Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33081 Brassica carinata HOM05D001498 ORTHO05D092546 7.3e-43 176.8 88 100.0
BcaB01g01632 Brassica carinata HOM05D001498 ORTHO05D091966 4.9e-31 137.5 95 77.9
BcaB04g18488 Brassica carinata HOM05D001498 ORTHO05D011448 5.5e-30 134.0 145 55.9
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 2.3e-28 128.6 82 73.2
BcaB04g18117 Brassica carinata HOM05D001498 ORTHO05D008559 2.3e-28 128.6 80 77.5
BcaB01g03185 Brassica carinata HOM05D001498 ORTHO05D013028 1.6e-26 122.5 70 82.9
C09p27460 Brassica napus HOM05D001498 ORTHO05D013028 1.8e-25 119.0 79 70.9
C01p48960 Brassica napus HOM05D001498 ORTHO05D013028 3.1e-25 118.2 79 70.9
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 3.1e-25 118.2 140 51.4
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 3.1e-25 118.2 79 70.9
BcaB07g32208 Brassica carinata HOM05D001498 ORTHO05D027369 4.0e-25 117.9 80 72.5
C04p41870 Brassica napus HOM05D001498 ORTHO05D011448 9.0e-25 116.7 79 69.6
BcaC02g09115 Brassica carinata HOM05D001498 ORTHO05D027369 1.2e-24 116.3 79 69.6
C03p80470 Brassica napus HOM05D001498 ORTHO05D011448 1.2e-24 116.3 79 69.6
C08p06690 Brassica napus HOM05D001498 ORTHO05D027369 1.2e-24 116.3 79 69.6
C08p17900 Brassica napus HOM05D001498 ORTHO05D011448 1.2e-24 116.3 79 69.6
BolC7t40542H Brassica oleracea HOM05D001498 ORTHO05D104051 1.5e-24 115.9 79 69.6
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 5.8e-24 114.0 79 68.4
BcaB03g16193 Brassica carinata HOM05D001498 ORTHO05D092429 2.2e-23 112.1 63 82.5
BcaC04g20365 Brassica carinata HOM05D001498 ORTHO05D095589 4.9e-23 110.9 79 65.8
BolC9t57314H Brassica oleracea HOM05D001498 ORTHO05D011506 4.9e-23 110.9 79 65.8
BcaC03g13778 Brassica carinata HOM05D001498 ORTHO05D095664 1.6e-21 105.9 55 87.3
BcaB06g27860 Brassica carinata HOM05D001498 ORTHO05D093480 2.1e-21 105.5 60 81.7
BolC3t18712H Brassica oleracea HOM05D001498 ORTHO05D011448 1.8e-20 102.4 76 63.2
BolC8t49420H Brassica oleracea HOM05D001498 ORTHO05D011448 1.8e-20 102.4 71 67.6
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 6.7e-20 100.5 82 62.2
BcaB01g01482 Brassica carinata HOM05D001498 ORTHO05D095356 8.7e-20 100.1 65 72.3
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 2.5e-19 98.6 81 61.7
A08p07530 Brassica napus HOM05D001498 ORTHO05D013028 3.3e-19 98.2 82 61.0
BolC6t36733H Brassica oleracea HOM05D001498 ORTHO05D011506 7.4e-19 97.1 79 60.8
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 9.7e-19 96.7 80 60.0
C03p75890 Brassica napus HOM05D001498 ORTHO05D011448 2.8e-18 95.1 79 59.5
C09p16600 Brassica napus HOM05D001498 ORTHO05D011448 4.8e-18 94.4 79 60.8
A01p26280 Brassica napus HOM05D001498 ORTHO05D011448 1.4e-17 92.8 71 62.0
C01p30540 Brassica napus HOM05D001498 ORTHO05D011263 4.5e-16 87.8 80 57.5
BcaB05g23550 Brassica carinata HOM05D001498 ORTHO05D094912 7.7e-16 87.0 68 64.7
C03p56240 Brassica napus HOM05D001498 ORTHO05D011448 2.2e-15 85.5 92 57.6
A05p28410 Brassica napus HOM05D001498 ORTHO05D011448 1.9e-14 82.4 71 57.7
A07p02030 Brassica napus HOM05D001498 ORTHO05D011448 1.9e-14 82.4 86 57.0
A08p09500 Brassica napus HOM05D001498 ORTHO05D011448 1.9e-14 82.4 71 57.7
BraA07t28351Z Brassica rapa HOM05D001498 ORTHO05D011448 2.5e-14 82.0 71 57.7
C07p30740 Brassica napus HOM05D001498 ORTHO05D011448 5.5e-14 80.9 58 63.8
BolC3t18909H Brassica oleracea HOM05D001498 ORTHO05D011448 5.5e-14 80.9 58 63.8
BolC8t47734H Brassica oleracea HOM05D001498 ORTHO05D032596 5.5e-14 80.9 58 63.8
BolC1t02816H Brassica oleracea HOM05D001498 ORTHO05D032596 2.1e-13 79.0 58 63.8
BcaC04g22592 Brassica carinata HOM05D001498 ORTHO05D019943 3.0e-12 75.1 50 70.0
BcaC07g38655 Brassica carinata HOM05D001498 ORTHO05D011448 8.8e-12 73.6 90 54.4
BcaB06g26019 Brassica carinata HOM05D001498 ORTHO05D091241 2.5e-11 72.0 66 56.1
A08p08110 Brassica napus HOM05D001498 ORTHO05D011448 5.7e-11 70.9 100 48.0
BcaB01g03193 Brassica carinata HOM05D000627 ORTHO05D011138 9.7e-11 70.1 73 53.4
BcaC01g06537 Brassica carinata HOM05D001498 ORTHO05D011448 2.2e-10 68.9 62 56.5
BcaC09g51129 Brassica carinata HOM05D001498 ORTHO05D032596 2.8e-10 68.6 40 77.5
BcaB07g32912 Brassica carinata HOM05D001498 ORTHO05D095626 3.7e-10 68.2 52 63.5
BcaB06g27274 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-09 65.9 73 52.1
BcaC05g28432 Brassica carinata HOM05D001498 ORTHO05D016036 3.1e-09 65.1 55 56.4
BraA01t01982Z Brassica rapa HOM05D001498 ORTHO05D013028 2.0e-08 62.4 119 39.5
BcaC08g43732 Brassica carinata HOM05D001498 ORTHO05D008559 3.4e-08 61.6 70 50.0
C02p53480 Brassica napus HOM05D001498 ORTHO05D011448 5.9e-08 60.8 58 51.7
BcaC01g03920 Brassica carinata HOM05D001498 ORTHO05D091853 1.7e-07 59.3 36 69.4
BcaC05g26791 Brassica carinata HOM05D001498 ORTHO05D013028 1.4e-06 56.2 48 54.2


User provided reference genes

Program Settings