Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33152 Brassica carinata HOM05D003348 ORTHO05D010016 4.8e-305 1050.4 558 100.0
BcaB07g33116 Brassica carinata HOM05D003348 ORTHO05D010016 2.2e-177 626.3 507 71.0
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 2.0e-165 586.6 411 82.0
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 2.3e-150 536.6 423 74.7
BcaC02g08685 Brassica carinata HOM05D003348 ORTHO05D010016 2.0e-141 506.9 470 66.4
C09p43770 Brassica napus HOM05D003348 ORTHO05D010016 6.1e-135 485.3 534 56.7
BolC9t57261H Brassica oleracea HOM05D003348 ORTHO05D010016 2.0e-133 480.3 534 57.9
BcaB05g22915 Brassica carinata HOM05D003348 ORTHO05D010016 7.0e-131 471.9 458 64.4
BolC1t02733H Brassica oleracea HOM05D003348 ORTHO05D010016 1.6e-119 434.1 495 56.6
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 3.4e-117 426.4 427 63.9
BcaC01g00111 Brassica carinata HOM05D003348 ORTHO05D010016 2.1e-111 407.1 359 68.2
BcaB06g26670 Brassica carinata HOM05D003348 ORTHO05D010016 1.6e-106 391.0 457 59.5
BcaC03g16941 Brassica carinata HOM05D003348 ORTHO05D010016 2.7e-106 390.2 470 54.7
C09p50420 Brassica napus HOM05D003348 ORTHO05D010016 1.0e-105 388.3 487 54.6
BraA06t26263Z Brassica rapa HOM05D003348 ORTHO05D011028 5.1e-105 386.0 507 53.8
BolC6t38448H Brassica oleracea HOM05D003348 ORTHO05D010016 1.5e-104 384.4 331 64.7
A03p65970 Brassica napus HOM05D003348 ORTHO05D010016 9.5e-104 381.7 467 53.3
A02p04450 Brassica napus HOM05D003348 ORTHO05D010016 1.2e-101 374.8 441 53.1
C06p29220 Brassica napus HOM05D003348 ORTHO05D010016 4.9e-100 369.4 490 51.6
BolC8t46861H Brassica oleracea HOM05D003348 ORTHO05D010016 9.9e-93 345.1 353 60.9
BcaB04g19403 Brassica carinata HOM05D003348 ORTHO05D010016 1.9e-91 340.9 470 49.6
C01p28000 Brassica napus HOM05D003348 ORTHO05D010016 2.4e-91 340.5 492 50.2
BraA05t21730Z Brassica rapa HOM05D003348 ORTHO05D010016 9.3e-91 338.6 400 54.8
BcaC02g11615 Brassica carinata HOM05D003348 ORTHO05D010016 5.1e-89 332.8 464 50.2
BolC9t57897H Brassica oleracea HOM05D003348 ORTHO05D010016 3.3e-88 330.1 500 47.6
A10p18440 Brassica napus HOM05D003348 ORTHO05D010016 1.5e-85 321.2 279 69.2
BolC4t24341H Brassica oleracea HOM05D003348 ORTHO05D011028 8.4e-84 315.5 361 58.4
C07p09080 Brassica napus HOM05D003348 ORTHO05D010016 2.1e-79 300.8 524 43.9
BolC7t40801H Brassica oleracea HOM05D003348 ORTHO05D010016 8.1e-79 298.9 464 45.5
C04p13150 Brassica napus HOM05D003348 ORTHO05D010016 3.1e-78 297.0 231 68.4
BcaC07g42527 Brassica carinata HOM05D003348 ORTHO05D009907 1.2e-74 285.0 458 45.4
BcaC04g20417 Brassica carinata HOM05D003348 ORTHO05D010016 5.6e-72 276.2 377 51.2
BcaB03g16335 Brassica carinata HOM05D003348 ORTHO05D010016 3.1e-70 270.4 398 47.7
BolC8t47537H Brassica oleracea HOM05D003348 ORTHO05D010016 2.6e-69 267.3 453 43.0
BolC7t41316H Brassica oleracea HOM05D003348 ORTHO05D010016 7.6e-69 265.8 411 47.2
A01p32750 Brassica napus HOM05D003348 ORTHO05D010016 4.9e-68 263.1 208 66.3
BcaC06g36007 Brassica carinata HOM05D003348 ORTHO05D010016 2.7e-66 257.3 377 49.6
C04p27970 Brassica napus HOM05D003348 ORTHO05D011028 1.3e-65 255.0 361 51.5
BcaB05g23930 Brassica carinata HOM05D003348 ORTHO05D010016 5.1e-65 253.1 421 45.8
BcaC07g37267 Brassica carinata HOM05D003348 ORTHO05D010016 4.3e-64 250.0 376 44.9
BraA03t15649Z Brassica rapa HOM05D003348 ORTHO05D010016 3.7e-63 246.9 190 69.5
A03p49040 Brassica napus HOM05D003348 ORTHO05D010016 8.2e-63 245.7 461 42.5
BcaC04g20095 Brassica carinata HOM05D006890 ORTHO05D000421 5.0e-60 236.5 316 53.2
BcaC03g16878 Brassica carinata HOM05D003348 ORTHO05D010016 1.4e-59 235.0 362 48.3
BraA09t38032Z Brassica rapa HOM05D003348 ORTHO05D010016 2.1e-58 231.1 446 42.4
C07p04070 Brassica napus HOM05D003348 ORTHO05D010016 4.3e-56 223.4 429 41.0
BraA02t07591Z Brassica rapa HOM05D003348 ORTHO05D010016 2.8e-55 220.7 191 65.4
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 1.2e-53 215.3 146 77.4
BcaC05g27372 Brassica carinata HOM05D003348 ORTHO05D010016 1.1e-51 208.8 176 66.5
A09p59860 Brassica napus HOM05D003348 ORTHO05D011028 1.1e-51 208.8 322 44.7
BcaC05g28880 Brassica carinata HOM05D003348 ORTHO05D010016 1.9e-51 208.0 170 65.9
BcaC05g25941 Brassica carinata HOM05D003348 ORTHO05D010016 1.2e-50 205.3 171 64.3
BcaC05g28875 Brassica carinata HOM05D003348 ORTHO05D010016 5.1e-49 199.9 473 36.6
C05p18920 Brassica napus HOM05D003348 ORTHO05D010016 9.7e-48 195.7 162 64.8
C09p44060 Brassica napus HOM05D003348 ORTHO05D010016 1.7e-47 194.9 235 59.6
BcaC06g36451 Brassica carinata HOM05D003348 ORTHO05D010016 3.4e-45 187.2 446 35.4
C03p71560 Brassica napus HOM05D003348 ORTHO05D010016 4.5e-45 186.8 169 60.9
A04p08260 Brassica napus HOM05D003348 ORTHO05D010016 3.9e-41 173.7 211 49.8
BcaC04g20110 Brassica carinata HOM05D006890 ORTHO05D009907 3.7e-39 167.2 146 60.3
BolC2t10874H Brassica oleracea HOM05D003348 ORTHO05D010016 6.5e-36 156.4 128 67.2
C06p34230 Brassica napus HOM05D006890 ORTHO05D040102 4.0e-33 147.1 192 55.7
BcaC02g10517 Brassica carinata HOM05D003348 ORTHO05D010016 6.7e-33 146.4 374 36.9
BcaC08g45319 Brassica carinata HOM05D003348 ORTHO05D010016 8.8e-33 146.0 96 77.1
BcaC06g36529 Brassica carinata HOM05D003348 ORTHO05D010016 1.3e-31 142.1 98 75.5
C02p47780 Brassica napus HOM05D003348 ORTHO05D010016 8.2e-31 139.4 98 73.5
BcaB07g33923 Brassica carinata HOM05D003348 ORTHO05D010016 2.7e-29 134.4 77 90.9
C03p71550 Brassica napus HOM05D003348 ORTHO05D010016 2.5e-27 127.9 229 41.5
C09p24810 Brassica napus HOM05D003348 ORTHO05D010016 3.2e-27 127.5 150 50.7
C09p44080 Brassica napus HOM05D003348 ORTHO05D010016 7.2e-27 126.3 84 75.0
BolC4t24342H Brassica oleracea HOM05D003348 ORTHO05D010016 1.2e-26 125.6 82 79.3
BolC2t10813H Brassica oleracea HOM05D003348 ORTHO05D010016 6.8e-25 119.8 84 71.4
A09p62230 Brassica napus HOM05D006890 ORTHO05D000421 4.4e-24 117.1 86 68.6
C03p32970 Brassica napus HOM05D003348 ORTHO05D010016 4.4e-24 117.1 86 68.6
A04p10090 Brassica napus HOM05D003348 ORTHO05D010016 1.4e-22 112.1 336 35.7
A04p11990 Brassica napus HOM05D003348 ORTHO05D011028 1.8e-22 111.7 348 35.3
BraA04t16864Z Brassica rapa HOM05D003348 ORTHO05D010016 2.0e-21 108.2 344 34.6
BolC7t40723H Brassica oleracea HOM05D003348 ORTHO05D040102 5.0e-20 103.6 192 47.9
Aa31sc263G10 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.5e-19 101.3 304 24.3
C09p24820 Brassica napus HOM05D003348 ORTHO05D010016 4.2e-19 100.5 61 80.3
C09p44070 Brassica napus HOM05D003348 ORTHO05D010016 4.2e-19 100.5 59 81.4
C02p48450 Brassica napus HOM05D003348 ORTHO05D010016 1.0e-17 95.9 60 81.7
BolC2t10875H Brassica oleracea HOM05D003348 ORTHO05D010016 1.0e-17 95.9 60 81.7
Aa31LG2G17250 Aethionema arabicum HOM05D003348 ORTHO05D010016 4.0e-17 94.0 201 26.9
BcaB04g17835 Brassica carinata HOM05D003348 ORTHO05D091710 4.0e-17 94.0 69 75.4
Aa31LG5G22030 Aethionema arabicum HOM05D003348 ORTHO05D000395 5.2e-17 93.6 298 23.2
Aa31LG9G6060 Aethionema arabicum HOM05D003348 ORTHO05D000395 6.8e-17 93.2 306 23.2
C04p14390 Brassica napus HOM05D003348 ORTHO05D013252 2.6e-16 91.3 103 59.2
Aa31sc411G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 5.7e-16 90.1 367 24.5
BraA03t15650Z Brassica rapa HOM05D003348 ORTHO05D010016 7.5e-16 89.7 135 47.4
BolC9t58934H Brassica oleracea HOM05D003348 ORTHO05D013252 2.2e-15 88.2 103 56.3
C08p06960 Brassica napus HOM05D003348 ORTHO05D011028 3.1e-14 84.3 51 86.3
C03p79880 Brassica napus HOM05D003348 ORTHO05D013252 4.1e-14 84.0 103 55.3
BraA08t33333Z Brassica rapa HOM05D000471 ORTHO05D000199 5.9e-13 80.1 312 26.0
C09p12220 Brassica napus HOM05D003348 ORTHO05D013252 7.7e-13 79.7 122 48.4
BolC8t47761H Brassica oleracea HOM05D000471 ORTHO05D000199 1.9e-11 75.1 231 26.8
BolC3t17625H Brassica oleracea HOM05D003348 ORTHO05D013252 5.6e-11 73.6 107 49.5
BolC3t19447H Brassica oleracea HOM05D003348 ORTHO05D010016 5.6e-11 73.6 78 60.3
BolC9t55313H Brassica oleracea HOM05D000471 ORTHO05D000199 5.6e-11 73.6 302 25.5
BcaC05g25940 Brassica carinata HOM05D003348 ORTHO05D039563 9.5e-11 72.8 105 59.0
C07p03250 Brassica napus HOM05D003348 ORTHO05D011028 1.2e-10 72.4 78 59.0
Aa31LG9G5280 Aethionema arabicum HOM05D003348 ORTHO05D010016 1.6e-10 72.0 123 31.7
Thhalv10023146m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.6e-10 72.0 252 24.6
C05p41480 Brassica napus HOM05D000471 ORTHO05D000199 3.6e-10 70.9 308 25.0
BolC5t32887H Brassica oleracea HOM05D000471 ORTHO05D000199 3.6e-10 70.9 308 25.0
C02p51080 Brassica napus HOM05D000975 ORTHO05D003128 4.7e-10 70.5 336 21.7
BolC4t25495H Brassica oleracea HOM05D000471 ORTHO05D000199 4.7e-10 70.5 276 24.6
Carub.0008s2148 Capsella rubella HOM05D000471 ORTHO05D000199 4.7e-10 70.5 212 24.5
C02p45180 Brassica napus HOM05D000975 ORTHO05D003128 6.1e-10 70.1 324 21.3
BraA03t15651Z Brassica rapa HOM05D003348 ORTHO05D011028 1.0e-09 69.3 79 55.7
Thhalv10001218m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.0e-09 69.3 315 24.4
BcaC03g15685 Brassica carinata HOM05D000975 ORTHO05D003128 1.4e-09 68.9 324 21.9
BcaC04g23093 Brassica carinata HOM05D003348 ORTHO05D013252 1.4e-09 68.9 61 68.9
C07p07360 Brassica napus HOM05D000975 ORTHO05D003128 1.4e-09 68.9 324 21.9
BolC6t38087H Brassica oleracea HOM05D003348 ORTHO05D010016 1.4e-09 68.9 59 67.8
BolC9t54115H Brassica oleracea HOM05D003348 ORTHO05D013252 1.4e-09 68.9 61 68.9
C02p48430 Brassica napus HOM05D003348 ORTHO05D011028 1.8e-09 68.6 59 67.8
SpUn0002_0500 Schrenkiella parvula HOM05D003348 ORTHO05D010016 2.3e-09 68.2 64 53.1
Aa31sc510G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 3.0e-09 67.8 197 22.3
BcaC01g00441 Brassica carinata HOM05D003348 ORTHO05D013252 4.0e-09 67.4 87 55.2
A01p32740 Brassica napus HOM05D003348 ORTHO05D039563 4.0e-09 67.4 88 62.5
BolC2t09407H Brassica oleracea HOM05D000975 ORTHO05D003128 4.0e-09 67.4 319 21.3
BcaNung04170 Brassica carinata HOM05D000975 ORTHO05D003128 5.2e-09 67.0 324 21.0
BraA08t33102Z Brassica rapa HOM05D003348 ORTHO05D013252 5.2e-09 67.0 87 56.3
A09p29880 Brassica napus HOM05D000975 ORTHO05D003128 6.8e-09 66.6 324 21.9
Thhalv10012192m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 6.8e-09 66.6 260 23.5
C03p65070 Brassica napus HOM05D003348 ORTHO05D011028 8.9e-09 66.2 65 58.5
C07p41030 Brassica napus HOM05D003348 ORTHO05D011028 8.9e-09 66.2 65 58.5
Sp7g08630 Schrenkiella parvula HOM05D000471 ORTHO05D000199 8.9e-09 66.2 336 22.0
C08p14260 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-08 65.9 323 21.4
BolC6t38449H Brassica oleracea HOM05D003348 ORTHO05D011028 1.2e-08 65.9 59 66.1
Thhalv10012293m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.2e-08 65.9 259 23.6
A06p33000 Brassica napus HOM05D000975 ORTHO05D003128 1.5e-08 65.5 324 21.3
C01p28620 Brassica napus HOM05D000471 ORTHO05D000199 1.5e-08 65.5 273 24.2
A07p05600 Brassica napus HOM05D000975 ORTHO05D003128 2.0e-08 65.1 324 20.7
BcaC01g03324 Brassica carinata HOM05D003348 ORTHO05D013252 2.6e-08 64.7 55 69.1
C03p53650 Brassica napus HOM05D003348 ORTHO05D013252 2.6e-08 64.7 55 69.1
BolSC21t60244H Brassica oleracea HOM05D000471 ORTHO05D000199 3.4e-08 64.3 257 24.5
C01p38100 Brassica napus HOM05D000471 ORTHO05D000199 4.4e-08 63.9 269 23.0
Aa31LG11G7530 Aethionema arabicum HOM05D000471 ORTHO05D000199 5.7e-08 63.5 273 25.3
BcaC03g14229 Brassica carinata HOM05D000975 ORTHO05D003128 5.7e-08 63.5 324 20.4
Thhalv10019787m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.7e-08 63.5 260 23.1
Thhalv10012042m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 7.5e-08 63.2 219 26.0
Aa31LG10G8940 Aethionema arabicum HOM05D000471 ORTHO05D000199 9.8e-08 62.8 227 26.4
A07p02240 Brassica napus HOM05D000975 ORTHO05D003128 2.2e-07 61.6 325 21.2
BolC2t10008H Brassica oleracea HOM05D000471 ORTHO05D000199 2.2e-07 61.6 307 22.5
Thhalv10022967m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.2e-07 61.6 230 22.6
Aa31sc154G10 Aethionema arabicum HOM05D000471 ORTHO05D000199 2.9e-07 61.2 225 24.4
C03p67770 Brassica napus HOM05D000471 ORTHO05D000199 2.9e-07 61.2 230 25.2
Thhalv10029454m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.9e-07 61.2 129 33.3
Thhalv10026990m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.7e-07 60.8 217 24.4
Thhalv10002160m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 4.9e-07 60.5 316 23.1
C02p48440 Brassica napus HOM05D003348 ORTHO05D010016 6.4e-07 60.1 59 61.0
Thhalv10009813m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.4e-07 60.1 121 29.8
Thhalv10012223m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 6.4e-07 60.1 217 24.4
BolC2t10781H Brassica oleracea HOM05D000471 ORTHO05D000199 8.3e-07 59.7 220 25.0
Thhalv10023860m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 8.3e-07 59.7 202 24.8
A06p23380 Brassica napus HOM05D000975 ORTHO05D003128 1.1e-06 59.3 324 21.6
C05p49980 Brassica napus HOM05D003348 ORTHO05D011028 1.1e-06 59.3 109 43.1
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.1e-06 59.3 124 29.8
C02p40760 Brassica napus HOM05D000471 ORTHO05D000199 1.4e-06 58.9 273 22.7
C02p41620 Brassica napus HOM05D000471 ORTHO05D000199 1.4e-06 58.9 254 24.4
BcaC04g20351 Brassica carinata HOM05D000975 ORTHO05D003128 1.8e-06 58.5 301 22.9
BolC2t10303H Brassica oleracea HOM05D000471 ORTHO05D000199 1.8e-06 58.5 210 25.2
Thhalv10000549m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.8e-06 58.5 220 23.2
C09p20800 Brassica napus HOM05D000471 ORTHO05D000199 2.4e-06 58.2 144 30.6
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.4e-06 58.2 163 23.9
BcaB04g17865 Brassica carinata HOM05D000975 ORTHO05D003128 3.2e-06 57.8 244 20.9
A05p29030 Brassica napus HOM05D000471 ORTHO05D000199 3.2e-06 57.8 312 24.0
C01p33600 Brassica napus HOM05D000471 ORTHO05D000199 3.2e-06 57.8 257 24.9
Thhalv10002307m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.2e-06 57.8 128 32.0
BcaB08g35625 Brassica carinata HOM05D000975 ORTHO05D003128 4.1e-06 57.4 354 20.9
BolC7t41755H Brassica oleracea HOM05D000471 ORTHO05D000199 4.1e-06 57.4 303 22.1
Thhalv10015545m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.1e-06 57.4 154 25.3
Thhalv10017920m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 4.1e-06 57.4 326 23.6
BolC1t03774H Brassica oleracea HOM05D000471 ORTHO05D000199 5.4e-06 57.0 303 21.8
BraA01t03402Z Brassica rapa HOM05D003348 ORTHO05D010016 5.4e-06 57.0 41 65.9
C06p16640 Brassica napus HOM05D000471 ORTHO05D000199 7.0e-06 56.6 312 24.0
BolC3t16855H Brassica oleracea HOM05D000471 ORTHO05D000199 7.0e-06 56.6 304 21.4
BraA09t39939Z Brassica rapa HOM05D003348 ORTHO05D011028 7.0e-06 56.6 76 51.3
C03p45800 Brassica napus HOM05D000471 ORTHO05D000199 9.2e-06 56.2 334 22.2
BolC1t02789H Brassica oleracea HOM05D000471 ORTHO05D000199 9.2e-06 56.2 307 22.1


User provided reference genes

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