Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33224 Brassica carinata HOM05D000675 ORTHO05D002086 5.0e-24 113.6 58 100.0
BcaB06g27187 Brassica carinata HOM05D000675 ORTHO05D002086 9.5e-15 82.8 50 80.0
BcaB05g24191 Brassica carinata HOM05D000675 ORTHO05D002086 5.8e-12 73.6 49 73.5
BcaC04g22824 Brassica carinata HOM05D000675 ORTHO05D002086 3.7e-11 70.9 49 65.3
BolC4t25850H Brassica oleracea HOM05D000675 ORTHO05D002086 4.9e-11 70.5 49 65.3
BcaC03g15594 Brassica carinata HOM05D000675 ORTHO05D002086 6.4e-11 70.1 49 65.3
BcaC05g27596 Brassica carinata HOM05D000675 ORTHO05D002086 3.2e-10 67.8 49 63.3
BcaC03g16749 Brassica carinata HOM05D000675 ORTHO05D002086 4.1e-10 67.4 49 61.2
BcaC05g25703 Brassica carinata HOM05D000675 ORTHO05D002086 7.1e-10 66.6 49 61.2
BcaC08g42855 Brassica carinata HOM05D000675 ORTHO05D002086 7.1e-10 66.6 49 61.2
BcaC05g28481 Brassica carinata HOM05D000675 ORTHO05D002086 9.2e-10 66.2 49 61.2
BcaC09g48980 Brassica carinata HOM05D000675 ORTHO05D002086 2.7e-09 64.7 49 59.2
BcaC09g48982 Brassica carinata HOM05D000675 ORTHO05D002086 2.7e-09 64.7 49 59.2
BcaC08g44362 Brassica carinata HOM05D000675 ORTHO05D002086 6.0e-09 63.5 49 59.2
BcaB03g14368 Brassica carinata HOM05D000675 ORTHO05D002086 7.8e-09 63.2 49 59.2
BcaC05g28255 Brassica carinata HOM05D000675 ORTHO05D002086 7.8e-09 63.2 49 59.2
BcaC06g34450 Brassica carinata HOM05D000675 ORTHO05D002086 7.8e-09 63.2 43 67.4
BcaC06g36214 Brassica carinata HOM05D000675 ORTHO05D002086 7.8e-09 63.2 49 59.2
BcaC09g49807 Brassica carinata HOM05D000675 ORTHO05D002086 7.8e-09 63.2 49 59.2
BcaC01g02708 Brassica carinata HOM05D000977 ORTHO05D001094 1.0e-08 62.8 43 65.1
BcaC02g11404 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-08 62.4 49 59.2
BcaC03g16220 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-08 62.0 49 57.1
BcaC07g36914 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-08 62.0 49 59.2
BolC5t32182H Brassica oleracea HOM05D000675 ORTHO05D002086 2.3e-08 61.6 49 59.2
BcaC05g27351 Brassica carinata HOM05D000675 ORTHO05D002086 3.0e-08 61.2 45 60.0
BcaC05g28779 Brassica carinata HOM05D000977 ORTHO05D001094 3.0e-08 61.2 56 55.4
BcaC06g35605 Brassica carinata HOM05D000675 ORTHO05D002086 3.9e-08 60.8 43 67.4
BcaB01g03291 Brassica carinata HOM05D000675 ORTHO05D002086 6.6e-08 60.1 45 60.0
BcaB07g32893 Brassica carinata HOM05D000675 ORTHO05D002086 8.6e-08 59.7 49 55.1
BcaC09g50385 Brassica carinata HOM05D000675 ORTHO05D002086 8.6e-08 59.7 49 55.1
BcaB03g15222 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-07 58.9 45 57.8
BcaB04g17253 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-07 58.9 45 57.8
BolC6t36479H Brassica oleracea HOM05D000977 ORTHO05D001094 1.5e-07 58.9 43 60.5
BcaB05g21895 Brassica carinata HOM05D000675 ORTHO05D002086 1.9e-07 58.5 45 57.8
BcaB05g22219 Brassica carinata HOM05D000675 ORTHO05D002086 1.9e-07 58.5 45 57.8
BcaC05g29029 Brassica carinata HOM05D000675 ORTHO05D002086 1.9e-07 58.5 49 53.1
C06p04090 Brassica napus HOM05D000675 ORTHO05D023943 1.9e-07 58.5 43 60.5
C06p04160 Brassica napus HOM05D000977 ORTHO05D001094 1.9e-07 58.5 43 60.5
BcaB08g35730 Brassica carinata HOM05D000675 ORTHO05D002086 4.3e-07 57.4 45 57.8
BcaC03g17205 Brassica carinata HOM05D000675 ORTHO05D002086 7.3e-07 56.6 43 62.8
BolC2t11221H Brassica oleracea HOM05D000675 ORTHO05D002086 7.3e-07 56.6 43 62.8
BcaC03g17964 Brassica carinata HOM05D000675 ORTHO05D023943 1.6e-06 55.5 43 58.1
BcaC08g43134 Brassica carinata HOM05D000675 ORTHO05D023943 3.6e-06 54.3 43 55.8
BcaC05g26255 Brassica carinata HOM05D000675 ORTHO05D002086 6.2e-06 53.5 49 53.1


User provided reference genes

Program Settings