Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33221 Brassica carinata HOM05D048909 ORTHO05D000065 9.4e-209 729.9 369 100.0
BcaB07g32469 Brassica carinata HOM05D048909 ORTHO05D093107 1.7e-24 117.9 102 66.7
Thhalv10002234m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 4.6e-14 83.2 92 50.0
C04p06280 Brassica napus HOM05D000313 ORTHO05D000065 6.1e-14 82.8 92 51.1
BcaC07g36843 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-13 80.9 92 48.9
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 3.9e-13 80.1 92 48.9
BcaC06g36574 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-11 72.8 79 49.4
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-11 72.8 83 49.4
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 8.2e-11 72.4 83 49.4
C07p02730 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-10 72.0 79 49.4
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-10 70.9 92 40.2
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-10 70.1 92 40.2
A09p47000 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-10 70.1 92 40.2
C04p33330 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-10 70.1 125 35.2
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 4.1e-10 70.1 92 40.2
C08p27740 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-09 68.6 92 40.2
C08p02170 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-09 68.2 77 46.8
BraA07t30966Z Brassica rapa HOM05D000313 ORTHO05D000065 1.5e-09 68.2 76 51.3
C05p31010 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-09 67.4 93 39.8
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-09 67.0 92 43.5
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 3.4e-09 67.0 92 43.5
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 4.5e-09 66.6 92 40.2
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-09 66.6 170 33.5
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-09 66.6 170 33.5
BolC2t09876H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-09 66.6 75 45.3
C02p32630 Brassica napus HOM05D000313 ORTHO05D000065 7.7e-09 65.9 78 47.4
BolC7t42461H Brassica oleracea HOM05D000313 ORTHO05D000065 7.7e-09 65.9 90 44.4
C09p17240 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-08 65.5 90 44.4
Thhalv10005644m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 1.3e-08 65.1 80 43.8
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-08 64.7 108 40.7
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-08 64.3 92 41.3
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-08 64.3 101 39.6
BolC6t36221H Brassica oleracea HOM05D000313 ORTHO05D000065 2.9e-08 63.9 103 34.0
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-08 63.5 101 39.6
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-08 63.5 127 33.1
C02p40980 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-08 63.2 92 40.2
C04p18340 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-08 63.2 101 38.6
BolC9t54626H Brassica oleracea HOM05D000313 ORTHO05D000065 5.0e-08 63.2 75 54.7
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 5.0e-08 63.2 92 37.0
C04p21440 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-08 62.8 92 39.1
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-08 62.8 92 38.0
BcaC07g39432 Brassica carinata HOM05D010481 ORTHO05D017627 8.5e-08 62.4 73 49.3
A07p36100 Brassica napus HOM05D000313 ORTHO05D000065 8.5e-08 62.4 129 32.6
A09p22770 Brassica napus HOM05D000313 ORTHO05D000065 8.5e-08 62.4 90 36.7
C07p19990 Brassica napus HOM05D010481 ORTHO05D017627 8.5e-08 62.4 73 49.3
C08p24710 Brassica napus HOM05D010481 ORTHO05D017627 8.5e-08 62.4 73 49.3
BolC7t42518H Brassica oleracea HOM05D010481 ORTHO05D017627 8.5e-08 62.4 73 49.3
BolC8t50085H Brassica oleracea HOM05D010481 ORTHO05D017627 8.5e-08 62.4 101 41.6
BcaC05g25841 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-07 62.0 92 39.1
BcaC08g44549 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-07 62.0 92 37.0
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 1.1e-07 62.0 129 34.1
BcaB04g17117 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-07 61.6 87 37.9
BcaB06g26638 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-07 61.6 79 43.0
BcaC04g18606 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-07 61.2 129 33.3
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-07 61.2 129 30.2
C07p23090 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-07 61.2 78 48.7
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-07 61.2 92 35.9
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-07 61.2 90 36.7
BcaB02g10989 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-07 60.8 81 40.7
BcaC02g10550 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-07 60.8 144 38.2
BcaC07g37400 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-07 60.8 98 38.8
A05p21270 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-07 60.8 92 37.0
BolC2t10736H Brassica oleracea HOM05D010481 ORTHO05D017627 2.5e-07 60.8 97 42.3
BraA05t21034Z Brassica rapa HOM05D000313 ORTHO05D000065 2.5e-07 60.8 92 37.0
BcaC02g07753 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-07 60.5 97 39.2
C08p08710 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-07 60.5 88 39.8
C09p57200 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-07 60.5 92 41.3
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 3.2e-07 60.5 129 33.3
BcaC06g35177 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-07 60.1 92 37.0
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-07 60.1 92 39.1
A03p61810 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-07 60.1 77 41.6
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-07 60.1 92 39.1
C03p81680 Brassica napus HOM05D010481 ORTHO05D032805 4.2e-07 60.1 59 52.5
BolC3t16353H Brassica oleracea HOM05D000313 ORTHO05D000065 4.2e-07 60.1 163 31.9
BolC7t42406H Brassica oleracea HOM05D000313 ORTHO05D000065 4.2e-07 60.1 92 37.0
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 5.5e-07 59.7 92 35.9
BcaB05g24116 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-07 59.3 73 49.3
BcaC01g04003 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-07 59.3 100 40.0
BcaC03g15710 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-07 59.3 87 44.8
BolC5t30506H Brassica oleracea HOM05D000313 ORTHO05D000065 7.2e-07 59.3 92 34.8
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 9.4e-07 58.9 92 37.0
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 9.4e-07 58.9 92 37.0
BcaB07g30333 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-06 58.5 71 46.5
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-06 58.5 92 37.0
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-06 58.5 80 42.5
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-06 58.5 80 40.0
A03p45920 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-06 58.5 92 37.0
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-06 58.5 80 40.0
A09p63130 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-06 58.5 92 40.2
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-06 58.5 92 37.0
C07p40630 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-06 58.5 80 42.5
BolC8t47721H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-06 58.5 165 30.9
BraA09t41667Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-06 58.5 92 40.2
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-06 58.2 161 29.2
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-06 58.2 161 27.3
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-06 58.2 161 29.2
BcaB02g07631 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-06 57.8 92 39.1
BcaC07g37360 Brassica carinata HOM05D000313 ORTHO05D000065 2.1e-06 57.8 92 38.0
A09p24570 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-06 57.8 80 41.2
C04p27570 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-06 57.8 153 36.6
BolC4t24298H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-06 57.8 153 36.6
BolC8t47660H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-06 57.8 92 38.0
BcaB01g01178 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-06 57.4 92 35.9
BcaC09g50772 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-06 57.4 88 38.6
C09p33280 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-06 57.4 92 35.9
BolC9t56164H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-06 57.4 92 35.9
BraA06t24916Z Brassica rapa HOM05D000313 ORTHO05D000065 2.7e-06 57.4 80 41.2
BcaC02g10521 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-06 57.0 87 43.7
BcaNung04477 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-06 57.0 98 37.8
C09p44110 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-06 57.0 92 37.0
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-06 57.0 80 38.8
BcaC03g16075 Brassica carinata HOM05D000022 ORTHO05D013684 4.6e-06 56.6 92 34.8
C05p50150 Brassica napus HOM05D000313 ORTHO05D000065 4.6e-06 56.6 78 42.3
BolC2t09854H Brassica oleracea HOM05D000313 ORTHO05D000065 4.6e-06 56.6 92 34.8
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 6.1e-06 56.2 92 33.7
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 6.1e-06 56.2 92 35.9
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 6.1e-06 56.2 169 27.2
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 6.1e-06 56.2 80 38.8
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 6.1e-06 56.2 169 27.2
BraA09t39839Z Brassica rapa HOM05D000313 ORTHO05D000065 6.1e-06 56.2 80 47.5
BcaB06g26404 Brassica carinata HOM05D000313 ORTHO05D000065 7.9e-06 55.8 51 52.9
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 7.9e-06 55.8 80 38.8
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 7.9e-06 55.8 80 38.8
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 7.9e-06 55.8 165 26.7
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 7.9e-06 55.8 92 34.8
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 7.9e-06 55.8 85 37.6
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 7.9e-06 55.8 81 40.7
C06p23850 Brassica napus HOM05D000313 ORTHO05D000065 7.9e-06 55.8 54 50.0
BolC6t37553H Brassica oleracea HOM05D000313 ORTHO05D000065 7.9e-06 55.8 66 42.4
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 7.9e-06 55.8 80 38.8
Sp4g05770 Schrenkiella parvula HOM05D000313 ORTHO05D000065 7.9e-06 55.8 76 39.5


User provided reference genes

Program Settings