Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 7.1e-154 547.4 303 100.0
BcaB06g26761 Brassica carinata HOM05D008414 ORTHO05D091670 2.4e-64 250.0 217 65.9
BcaB06g26481 Brassica carinata HOM05D008414 ORTHO05D094346 1.4e-61 240.7 224 62.9
BcaB05g23245 Brassica carinata HOM05D008414 ORTHO05D095473 3.2e-61 239.6 284 54.9
BcaB07g33316 Brassica carinata HOM05D008414 ORTHO05D092176 3.0e-59 233.0 286 53.1
BcaB02g11314 Brassica carinata HOM05D008414 ORTHO05D094225 1.9e-58 230.3 289 52.6
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 1.2e-55 221.1 132 89.4
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 2.0e-55 220.3 133 88.7
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 3.2e-53 213.0 134 87.3
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 1.6e-52 210.7 129 86.8
BcaB04g18489 Brassica carinata HOM05D008414 ORTHO05D092295 1.7e-51 207.2 109 96.3
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 5.1e-51 205.7 133 85.7
BcaB03g16287 Brassica carinata HOM05D008414 ORTHO05D094276 9.9e-47 191.4 186 60.2
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 1.1e-45 188.0 111 89.2
BcaB06g27026 Brassica carinata HOM05D008414 ORTHO05D090558 1.3e-43 181.0 99 93.9
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 1.5e-39 167.5 131 75.6
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 1.0e-35 154.8 98 86.7
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 1.9e-34 150.6 140 65.0
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 9.6e-34 148.3 98 85.7
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 9.6e-34 148.3 111 73.0
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 2.1e-33 147.1 111 73.0
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 1.4e-32 144.4 128 65.6
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 4.0e-32 142.9 128 65.6
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 5.3e-32 142.5 128 64.8
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 5.3e-32 142.5 128 65.6
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 6.9e-32 142.1 111 70.3
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 9.0e-32 141.7 128 64.8
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 1.2e-31 141.4 109 71.6
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 2.6e-31 140.2 124 66.9
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 3.4e-31 139.8 84 86.9
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 4.5e-31 139.4 130 64.6
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 4.5e-31 139.4 122 67.2
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 5.8e-31 139.0 83 88.0
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 5.8e-31 139.0 129 63.6
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 1.0e-30 138.3 120 67.5
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 1.3e-30 137.9 103 72.8
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-30 137.9 147 56.5
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 1.3e-30 137.9 155 54.2
BcaB06g26479 Brassica carinata HOM05D008414 ORTHO05D014108 2.2e-30 137.1 74 94.6
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 2.2e-30 137.1 101 73.3
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 2.9e-30 136.7 122 65.6
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 3.8e-30 136.3 130 63.1
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 4.9e-30 136.0 130 59.2
BcaB07g33218 Brassica carinata HOM05D008414 ORTHO05D014108 6.5e-30 135.6 74 94.6
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 6.5e-30 135.6 128 63.3
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-29 134.8 122 65.6
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-29 134.8 111 67.6
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 1.4e-29 134.4 83 85.5
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 1.4e-29 134.4 118 66.1
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 1.9e-29 134.0 120 65.8
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 2.5e-29 133.7 99 73.7
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 5.5e-29 132.5 131 58.0
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 7.1e-29 132.1 120 65.0
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 9.3e-29 131.7 120 65.0
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 9.3e-29 131.7 129 61.2
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 2.1e-28 130.6 129 60.5
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 3.5e-28 129.8 139 56.8
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 4.6e-28 129.4 112 67.9
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 6.0e-28 129.0 113 68.1
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 7.9e-28 128.6 120 64.2
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 7.9e-28 128.6 101 70.3
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 1.8e-27 127.5 120 64.2
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 5.1e-27 125.9 124 62.1
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 6.7e-27 125.6 120 63.3
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 1.1e-26 124.8 131 60.3
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 1.5e-26 124.4 73 89.0
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 1.9e-26 124.0 119 61.3
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 1.3e-25 121.3 137 56.2
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 1.6e-25 120.9 126 59.5
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 2.2e-25 120.6 120 61.7
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 2.8e-25 120.2 126 57.9
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 2.8e-25 120.2 137 56.2
BolC4t23821H Brassica oleracea HOM05D008414 ORTHO05D014108 6.3e-25 119.0 104 62.5
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 3.1e-24 116.7 93 71.0
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 3.1e-24 116.7 68 88.2
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 4.1e-24 116.3 103 71.8
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-23 114.8 122 60.7
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 2.0e-23 114.0 151 53.0
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 3.4e-23 113.2 114 57.9
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 5.9e-23 112.5 122 59.8
C04p09830 Brassica napus HOM05D008414 ORTHO05D014108 1.0e-22 111.7 104 60.6
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 5.0e-22 109.4 84 72.6
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 1.4e-21 107.8 91 72.5
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 3.2e-21 106.7 102 63.7
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 9.4e-21 105.1 128 53.9
BcaC06g35525 Brassica carinata HOM05D008414 ORTHO05D014108 1.6e-20 104.4 108 51.9
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 1.6e-20 104.4 128 54.7
BolC3t18883H Brassica oleracea HOM05D008414 ORTHO05D039896 1.6e-20 104.4 149 44.3
C09p45510 Brassica napus HOM05D008414 ORTHO05D032461 2.1e-20 104.0 119 53.8
C07p13930 Brassica napus HOM05D008414 ORTHO05D014108 2.7e-20 103.6 108 53.7
C03p66100 Brassica napus HOM05D008414 ORTHO05D003542 3.6e-20 103.2 109 52.3
BcaC04g20282 Brassica carinata HOM05D008414 ORTHO05D032461 4.6e-20 102.8 119 52.9
C02p39460 Brassica napus HOM05D008414 ORTHO05D014108 4.6e-20 102.8 154 40.3
C03p69240 Brassica napus HOM05D008414 ORTHO05D008559 4.6e-20 102.8 78 65.4
BolC3t19181H Brassica oleracea HOM05D008414 ORTHO05D008559 4.6e-20 102.8 78 65.4
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 6.1e-20 102.4 211 40.8
BcaB03g16423 Brassica carinata HOM05D001498 ORTHO05D091575 1.0e-19 101.7 103 64.1
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 1.0e-19 101.7 132 55.3
BolC9t57420H Brassica oleracea HOM05D008414 ORTHO05D032461 1.8e-19 100.9 119 53.8
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 2.3e-19 100.5 72 79.2
BolC7t41775H Brassica oleracea HOM05D008414 ORTHO05D032311 2.3e-19 100.5 103 53.4
BcaB03g16772 Brassica carinata HOM05D008414 ORTHO05D014108 3.0e-19 100.1 102 57.8
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 5.1e-19 99.4 94 63.8
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 5.1e-19 99.4 103 60.2
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 5.1e-19 99.4 78 66.7
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 5.1e-19 99.4 70 72.9
BcaC06g35619 Brassica carinata HOM05D008414 ORTHO05D032311 6.7e-19 99.0 103 52.4
C07p12910 Brassica napus HOM05D008414 ORTHO05D032311 6.7e-19 99.0 103 52.4
C07p04240 Brassica napus HOM05D008414 ORTHO05D032445 8.8e-19 98.6 98 54.1
BcaC06g35065 Brassica carinata HOM05D008414 ORTHO05D014108 1.5e-18 97.8 108 50.0
BolC7t41040H Brassica oleracea HOM05D008414 ORTHO05D014108 1.5e-18 97.8 68 67.6
BraA01t02473Z Brassica rapa HOM05D008414 ORTHO05D022023 1.9e-18 97.4 81 61.7
C07p06230 Brassica napus HOM05D008414 ORTHO05D014108 4.3e-18 96.3 75 61.3
BcaC04g20543 Brassica carinata HOM05D008414 ORTHO05D014108 5.7e-18 95.9 154 38.3
BcaC06g36228 Brassica carinata HOM05D001498 ORTHO05D008559 5.7e-18 95.9 68 66.2
C09p42300 Brassica napus HOM05D008414 ORTHO05D014108 5.7e-18 95.9 154 38.3
BolC7t40818H Brassica oleracea HOM05D008414 ORTHO05D032445 5.7e-18 95.9 103 51.5
BraSC37t46119Z Brassica rapa HOM05D008414 ORTHO05D022023 5.7e-18 95.9 105 57.1
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-17 94.7 65 83.1
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 3.1e-16 90.1 62 82.3
BcaC09g48601 Brassica carinata HOM05D001498 ORTHO05D008559 2.2e-14 84.0 98 55.1
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 2.2e-14 84.0 132 44.7
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 5.0e-14 82.8 103 52.4
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 6.5e-14 82.4 132 44.7
BcaC06g35693 Brassica carinata HOM05D001498 ORTHO05D008559 6.5e-14 82.4 101 52.5
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 1.4e-13 81.3 83 55.4
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 3.2e-13 80.1 87 56.3
BcaB03g16624 Brassica carinata HOM05D008414 ORTHO05D095320 5.5e-13 79.3 257 31.5
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 1.6e-12 77.8 154 43.5
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 2.7e-12 77.0 84 57.1
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 6.1e-12 75.9 89 49.4
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 1.0e-11 75.1 107 43.0
BcaNung05285 Brassica carinata HOM05D008414 ORTHO05D014108 1.0e-11 75.1 44 84.1
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 1.4e-11 74.7 96 52.1
BcaB02g11224 Brassica carinata HOM05D008414 ORTHO05D096114 2.3e-11 73.9 56 73.2
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 2.3e-11 73.9 107 43.9
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 3.0e-11 73.6 107 43.0
C01p34340 Brassica napus HOM05D008414 ORTHO05D040375 5.1e-11 72.8 74 58.1
BolC1t03404H Brassica oleracea HOM05D008414 ORTHO05D040375 5.1e-11 72.8 74 58.1
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 6.7e-11 72.4 164 40.9
BcaB02g10766 Brassica carinata HOM05D008414 ORTHO05D014108 8.8e-11 72.0 95 45.3
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 1.1e-10 71.6 163 40.5
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 1.5e-10 71.2 109 45.0
BolC2t09959H Brassica oleracea HOM05D008414 ORTHO05D033195 1.5e-10 71.2 48 66.7
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 2.6e-10 70.5 107 42.1
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 3.3e-10 70.1 87 52.9
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 3.3e-10 70.1 139 38.1
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 3.3e-10 70.1 107 43.0
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 4.4e-10 69.7 99 46.5
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 4.4e-10 69.7 115 46.1
BcaB05g23794 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-09 68.2 72 50.0
BolC9t57108H Brassica oleracea HOM05D008414 ORTHO05D033115 1.7e-09 67.8 87 46.0
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 2.8e-09 67.0 104 42.3
C07p05320 Brassica napus HOM05D008414 ORTHO05D033195 8.2e-09 65.5 85 49.4
BolC7t40932H Brassica oleracea HOM05D008414 ORTHO05D033195 8.2e-09 65.5 85 49.4
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 1.4e-08 64.7 73 46.6
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 1.4e-08 64.7 92 45.7
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 2.4e-08 63.9 104 40.4
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 2.4e-08 63.9 97 43.3
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 2.4e-08 63.9 83 49.4
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 3.1e-08 63.5 83 49.4
BcaB07g33140 Brassica carinata HOM05D015118 ORTHO05D019993 4.1e-08 63.2 87 41.4
BcaC01g02360 Brassica carinata HOM05D008414 ORTHO05D039896 9.1e-08 62.0 118 38.1
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 9.1e-08 62.0 77 51.9
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 1.5e-07 61.2 52 61.5
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 2.0e-07 60.8 107 41.1
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 2.6e-07 60.5 78 44.9
BcaC01g02039 Brassica carinata HOM05D008414 ORTHO05D008559 4.5e-07 59.7 47 66.0
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 5.9e-07 59.3 99 43.4
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 7.7e-07 58.9 114 37.7
C05p45420 Brassica napus HOM05D008414 ORTHO05D022023 7.7e-07 58.9 77 53.2
BcaB03g16193 Brassica carinata HOM05D001498 ORTHO05D092429 1.3e-06 58.2 40 77.5
C07p06910 Brassica napus HOM05D008414 ORTHO05D022023 1.7e-06 57.8 74 54.1
C04p05490 Brassica napus HOM05D008414 ORTHO05D022023 2.2e-06 57.4 77 53.2
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 2.9e-06 57.0 132 40.2
C01p38760 Brassica napus HOM05D008414 ORTHO05D033115 2.9e-06 57.0 62 46.8
BolC1t03833H Brassica oleracea HOM05D008414 ORTHO05D033115 2.9e-06 57.0 62 46.8
BcaC09g51817 Brassica carinata HOM05D001498 ORTHO05D096326 3.8e-06 56.6 41 75.6
A10p08830 Brassica napus HOM05D001379 ORTHO05D001277 3.8e-06 56.6 74 54.1
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 6.5e-06 55.8 140 34.3
BcaC09g48840 Brassica carinata HOM05D001498 ORTHO05D008559 6.5e-06 55.8 41 63.4
BcaB06g27015 Brassica carinata HOM05D015118 ORTHO05D091520 8.5e-06 55.5 65 44.6


User provided reference genes

Program Settings