Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33082 Brassica carinata HOM05D001498 ORTHO05D016036 1.6e-25 118.6 61 100.0
BcaC05g28432 Brassica carinata HOM05D001498 ORTHO05D016036 1.6e-20 102.1 56 92.9
BcaC09g50110 Brassica carinata HOM05D001498 ORTHO05D016036 1.6e-20 102.1 56 92.9
BcaB06g26725 Brassica carinata HOM05D001498 ORTHO05D016036 2.1e-20 101.7 56 92.9
BcaB01g01815 Brassica carinata HOM05D001498 ORTHO05D016036 2.7e-20 101.3 56 92.9
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 3.6e-20 100.9 56 92.9
BcaC01g06538 Brassica carinata HOM05D001498 ORTHO05D016036 3.6e-20 100.9 56 91.1
BcaB07g33756 Brassica carinata HOM05D001498 ORTHO05D003542 3.3e-18 94.4 56 91.1
BolC3t19485H Brassica oleracea HOM05D001498 ORTHO05D016036 7.4e-18 93.2 56 87.5
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 1.6e-17 92.0 56 89.3
BolC9t54651H Brassica oleracea HOM05D001498 ORTHO05D016036 3.7e-17 90.9 62 79.0
BolC3t16976H Brassica oleracea HOM05D001498 ORTHO05D011263 1.1e-16 89.4 56 82.1
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 2.4e-16 88.2 56 80.4
C03p66360 Brassica napus HOM05D001498 ORTHO05D013028 2.4e-16 88.2 56 80.4
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 2.4e-16 88.2 56 80.4
A01p20530 Brassica napus HOM05D001498 ORTHO05D013028 5.3e-16 87.0 56 78.6
BraA08t32949Z Brassica rapa HOM05D001498 ORTHO05D011263 5.3e-16 87.0 56 78.6
BraA09t38881Z Brassica rapa HOM05D001498 ORTHO05D013028 5.3e-16 87.0 56 78.6
BraA10t42921Z Brassica rapa HOM05D001498 ORTHO05D011263 5.3e-16 87.0 56 78.6
C02p52010 Brassica napus HOM05D001498 ORTHO05D013028 9.0e-16 86.3 56 78.6
BraA08t32832Z Brassica rapa HOM05D001498 ORTHO05D011263 9.0e-16 86.3 56 78.6
BolC5t32219H Brassica oleracea HOM05D001498 ORTHO05D016036 1.2e-15 85.9 56 78.6
BraA08t32773Z Brassica rapa HOM05D001498 ORTHO05D011263 1.2e-15 85.9 56 76.8
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 2.0e-15 85.1 56 78.6
BolC3t17912H Brassica oleracea HOM05D001498 ORTHO05D011263 2.0e-15 85.1 56 78.6
A01p28570 Brassica napus HOM05D001498 ORTHO05D013028 2.6e-15 84.7 56 76.8
BraA01t03045Z Brassica rapa HOM05D001498 ORTHO05D011263 2.6e-15 84.7 56 76.8
A08p06040 Brassica napus HOM05D001498 ORTHO05D013028 4.5e-15 84.0 56 75.0
BraA08t32604Z Brassica rapa HOM05D001498 ORTHO05D011263 4.5e-15 84.0 56 75.0
BcaC04g22592 Brassica carinata HOM05D001498 ORTHO05D019943 1.4e-11 72.4 60 66.7
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 3.3e-10 67.8 55 69.1
BolC1t04861H Brassica oleracea HOM05D001498 ORTHO05D016036 2.2e-09 65.1 43 79.1
A09p33370 Brassica napus HOM05D001379 ORTHO05D001277 3.7e-09 64.3 36 80.6
C09p19430 Brassica napus HOM05D001498 ORTHO05D013028 4.8e-09 63.9 45 75.6
C04p56110 Brassica napus HOM05D001498 ORTHO05D019943 8.2e-09 63.2 42 78.6
C08p06690 Brassica napus HOM05D001498 ORTHO05D027369 8.2e-09 63.2 42 78.6
C09p27460 Brassica napus HOM05D001498 ORTHO05D013028 8.2e-09 63.2 42 78.6
BolC8t49420H Brassica oleracea HOM05D001498 ORTHO05D011448 8.2e-09 63.2 42 78.6
C01p48960 Brassica napus HOM05D001498 ORTHO05D013028 1.1e-08 62.8 42 78.6
C04p41870 Brassica napus HOM05D001498 ORTHO05D011448 1.4e-08 62.4 41 80.5
BcaC04g20365 Brassica carinata HOM05D001498 ORTHO05D095589 1.8e-08 62.0 42 76.2
A05p28410 Brassica napus HOM05D001498 ORTHO05D011448 1.8e-08 62.0 42 76.2
A08p09500 Brassica napus HOM05D001498 ORTHO05D011448 1.8e-08 62.0 42 76.2
C09p28450 Brassica napus HOM05D001498 ORTHO05D027369 1.8e-08 62.0 42 76.2
BraA07t28351Z Brassica rapa HOM05D001498 ORTHO05D011448 1.8e-08 62.0 42 76.2
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 2.4e-08 61.6 44 72.7
A08p07530 Brassica napus HOM05D001498 ORTHO05D013028 4.1e-08 60.8 42 73.8
BolC3t18712H Brassica oleracea HOM05D001498 ORTHO05D011448 5.3e-08 60.5 42 73.8
A01p26280 Brassica napus HOM05D001498 ORTHO05D011448 9.1e-08 59.7 42 73.8
C09p16600 Brassica napus HOM05D001498 ORTHO05D011448 2.0e-07 58.5 41 78.0
BcaB04g17974 Brassica carinata HOM05D001498 ORTHO05D093757 8.5e-06 53.1 53 64.2


User provided reference genes

Program Settings