0e-82 310.8 275 60.4
FvH4_6g36070 Fragaria vesca HOM05D004903 ORTHO05D005849 2.2e-82 309.7 281 58.7
Lalb_Chr17g0343171 Lupinus albus HOM05D004903 ORTHO05D005849 2.2e-82 309.7 268 56.7
CSS0022789 Camellia sinensis var. sinensis HOM05D004903 ORTHO05D005849 2.9e-82 309.3 274 60.2
Glyma.16G015600 Glycine max HOM05D004903 ORTHO05D005849 3.8e-82 308.9 272 58.1
CANSAT56G0172 Cannabis sativa HOM05D004903 ORTHO05D005849 1.9e-81 306.6 271 57.9
Peaxi162Scf00207g01534 Petunia axillaris HOM05D004903 ORTHO05D005849 4.2e-81 305.4 273 58.2
Glyma.07G046600 Glycine max HOM05D004903 ORTHO05D005849 2.1e-80 303.1 273 55.3
PSO135G0609 Papaver somniferum HOM05D004903 ORTHO05D005849 4.6e-80 302.0 267 57.7
HanXRQChr12g0360041 Helianthus annuus HOM05D004903 ORTHO05D005849 1.0e-79 300.8 268 59.3
PSO724G0850 Papaver somniferum HOM05D004903 ORTHO05D005849 1.0e-79 300.8 267 57.7
Cpa.g.sc25.203 Carica papaya HOM05D004903 ORTHO05D005849 1.8e-79 300.1 185 78.4
Eucgr.J02586 Eucalyptus grandis HOM05D004903 ORTHO05D005849 3.0e-79 299.3 274 59.5
DCAR_022636 Daucus carota HOM05D004903 ORTHO05D005849 1.5e-78 297.0 276 56.5
arahy.Tifrunner.gnm1.ann1.97GHXX Arachis hypogaea HOM05D004903 ORTHO05D005849 1.9e-78 296.6 272 57.4
Migut.I01143 Erythranthe guttata HOM05D004903 ORTHO05D005849 1.9e-78 296.6 273 56.8
Sed0027894 Sechium edule HOM05D004903 ORTHO05D005849 9.6e-78 294.3 280 56.1
Actinidia24416 Actinidia chinensis HOM05D004903 ORTHO05D005849 1.3e-77 293.9 282 55.7
Psat4g164720 Pisum sativum HOM05D004903 ORTHO05D005849 1.3e-77 293.9 272 53.7
arahy.Tifrunner.gnm1.ann1.HDKQ14 Arachis hypogaea HOM05D004903 ORTHO05D005849 1.1e-76 290.8 292 55.1
Aqoxy7G00919 Aquilegia oxysepala HOM05D004903 ORTHO05D005849 3.1e-76 289.3 285 54.0
Nitab4.5_0010570g0050 Nicotiana tabacum HOM05D004903 ORTHO05D005849 3.1e-76 289.3 268 58.2
Lsat_1_v5_gn_5_137641 Lactuca sativa HOM05D004903 ORTHO05D005849 4.1e-76 288.9 261 57.1
Sc12g0011010 Simmondsia chinensis HOM05D004903 ORTHO05D005849 4.1e-76 288.9 222 64.0
Phvul.010G122300 Phaseolus vulgaris HOM05D004903 ORTHO05D005849 5.3e-76 288.5 275 53.8
SalBow6G3230 Salvia bowleyana HOM05D004903 ORTHO05D005849 1.2e-75 287.3 272 54.8
Medtr8g023500 Medicago truncatula HOM05D004903 ORTHO05D005849 1.0e-74 284.3 279 52.7
Gorai.011G054300 Gossypium raimondii HOM05D004903 ORTHO05D005849 1.3e-74 283.9 222 63.5
Rhsim08G0245600 Rhododendron simsii HOM05D004903 ORTHO05D005849 1.7e-74 283.5 236 61.4
vmacro18714 Vaccinium macrocarpon HOM05D004903 ORTHO05D005849 1.7e-74 283.5 275 55.3
arahy.Tifrunner.gnm1.ann1.3XU7EE Arachis hypogaea HOM05D004903 ORTHO05D005849 3.8e-74 282.3 271 56.1
Zm00001eb207930 Zea mays HOM05D004903 ORTHO05D005849 8.5e-74 281.2 272 54.0
arahy.Tifrunner.gnm1.ann1.M9BVNS Arachis hypogaea HOM05D004903 ORTHO05D005849 1.1e-73 280.8 272 55.5
MSTRG.10905 Avicennia marina HOM05D004903 ORTHO05D005849 1.9e-73 280.0 284 52.8
Lj5A28T47 Lonicera japonica HOM05D004903 ORTHO05D005849 2.5e-73 279.6 330 49.4
arahy.Tifrunner.gnm1.ann1.AA2XIP Arachis hypogaea HOM05D004903 ORTHO05D005849 9.3e-73 277.7 275 53.8
HPP92_000828 Vanilla planifolia HOM05D004903 ORTHO05D005849 2.1e-72 276.6 265 54.0
Cc04_g00600 Coffea canephora HOM05D004903 ORTHO05D005849 4.6e-72 275.4 279 53.4
arahy.Tifrunner.gnm1.ann1.ZQ2A8X Arachis hypogaea HOM05D004903 ORTHO05D005849 7.9e-72 274.6 292 52.1
SGA_v2.0_scaffold71G23946 Striga asiatica HOM05D004903 ORTHO05D005849 7.9e-72 274.6 280 55.0
Sabra03G0044200 Salix brachista HOM05D004903 ORTHO05D005849 1.1e-70 270.8 305 50.8
arahy.Tifrunner.gnm1.ann1.5Z4EMJ Arachis hypogaea HOM05D004903 ORTHO05D005849 1.9e-70 270.0 268 53.7
ATR0006G080 Amborella trichopoda HOM05D004903 ORTHO05D005849 7.4e-70 268.1 264 51.5
Ca_23466_v3 Cicer arietinum L. HOM05D004903 ORTHO05D005849 7.4e-70 268.1 225 59.1
MELO3C024303.2 Cucumis melo HOM05D004903 ORTHO05D005849 2.2e-69 266.5 193 66.3
MBI17_g12875_MAGBIO Magnolia biondii HOM05D004903 ORTHO05D005849 3.7e-69 265.8 269 49.8
AUR62025608 Chenopodium quinoa HOM05D004903 ORTHO05D005849 4.8e-69 265.4 255 56.9
Hma1.2p1_1999F.1_g310500 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 4.8e-69 265.4 184 69.0
Os02g0152600 Oryza sativa ssp. japonica HOM05D004903 ORTHO05D005849 4.8e-69 265.4 280 50.7
TPR.G15248 Trifolium pratense HOM05D004903 ORTHO05D005849 5.3e-68 261.9 219 58.9
VMungo0331G0875 Vigna mungo HOM05D004903 ORTHO05D005849 1.2e-67 260.8 226 59.7
Sabra01G0130700 Salix brachista HOM05D004903 ORTHO05D005849 2.6e-67 259.6 294 52.0
unitig_32.g11002 Utricularia gibba HOM05D004903 ORTHO05D005849 1.0e-66 257.7 278 49.3
Gohir.A10G050050 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.4e-65 253.8 258 55.0
Cfa003452 Carpinus fangiana HOM05D004903 ORTHO05D005849 3.0e-63 246.1 206 64.6
Oeu053414.1 Olea europaea HOM05D004903 ORTHO05D005849 5.1e-63 245.4 233 53.2
ECA234G0009 Erigeron canadensis HOM05D004903 ORTHO05D005849 2.6e-62 243.0 215 58.1
Oeu019513.1 Olea europaea HOM05D004903 ORTHO05D005849 1.2e-59 234.2 190 59.5
Dinv37814 Davidia involucrata HOM05D004903 ORTHO05D005849 1.5e-59 233.8 208 59.1
CDE06G0378 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 1.1e-57 227.6 194 55.7
CDE04G1042 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 4.7e-56 222.2 194 56.2
Sed0021101 Sechium edule HOM05D004903 ORTHO05D005849 7.9e-56 221.5 208 57.7
Gohir.D10G050650 Gossypium hirsutum HOM05D004903 ORTHO05D005849 3.0e-55 219.5 161 65.2
BcaB02g07096 Brassica carinata HOM05D000219 ORTHO05D000226 2.0e-54 216.9 112 94.6
BcaB07g32153 Brassica carinata HOM05D004903 ORTHO05D005849 2.8e-53 213.0 116 90.5
Hma1.2p1_0090F.1_g045680 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 7.0e-52 208.4 214 53.3
Actinidia31143 Actinidia chinensis HOM05D004903 ORTHO05D005849 7.7e-51 204.9 212 52.8
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 4.7e-48 195.7 228 52.2
Mapoly0021s0048 Marchantia polymorpha HOM05D004903 ORTHO05D005849 1.6e-43 180.6 282 38.3
AagrBONN_evm.TU.Sc2ySwM_228.2429 Anthoceros agrestis HOM05D004903 ORTHO05D005849 3.2e-41 172.9 215 41.9
Gohir.D06G148232 Gossypium hirsutum HOM05D004903 ORTHO05D005849 2.7e-40 169.9 112 73.2
CBR_g34164 Chara braunii HOM05D004903 ORTHO05D005849 4.5e-35 152.5 202 38.1
Haze_16148 Corylus avellana HOM05D003205 ORTHO05D003746 5.2e-31 139.0 191 47.1
Haze_16144 Corylus avellana HOM05D003205 ORTHO05D003746 3.4e-30 136.3 191 46.6
arahy.Tifrunner.gnm1.ann1.AT31DH Arachis hypogaea HOM05D004903 ORTHO05D005849 8.3e-29 131.7 96 66.7
Pp3c13_9790 Physcomitrium patens HOM05D004903 ORTHO05D005849 1.1e-28 131.3 266 32.0
arahy.Tifrunner.gnm1.ann1.RS9BE1 Arachis hypogaea HOM05D004903 ORTHO05D005849 1.4e-28 131.0 96 66.7
Gohir.D02G109866 Gossypium hirsutum HOM05D004903 ORTHO05D005849 9.5e-25 118.2 84 64.3
SEGI_28585 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 3.2e-20 103.2 122 44.3
SEGI_38260 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 3.2e-20 103.2 131 42.7
CDE06G0441 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 1.6e-19 100.9 91 52.7
Cre08.g358557 Chlamydomonas reinhardtii HOM05D004903 ORTHO05D005849 5.2e-15 85.9 211 26.5
Hma1.2p1_0090F.1_g045690 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 8.9e-15 85.1 69 58.0
PRCOL_00005128 Prasinoderma coloniale HOM05D004903 ORTHO05D005849 1.9e-12 77.4 280 28.2
TPR.G26438 Trifolium pratense HOM05D004903 ORTHO05D005849 1.2e-11 74.7 71 45.1
Cpa.g.sc25.204 Carica papaya HOM05D004903 ORTHO05D005849 2.3e-10 70.5 106 42.5
Duzib192G1079 Durio zibethinus HOM05D004903 ORTHO05D005849 2.3e-10 70.5 207 31.9
Glyma.16G014900 Glycine max HOM05D004903 ORTHO05D005849 1.6e-08 64.3 94 40.4
arahy.Tifrunner.gnm1.ann1.1E2DFU Arachis hypogaea HOM05D001485 ORTHO05D005849 2.1e-08 63.9 48 70.8
Actinidia21845 Actinidia chinensis HOM05D004903 ORTHO05D005849 6.2e-08 62.4 44 65.9
MBI17_g12881_MAGBIO Magnolia biondii HOM05D007686 ORTHO05D009709 1.8e-07 60.8 56 53.6
MCO07G235 Micromonas commoda HOM05D004903 ORTHO05D005849 6.8e-07 58.9 189 24.9
arahy.Tifrunner.gnm1.ann1.ZRCJ38 Arachis hypogaea HOM05D004903 ORTHO05D005849 9.9e-06 55.1 64 53.1


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