Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33236 Brassica carinata HOM05D034447 ORTHO05D021583 1.1e-156 556.6 271 100.0
BcaB04g18465 Brassica carinata HOM05D034447 ORTHO05D021583 2.4e-44 183.3 237 46.8
BcaB06g27133 Brassica carinata HOM05D034447 ORTHO05D021583 5.8e-22 109.0 58 89.7
A09p46540 Brassica napus HOM05D000999 ORTHO05D000961 6.0e-11 72.4 78 55.1
Sp5g08800 Schrenkiella parvula HOM05D000999 ORTHO05D000961 6.0e-11 72.4 68 58.8
BraA09t40119Z Brassica rapa HOM05D000999 ORTHO05D000961 7.8e-11 72.0 79 54.4
BcaB01g00266 Brassica carinata HOM05D000999 ORTHO05D000961 2.3e-10 70.5 117 40.2
C02p35780 Brassica napus HOM05D016228 ORTHO05D022029 3.9e-10 69.7 78 51.3
BcaC03g14692 Brassica carinata HOM05D000313 ORTHO05D000065 6.6e-10 68.9 93 47.3
BcaC04g22409 Brassica carinata HOM05D005044 ORTHO05D000065 6.6e-10 68.9 93 47.3
Carub.0005s2011 Capsella rubella HOM05D000999 ORTHO05D000961 6.6e-10 68.9 114 45.6
C05p00200 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-09 68.2 77 51.9
C06p47470 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-09 68.2 77 51.9
C07p05180 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-09 68.2 77 51.9
BraA08t32937Z Brassica rapa HOM05D000313 ORTHO05D000065 1.1e-09 68.2 77 51.9
BolC6t37005H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-09 67.8 79 50.6
Aa31LG10G9590 Aethionema arabicum HOM05D000999 ORTHO05D000961 4.3e-09 66.2 91 44.0
AT3G53530 Arabidopsis thaliana HOM05D000999 ORTHO05D000961 4.3e-09 66.2 100 45.0
BcaC07g39715 Brassica carinata HOM05D000999 ORTHO05D000961 5.6e-09 65.9 78 50.0
C08p28870 Brassica napus HOM05D000999 ORTHO05D000961 5.6e-09 65.9 78 50.0
BolC8t50489H Brassica oleracea HOM05D000999 ORTHO05D000961 5.6e-09 65.9 78 50.0
A09p35480 Brassica napus HOM05D000305 ORTHO05D000065 7.3e-09 65.5 81 48.1
BcaB05g24149 Brassica carinata HOM05D000313 ORTHO05D000065 9.6e-09 65.1 83 47.0
BcaB07g33009 Brassica carinata HOM05D000313 ORTHO05D000065 9.6e-09 65.1 73 49.3
C04p53440 Brassica napus HOM05D000313 ORTHO05D000065 9.6e-09 65.1 94 41.5
BolC4t26899H Brassica oleracea HOM05D000313 ORTHO05D000065 9.6e-09 65.1 94 41.5
BolC6t36657H Brassica oleracea HOM05D000305 ORTHO05D000065 9.6e-09 65.1 81 49.4
BolC9t54870H Brassica oleracea HOM05D000313 ORTHO05D000065 9.6e-09 65.1 85 47.1
Thhalv10010661m.g Eutrema salsugineum HOM05D000999 ORTHO05D000961 9.6e-09 65.1 120 41.7
BcaB04g17642 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-08 64.7 104 39.4
BcaB07g32488 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-08 64.3 70 52.9
BolC3t15032H Brassica oleracea HOM05D000305 ORTHO05D000065 1.6e-08 64.3 83 45.8
BraA09t40035Z Brassica rapa HOM05D000313 ORTHO05D000065 1.6e-08 64.3 94 41.5
AL5G34450 Arabidopsis lyrata HOM05D000999 ORTHO05D000961 2.1e-08 63.9 116 42.2
BraA05t19977Z Brassica rapa HOM05D000313 ORTHO05D000065 2.1e-08 63.9 73 50.7
BolC6t37050H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-08 63.2 83 44.6
BraA06t24994Z Brassica rapa HOM05D035275 ORTHO05D021583 3.6e-08 63.2 50 58.0
A10p33690 Brassica napus HOM05D000313 ORTHO05D000065 4.8e-08 62.8 81 44.4
CARHR163440 Cardamine hirsuta HOM05D000999 ORTHO05D000961 4.8e-08 62.8 114 43.0
C03p67840 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-08 62.4 93 44.1
C05p31210 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-08 62.4 93 39.8
BolSC21t60252H Brassica oleracea HOM05D000313 ORTHO05D000065 6.2e-08 62.4 93 44.1
BraA07t29853Z Brassica rapa HOM05D000999 ORTHO05D000961 6.2e-08 62.4 110 43.6
BcaB02g06416 Brassica carinata HOM05D000313 ORTHO05D000065 8.1e-08 62.0 81 45.7
BcaB05g24332 Brassica carinata HOM05D000313 ORTHO05D000065 8.1e-08 62.0 77 48.1
BcaC04g18697 Brassica carinata HOM05D000313 ORTHO05D000065 8.1e-08 62.0 74 48.6
A07p21710 Brassica napus HOM05D000999 ORTHO05D000961 8.1e-08 62.0 111 43.2
A09p30460 Brassica napus HOM05D000305 ORTHO05D000065 8.1e-08 62.0 81 46.9
BolC2t08209H Brassica oleracea HOM05D000313 ORTHO05D000065 8.1e-08 62.0 87 42.5
BolC2t10493H Brassica oleracea HOM05D000313 ORTHO05D000065 8.1e-08 62.0 94 40.4
BcaB01g04686 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-07 61.6 72 48.6
BcaB02g07778 Brassica carinata HOM05D000999 ORTHO05D000961 1.1e-07 61.6 68 51.5
C02p20670 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-07 61.6 87 42.5
A06p19110 Brassica napus HOM05D035275 ORTHO05D021583 1.8e-07 60.8 50 56.0
BolC7t45455H Brassica oleracea HOM05D000313 ORTHO05D000065 1.8e-07 60.8 81 46.9
BraA09t38616Z Brassica rapa HOM05D000305 ORTHO05D000065 1.8e-07 60.8 72 48.6
C04p39840 Brassica napus HOM05D000313 ORTHO05D013032 3.1e-07 60.1 74 52.7
BolC6t37332H Brassica oleracea HOM05D000999 ORTHO05D000961 4.0e-07 59.7 110 42.7
BcaC03g16108 Brassica carinata HOM05D000313 ORTHO05D000065 6.9e-07 58.9 74 45.9
C01p21550 Brassica napus HOM05D000313 ORTHO05D000065 6.9e-07 58.9 72 50.0
C09p19680 Brassica napus HOM05D000313 ORTHO05D013032 6.9e-07 58.9 65 50.8
BolC1t02075H Brassica oleracea HOM05D000313 ORTHO05D000065 6.9e-07 58.9 72 50.0
BolC3t15057H Brassica oleracea HOM05D000313 ORTHO05D000065 6.9e-07 58.9 80 48.8
BolC4t25557H Brassica oleracea HOM05D000313 ORTHO05D000065 6.9e-07 58.9 74 51.4
BolC5t31140H Brassica oleracea HOM05D000313 ORTHO05D000065 6.9e-07 58.9 50 52.0
BolC5t30813H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-06 58.2 41 58.5
A09p51680 Brassica napus HOM05D000313 ORTHO05D013032 1.5e-06 57.8 74 50.0
C08p04870 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-06 57.8 83 43.4
BolC6t37857H Brassica oleracea HOM05D000313 ORTHO05D013032 1.5e-06 57.8 63 47.6
C09p55240 Brassica napus HOM05D000305 ORTHO05D000065 2.0e-06 57.4 47 55.3
C08p01640 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-06 57.0 73 49.3
BcaC01g02207 Brassica carinata HOM05D000313 ORTHO05D009979 3.4e-06 56.6 85 42.4
C06p02130 Brassica napus HOM05D018440 ORTHO05D021790 4.5e-06 56.2 28 89.3
BcaB08g35651 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-06 55.8 40 60.0
C06p21500 Brassica napus HOM05D000999 ORTHO05D000961 5.8e-06 55.8 122 41.0
BcaC08g43795 Brassica carinata HOM05D000313 ORTHO05D021935 7.6e-06 55.5 54 46.3
BcaC08g44632 Brassica carinata HOM05D000999 ORTHO05D000961 7.6e-06 55.5 110 40.9
A09p30430 Brassica napus HOM05D000313 ORTHO05D013032 7.6e-06 55.5 71 45.1
C06p11720 Brassica napus HOM05D000313 ORTHO05D000065 7.6e-06 55.5 54 48.1
Thhalv10005358m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 7.6e-06 55.5 55 45.5
C04p23330 Brassica napus HOM05D000313 ORTHO05D000065 9.9e-06 55.1 77 42.9
C06p14790 Brassica napus HOM05D000305 ORTHO05D000065 9.9e-06 55.1 47 53.2
C08p06840 Brassica napus HOM05D000280 ORTHO05D003998 9.9e-06 55.1 49 44.9


User provided reference genes

Program Settings