Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 2.5e-68 262.3 165 100.0
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 6.4e-56 221.1 165 82.4
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 8.6e-53 210.7 125 88.8
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 4.6e-38 161.8 83 98.8
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 1.7e-32 143.3 84 88.1
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 8.7e-29 131.0 137 56.2
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 2.5e-28 129.4 137 56.9
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 7.3e-28 127.9 138 56.5
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 1.3e-27 127.1 92 79.3
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 1.3e-27 127.1 138 55.8
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 2.1e-27 126.3 165 53.3
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 3.6e-27 125.6 137 54.7
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 1.4e-26 123.6 134 58.2
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 2.4e-26 122.9 121 62.0
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 3.1e-26 122.5 121 62.0
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 4.0e-26 122.1 116 61.2
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 5.3e-26 121.7 121 61.2
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 6.9e-26 121.3 121 62.0
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 9.0e-26 120.9 180 47.8
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 2.0e-25 119.8 136 57.4
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 3.4e-25 119.0 119 61.3
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-25 118.6 121 60.3
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 5.8e-25 118.2 136 55.9
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 7.6e-25 117.9 172 55.2
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 9.9e-25 117.5 134 55.2
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 1.3e-24 117.1 133 55.6
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 1.3e-24 117.1 129 57.4
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-24 117.1 121 59.5
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 3.8e-24 115.5 128 57.0
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 6.4e-24 114.8 115 60.9
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 6.4e-24 114.8 115 60.9
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 8.4e-24 114.4 133 54.9
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 8.4e-24 114.4 131 57.3
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 8.4e-24 114.4 114 61.4
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 1.1e-23 114.0 114 61.4
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 1.4e-23 113.6 121 58.7
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 1.4e-23 113.6 127 56.7
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 1.4e-23 113.6 127 56.7
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 2.4e-23 112.8 115 60.0
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 3.2e-23 112.5 112 61.6
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 3.2e-23 112.5 110 60.0
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 4.2e-23 112.1 114 60.5
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 7.1e-23 111.3 114 60.5
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 1.2e-22 110.5 134 53.7
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 1.2e-22 110.5 114 60.5
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 2.7e-22 109.4 110 61.8
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 7.9e-22 107.8 112 58.9
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 7.9e-22 107.8 113 56.6
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 7.9e-22 107.8 130 54.6
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-21 106.7 110 58.2
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 2.3e-21 106.3 115 58.3
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 2.3e-21 106.3 130 53.8
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 3.9e-21 105.5 127 54.3
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 3.9e-21 105.5 127 54.3
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 6.7e-21 104.8 125 56.0
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 6.7e-21 104.8 129 53.5
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 6.7e-21 104.8 123 57.7
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 6.7e-21 104.8 127 53.5
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 1.5e-20 103.6 125 52.8
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 1.9e-20 103.2 87 64.4
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 2.5e-20 102.8 124 54.0
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 7.4e-20 101.3 135 45.9
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 7.4e-20 101.3 85 63.5
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 7.4e-20 101.3 124 53.2
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 1.6e-19 100.1 86 61.6
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 2.1e-19 99.8 134 45.5
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 2.8e-19 99.4 84 64.3
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 4.8e-19 98.6 85 62.4
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 8.1e-19 97.8 103 66.0
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 1.8e-18 96.7 134 48.5
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 2.4e-18 96.3 85 61.2
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 2.4e-18 96.3 125 49.6
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 5.3e-18 95.1 103 55.3
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 6.9e-18 94.7 85 60.0
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 1.5e-17 93.6 130 56.2
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 2.6e-17 92.8 85 58.8
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 2.6e-17 92.8 104 56.7
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 7.6e-17 91.3 86 52.3
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 7.6e-17 91.3 127 52.8
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 9.9e-17 90.9 80 63.8
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 1.7e-16 90.1 89 58.4
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 1.7e-16 90.1 104 56.7
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 2.2e-16 89.7 77 64.9
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 2.2e-16 89.7 86 65.1
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 1.1e-15 87.4 101 58.4
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 1.4e-15 87.0 113 52.2
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 1.9e-15 86.7 86 52.3
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 2.4e-15 86.3 76 60.5
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 2.4e-15 86.3 73 64.4
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 4.2e-15 85.5 69 65.2
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 4.2e-15 85.5 82 53.7
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 5.5e-15 85.1 121 51.2
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 7.1e-15 84.7 86 50.0
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 9.3e-15 84.3 77 53.2
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 9.3e-15 84.3 114 51.8
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 9.3e-15 84.3 86 51.2
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 1.2e-14 84.0 119 44.5
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 1.2e-14 84.0 82 52.4
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 2.1e-14 83.2 86 51.2
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 2.7e-14 82.8 44 95.5
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 2.7e-14 82.8 86 48.8
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 1.3e-13 80.5 76 53.9
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 2.3e-13 79.7 86 47.7
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 3.9e-13 79.0 96 55.2
BcaB03g16423 Brassica carinata HOM05D001498 ORTHO05D091575 6.7e-13 78.2 113 47.8
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 8.7e-13 77.8 68 57.4
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 1.9e-12 76.6 86 50.0
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 1.9e-12 76.6 73 53.4
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 3.3e-12 75.9 77 49.4
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 3.3e-12 75.9 87 50.6
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 4.3e-12 75.5 87 50.6
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-11 73.9 86 57.0
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 2.1e-11 73.2 52 71.2
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 4.8e-11 72.0 83 50.6
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 6.2e-11 71.6 79 48.1
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 1.4e-10 70.5 75 48.0
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 5.3e-10 68.6 75 46.7
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 2.6e-09 66.2 87 48.3
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 2.6e-09 66.2 78 48.7
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 2.6e-09 66.2 76 57.9
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 2.2e-08 63.2 52 57.7
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 6.5e-08 61.6 63 49.2
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 8.4e-08 61.2 72 44.4
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 1.4e-07 60.5 54 59.3
BcaB07g33140 Brassica carinata HOM05D015118 ORTHO05D019993 5.5e-07 58.5 67 47.8
BcaC06g35064 Brassica carinata HOM05D001498 ORTHO05D016694 2.7e-06 56.2 54 51.9
C07p13940 Brassica napus HOM05D001379 ORTHO05D001277 6.0e-06 55.1 57 45.6


User provided reference genes

Program Settings