Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g33060 Brassica carinata HOM05D000975 ORTHO05D017505 2.3e-79 298.9 155 100.0
BcaB03g16444 Brassica carinata HOM05D000975 ORTHO05D003128 3.9e-63 245.0 146 88.4
BcaB08g35181 Brassica carinata HOM05D000975 ORTHO05D003128 6.6e-63 244.2 146 86.3
BcaB02g11058 Brassica carinata HOM05D000975 ORTHO05D003128 1.2e-59 233.4 146 84.9
BcaB05g21809 Brassica carinata HOM05D000975 ORTHO05D003128 9.9e-59 230.3 171 74.9
BcaB01g01398 Brassica carinata HOM05D000975 ORTHO05D003128 2.5e-38 162.5 169 58.6
BolC8t48484H Brassica oleracea HOM05D000975 ORTHO05D032563 3.2e-33 145.6 100 76.0
BcaC07g38076 Brassica carinata HOM05D000975 ORTHO05D017505 2.7e-32 142.5 84 85.7
BcaB08g35626 Brassica carinata HOM05D000975 ORTHO05D003128 2.3e-31 139.4 157 55.4
BcaB04g17404 Brassica carinata HOM05D000975 ORTHO05D000421 1.9e-30 136.3 78 88.5
BcaB08g35321 Brassica carinata HOM05D000975 ORTHO05D003128 3.3e-30 135.6 84 81.0
BcaC02g09150 Brassica carinata HOM05D000975 ORTHO05D003128 9.6e-30 134.0 261 37.5
C05p33160 Brassica napus HOM05D000975 ORTHO05D000395 1.3e-29 133.7 262 37.4
C02p44170 Brassica napus HOM05D000975 ORTHO05D032563 2.1e-29 132.9 100 70.0
BcaB03g16188 Brassica carinata HOM05D000975 ORTHO05D003128 2.8e-29 132.5 236 39.4
C02p32260 Brassica napus HOM05D000975 ORTHO05D000395 2.8e-29 132.5 262 38.2
C07p11490 Brassica napus HOM05D000975 ORTHO05D000395 2.8e-29 132.5 263 37.3
C08p14240 Brassica napus HOM05D000975 ORTHO05D003128 8.1e-29 131.0 263 36.9
C02p09970 Brassica napus HOM05D000975 ORTHO05D003128 1.1e-28 130.6 263 36.9
C04p57190 Brassica napus HOM05D000975 ORTHO05D003128 1.1e-28 130.6 262 37.0
A09p31720 Brassica napus HOM05D000975 ORTHO05D000395 1.4e-28 130.2 263 36.9
C04p20970 Brassica napus HOM05D000975 ORTHO05D000395 1.4e-28 130.2 263 36.9
A01p28010 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-27 127.1 274 36.1
A01p29590 Brassica napus HOM05D000975 ORTHO05D000395 2.6e-27 125.9 274 36.1
C09p26460 Brassica napus HOM05D000975 ORTHO05D000395 2.6e-27 125.9 264 37.5
BcaC06g36141 Brassica carinata HOM05D000975 ORTHO05D003128 4.5e-27 125.2 273 35.2
C07p07340 Brassica napus HOM05D000975 ORTHO05D000395 4.5e-27 125.2 273 35.2
A06p21900 Brassica napus HOM05D000975 ORTHO05D003128 5.8e-27 124.8 274 35.8
A07p02250 Brassica napus HOM05D000975 ORTHO05D003128 5.8e-27 124.8 274 35.8
BcaC06g34163 Brassica carinata HOM05D000975 ORTHO05D003128 4.9e-26 121.7 239 38.5
BcaB03g16067 Brassica carinata HOM05D000975 ORTHO05D003128 4.6e-24 115.2 260 34.6
C02p51060 Brassica napus HOM05D000975 ORTHO05D000395 2.3e-23 112.8 242 36.0
BcaB01g01115 Brassica carinata HOM05D000975 ORTHO05D003128 5.1e-23 111.7 71 80.3
C09p39100 Brassica napus HOM05D000975 ORTHO05D018701 8.7e-23 110.9 139 47.5
BolC9t56790H Brassica oleracea HOM05D000975 ORTHO05D018701 8.7e-23 110.9 139 47.5
C01p26870 Brassica napus HOM05D000975 ORTHO05D000421 1.3e-21 107.1 82 70.7
C07p21340 Brassica napus HOM05D000975 ORTHO05D003128 1.3e-21 107.1 82 70.7
BolC9t56171H Brassica oleracea HOM05D000975 ORTHO05D000395 1.6e-21 106.7 150 43.3
BcaC08g44256 Brassica carinata HOM05D000975 ORTHO05D003128 3.7e-21 105.5 152 45.4
BcaC03g14807 Brassica carinata HOM05D000975 ORTHO05D000395 6.2e-21 104.8 123 51.2
BcaC04g20797 Brassica carinata HOM05D000975 ORTHO05D003128 8.2e-21 104.4 90 62.2
C04p40840 Brassica napus HOM05D000975 ORTHO05D003128 8.2e-21 104.4 150 42.0
C09p33350 Brassica napus HOM05D000975 ORTHO05D000421 8.2e-21 104.4 117 53.0
BolC6t35806H Brassica oleracea HOM05D000975 ORTHO05D003128 8.2e-21 104.4 115 53.0
C04p15960 Brassica napus HOM05D000975 ORTHO05D018701 1.4e-20 103.6 82 68.3
BolC4t24346H Brassica oleracea HOM05D000975 ORTHO05D000421 1.4e-20 103.6 150 42.0
C07p26080 Brassica napus HOM05D000975 ORTHO05D000395 1.8e-20 103.2 244 34.4
BcaB02g10294 Brassica carinata HOM05D000975 ORTHO05D003128 4.0e-20 102.1 147 44.2
A01p33200 Brassica napus HOM05D000975 ORTHO05D000395 4.0e-20 102.1 81 66.7
A03p64300 Brassica napus HOM05D000975 ORTHO05D000395 4.0e-20 102.1 81 66.7
A06p20320 Brassica napus HOM05D000975 ORTHO05D000395 4.0e-20 102.1 81 66.7
BraA03t14846Z Brassica rapa HOM05D000975 ORTHO05D000395 4.0e-20 102.1 81 66.7
C06p29680 Brassica napus HOM05D000975 ORTHO05D000395 5.3e-20 101.7 81 66.7
BcaC02g11383 Brassica carinata HOM05D000975 ORTHO05D003128 6.9e-20 101.3 115 52.2
BcaC04g22080 Brassica carinata HOM05D000975 ORTHO05D003128 6.9e-20 101.3 117 51.3
A05p27740 Brassica napus HOM05D000975 ORTHO05D000395 6.9e-20 101.3 81 66.7
C09p23710 Brassica napus HOM05D000975 ORTHO05D003128 6.9e-20 101.3 117 51.3
BraA03t15342Z Brassica rapa HOM05D000975 ORTHO05D000395 6.9e-20 101.3 81 66.7
BraA04t17237Z Brassica rapa HOM05D000975 ORTHO05D000395 6.9e-20 101.3 81 66.7
BraA08t32982Z Brassica rapa HOM05D000975 ORTHO05D000395 6.9e-20 101.3 81 66.7
A02p27510 Brassica napus HOM05D000975 ORTHO05D000395 9.0e-20 100.9 81 65.4
A09p24170 Brassica napus HOM05D000975 ORTHO05D000395 1.2e-19 100.5 81 65.4
C01p40940 Brassica napus HOM05D000975 ORTHO05D000395 2.0e-19 99.8 81 65.4
BcaC05g27533 Brassica carinata HOM05D000975 ORTHO05D003128 2.6e-19 99.4 116 51.7
A03p63350 Brassica napus HOM05D000975 ORTHO05D000395 3.4e-19 99.0 252 33.7
A08p14800 Brassica napus HOM05D000975 ORTHO05D000395 1.0e-18 97.4 81 65.4
C02p45160 Brassica napus HOM05D000975 ORTHO05D000395 1.0e-18 97.4 81 64.2
BolC2t09401H Brassica oleracea HOM05D000975 ORTHO05D000395 1.0e-18 97.4 94 57.4
BcaC02g10515 Brassica carinata HOM05D000975 ORTHO05D003128 1.7e-18 96.7 79 65.8
BcaC02g10880 Brassica carinata HOM05D000975 ORTHO05D000421 2.2e-18 96.3 79 65.8
A05p23650 Brassica napus HOM05D000975 ORTHO05D017505 5.0e-18 95.1 76 68.4
BraA05t21233Z Brassica rapa HOM05D000975 ORTHO05D017505 5.0e-18 95.1 76 68.4
A06p23370 Brassica napus HOM05D000975 ORTHO05D000395 5.5e-17 91.7 69 68.1
C04p51480 Brassica napus HOM05D000975 ORTHO05D000421 5.5e-17 91.7 118 47.5
BraA02t07581Z Brassica rapa HOM05D000975 ORTHO05D003128 5.5e-17 91.7 109 49.5
C07p32020 Brassica napus HOM05D000975 ORTHO05D003128 7.1e-17 91.3 123 43.1
BolC5t32460H Brassica oleracea HOM05D000975 ORTHO05D003128 7.1e-17 91.3 77 64.9
C09p43970 Brassica napus HOM05D000975 ORTHO05D003128 1.6e-16 90.1 90 54.4
BcaC02g08706 Brassica carinata HOM05D000975 ORTHO05D003128 2.7e-16 89.4 79 60.8
C02p44870 Brassica napus HOM05D000975 ORTHO05D000395 2.7e-16 89.4 66 71.2
BcaB03g16257 Brassica carinata HOM05D000975 ORTHO05D003128 4.6e-16 88.6 184 41.8
BolC5t32044H Brassica oleracea HOM05D000975 ORTHO05D003128 6.1e-16 88.2 79 59.5
BcaB04g17402 Brassica carinata HOM05D000975 ORTHO05D017505 7.9e-16 87.8 51 88.2
BcaB02g11446 Brassica carinata HOM05D000975 ORTHO05D003128 1.0e-15 87.4 59 72.9
C03p87740 Brassica napus HOM05D000975 ORTHO05D003128 1.3e-15 87.0 120 42.5
BraA09t38303Z Brassica rapa HOM05D000975 ORTHO05D003128 1.8e-15 86.7 113 46.0
BcaC04g20350 Brassica carinata HOM05D000975 ORTHO05D003128 3.0e-15 85.9 79 57.0
BcaC04g22998 Brassica carinata HOM05D000975 ORTHO05D000395 3.9e-15 85.5 152 41.4
A06p27630 Brassica napus HOM05D000975 ORTHO05D003128 5.1e-15 85.1 86 53.5
A06p32980 Brassica napus HOM05D000975 ORTHO05D003128 5.1e-15 85.1 86 54.7
BolC1t04213H Brassica oleracea HOM05D000975 ORTHO05D003128 5.1e-15 85.1 123 42.3
A08p09910 Brassica napus HOM05D000975 ORTHO05D003128 6.7e-15 84.7 113 44.2
BraA02t07023Z Brassica rapa HOM05D000975 ORTHO05D003128 6.7e-15 84.7 113 44.2
BcaB04g17865 Brassica carinata HOM05D000975 ORTHO05D003128 1.1e-14 84.0 68 66.2
BraA09t37348Z Brassica rapa HOM05D000975 ORTHO05D003128 1.1e-14 84.0 79 57.0
A09p29810 Brassica napus HOM05D000975 ORTHO05D003128 1.5e-14 83.6 120 43.3
C09p13190 Brassica napus HOM05D000975 ORTHO05D003128 9.7e-14 80.9 78 56.4
BraA03t14435Z Brassica rapa HOM05D000975 ORTHO05D003128 9.7e-14 80.9 79 55.7
BcaC05g25477 Brassica carinata HOM05D000975 ORTHO05D003128 2.4e-12 76.3 84 50.0
BcaB03g16068 Brassica carinata HOM05D000975 ORTHO05D003128 5.3e-12 75.1 83 50.6
BcaC03g15679 Brassica carinata HOM05D000975 ORTHO05D003128 9.0e-12 74.3 107 43.0
BolC4t25133H Brassica oleracea HOM05D000975 ORTHO05D000395 1.5e-11 73.6 128 36.7
BcaC02g09820 Brassica carinata HOM05D000975 ORTHO05D003128 4.5e-11 72.0 98 39.8
BcaC03g14228 Brassica carinata HOM05D000975 ORTHO05D003128 1.1e-09 67.4 81 44.4
BcaB08g35625 Brassica carinata HOM05D000975 ORTHO05D003128 1.9e-09 66.6 81 50.6
BraSC36t46029Z Brassica rapa HOM05D000975 ORTHO05D003128 1.9e-09 66.6 113 38.1
BcaC03g14966 Brassica carinata HOM05D000975 ORTHO05D003128 2.5e-09 66.2 66 54.5
A02p27520 Brassica napus HOM05D000975 ORTHO05D000395 2.5e-09 66.2 91 38.5
BraA02t07781Z Brassica rapa HOM05D000975 ORTHO05D012203 2.5e-09 66.2 91 38.5
BcaC03g15228 Brassica carinata HOM05D000975 ORTHO05D003128 3.2e-09 65.9 74 55.4
A06p27610 Brassica napus HOM05D000975 ORTHO05D012203 4.2e-09 65.5 91 38.5
BcaB04g18228 Brassica carinata HOM05D000975 ORTHO05D003128 5.5e-09 65.1 81 49.4
A01p14490 Brassica napus HOM05D000975 ORTHO05D012203 5.5e-09 65.1 91 37.4
A05p31250 Brassica napus HOM05D000975 ORTHO05D040378 5.5e-09 65.1 67 53.7
BolC6t38531H Brassica oleracea HOM05D000975 ORTHO05D012203 5.5e-09 65.1 91 37.4
BraA01t03431Z Brassica rapa HOM05D000975 ORTHO05D012203 5.5e-09 65.1 91 37.4
BcaB05g21808 Brassica carinata HOM05D000975 ORTHO05D003128 7.2e-09 64.7 181 30.9
BcaNung04170 Brassica carinata HOM05D000975 ORTHO05D003128 7.2e-09 64.7 104 32.7
A09p29880 Brassica napus HOM05D000975 ORTHO05D003128 7.2e-09 64.7 90 37.8
BcaC02g09151 Brassica carinata HOM05D000975 ORTHO05D003128 9.4e-09 64.3 91 37.4
BcaC06g34162 Brassica carinata HOM05D000975 ORTHO05D003128 9.4e-09 64.3 87 37.9
A01p29580 Brassica napus HOM05D000975 ORTHO05D000421 9.4e-09 64.3 87 37.9
A07p05600 Brassica napus HOM05D000975 ORTHO05D003128 9.4e-09 64.3 91 37.4
A10p04880 Brassica napus HOM05D000975 ORTHO05D012203 9.4e-09 64.3 87 37.9
C07p07360 Brassica napus HOM05D000975 ORTHO05D003128 9.4e-09 64.3 91 37.4
BolC4t25468H Brassica oleracea HOM05D000975 ORTHO05D012203 9.4e-09 64.3 91 37.4
BcaB04g18231 Brassica carinata HOM05D000975 ORTHO05D000421 1.2e-08 63.9 82 45.1
A06p21920 Brassica napus HOM05D000975 ORTHO05D012203 1.2e-08 63.9 87 37.9
C09p28670 Brassica napus HOM05D000975 ORTHO05D012203 1.6e-08 63.5 124 34.7
C07p11520 Brassica napus HOM05D000975 ORTHO05D012203 2.1e-08 63.2 91 37.4
BraA03t14844Z Brassica rapa HOM05D000975 ORTHO05D012203 2.1e-08 63.2 91 36.3
A07p02240 Brassica napus HOM05D000975 ORTHO05D003128 2.7e-08 62.8 83 38.6
BraA02t07584Z Brassica rapa HOM05D000975 ORTHO05D012203 2.7e-08 62.8 91 37.4
BraA03t15344Z Brassica rapa HOM05D000975 ORTHO05D012203 2.7e-08 62.8 91 37.4
BcaC03g15684 Brassica carinata HOM05D000975 ORTHO05D003128 3.6e-08 62.4 90 43.3
C04p20990 Brassica napus HOM05D000975 ORTHO05D000395 3.6e-08 62.4 91 36.3
BraA01t03437Z Brassica rapa HOM05D000975 ORTHO05D012203 4.6e-08 62.0 78 42.3
A03p63360 Brassica napus HOM05D000975 ORTHO05D003128 6.1e-08 61.6 75 42.7
A06p20330 Brassica napus HOM05D000975 ORTHO05D003128 6.1e-08 61.6 77 37.7
BolC5t32445H Brassica oleracea HOM05D000975 ORTHO05D003128 6.1e-08 61.6 90 36.7
A09p29840 Brassica napus HOM05D000975 ORTHO05D000395 7.9e-08 61.2 91 36.3
C02p28110 Brassica napus HOM05D000975 ORTHO05D003128 1.0e-07 60.8 99 38.4
BraA03t15444Z Brassica rapa HOM05D000975 ORTHO05D003128 1.0e-07 60.8 91 36.3
BcaC06g35755 Brassica carinata HOM05D000975 ORTHO05D003128 1.4e-07 60.5 99 38.4
BolC2t08855H Brassica oleracea HOM05D000975 ORTHO05D000395 1.4e-07 60.5 77 46.8
BcaC09g50298 Brassica carinata HOM05D000975 ORTHO05D003128 1.8e-07 60.1 99 37.4
BolC7t41598H Brassica oleracea HOM05D000975 ORTHO05D000395 1.8e-07 60.1 77 46.8
A01p28030 Brassica napus HOM05D000975 ORTHO05D000395 3.0e-07 59.3 91 35.2
C04p28020 Brassica napus HOM05D000975 ORTHO05D003128 5.1e-07 58.5 72 48.6
BraA08t33465Z Brassica rapa HOM05D000975 ORTHO05D040378 6.7e-07 58.2 56 55.4
C05p35150 Brassica napus HOM05D000975 ORTHO05D017505 8.8e-07 57.8 43 67.4
C07p25800 Brassica napus HOM05D000975 ORTHO05D003128 1.1e-06 57.4 72 47.2
A06p33000 Brassica napus HOM05D000975 ORTHO05D003128 1.5e-06 57.0 81 39.5
BolC3t20043H Brassica oleracea HOM05D000975 ORTHO05D003128 2.0e-06 56.6 77 44.2
BcaC04g20351 Brassica carinata HOM05D000975 ORTHO05D003128 2.5e-06 56.2 75 40.0
BcaC07g37493 Brassica carinata HOM05D000975 ORTHO05D003128 3.3e-06 55.8 99 36.4
C04p36240 Brassica napus HOM05D000975 ORTHO05D003128 3.3e-06 55.8 73 46.6
BcaC06g34842 Brassica carinata HOM05D000975 ORTHO05D003128 5.7e-06 55.1 99 36.4
C02p34180 Brassica napus HOM05D000975 ORTHO05D003128 5.7e-06 55.1 77 44.2
BolC1t02631H Brassica oleracea HOM05D000975 ORTHO05D017505 7.4e-06 54.7 34 79.4
BolC4t25160H Brassica oleracea HOM05D000975 ORTHO05D003128 7.4e-06 54.7 34 79.4
BcaC02g11384 Brassica carinata HOM05D000975 ORTHO05D000395 9.7e-06 54.3 72 45.8


User provided reference genes

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